XLOC_021855 (gene) - C. hemisphaerica

Overview
NameXLOC_021855
Unique NameXLOC_021855
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001550:17912..21981-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021855 ID=XLOC_021855|Name=XLOC_021855|organism=Clytia hemisphaerica|type=gene|length=4070bp|location=Sequence derived from alignment at sc0001550:17912..21981- (Clytia hemisphaerica)
GAAAGTTCGGTGTCACCTGAATTGGTTAATAATAATGAAGTTTACGGTAA
CTTGATATACATGGTTTTAATTATTATTAAAGTCTTCTTTTTTACCTTAC
TTAGCAGGGTGGCGCTAGAAAAGTTGAATTCTGAAGGAAAGTTTTTCAAA
ATATTTTGTAACATCAAAATTATGGATACGTTTCAAAAATGATATCAATT
CTAATGAAGCTGTTATTGTTATACCGCCGTTTTTTTTTATTCTAGGCCCA
ATCTTTGACGAAAGTTTGGTGTCACCTGAATTGGTTAATAATAATGAAGT
TTACGGTAACTTGATATACATGGTTTTGCCCTTACCTTTAAAATAAGCAC
TGATAAATGTCTTTTGAAAATAAGTAGGCANCCCCCCCTAAACCCTCGAA
AAAAATTTGGAACCCCCCCCCTAGAATCCTCTCCCCCCCTCTAGTAGATA
CTTTATGACCACTCCCTAATTTGATAAACTTCTTTTTACCTTCACTTAGT
TACTTAGGGTTAGCTTGAAAGAAGTCCACTTCTTGAGAAAGGTTTTTTCA
ATCGAATTTTTGGAAAATTTCAATATGTAAATACATAAAGTCAACAGGTC
TGGTCAGATAATTTTTCTTTTGTTAGCAGAGAGTGTAATTTAAATTGAGC
CTTCATTGTGCATGATGTCAGTTTTGTTTTATGTTATGGGTATGGTATGA
GTTAAGCCTTCGTGCATCTTTGGGGGAGGGGGCAAATAGGCCTCCCTAAA
CAAAAATTTGTGATAATTTTTGTAAGACTTGTCAAATTGACAATTCATAT
TATTTTGTTTTGCTCAAATTTTGTGTGGTAGCTCCATATAACATATAATT
TTGGGGCTGGGGGTCAATTTTTTGTCACTTAATGTATAGGTGTATTTTAC
AGACCGGCCTTTTTAGGCTAATTTTGGCCTAAATTTTCATATCTTAGGAT
TGAGAAATGGTAATGACTTGAAAATTAGAACATTGTGAGAATTCACTTAG
GTTAAAAGTATTTTACAATTGGGCCTACAAGTAACTTTAAAAATACTGAA
GTTGTGGTTAGCACATTCGACAGTTTAGCAATCAAGGTAAAATACTGACT
GGTCTGTAAAATACCAACCACGCAGGTGGCCGAACTAAAATTCTGCACAT
TGTCTTAGATCACTAAGACCTACAACTGGTGAAAATTTCGAGTCAAAAGC
TTCAGTAGTTTCTGAGTTCCGAAGGAGGTGTCTTTTACGGACCGGTCAGT
AAAGTACTAAATTATGATGGGACCAACTTTTTTCGTCACCTTTCACTTTT
TTTGAAAAAGTAGCCCTCAGGAGCAAATTTTAGCCCAAAATTACCATTTT
TACCTTACTTAGAGCAGGGTTGGCGCCTATTTTTCAAAACAGTTTTTCCA
AATATTTTGTAACATCAAAATTATGGATACGTTTCAAAAATGATATCAAT
TCTAGTGAAGCTGTTATTGTTATACCGCCGTTTTTTTTATTCTAGGCCCA
ATCGTTGACGAAAGTTCGATGTCACCTGAATTGGTTAATAATAATGAAGT
TTACGGTAACTTGATATACATGGTTTTGCCCTTACCTTTAAAATAAGCAC
TGATAAATGTCTTTTGAAAATAAGTAGGCAAAAATAGGGGGTGTTGTAAT
ATACTTCTTAAAAAGCCATATTCGTCCAGGAGCTTAAGTTCCAAGTCAGT
TTTCAATGGTTTCGATTCTTATCTTGCTATATACTATCGCCAGAGCTTTT
CTGTGTTCACTAACAGCTATAACGGCGCATGACGCTAGGCACCAGCTAGT
TTTCTATATACCTTACGTTTCAGGGGCAAGAATAAAGTTAATCATATCTT
CATTTAAAATTTGCATTTTAACAGATAATTTTCCTTTACAGATGATGCAG
CAAATGGAGAGCAAGTGGTTGATTTGATTGACCTTGTTGAAGACATTGAG
TAAGTTTGTTTTATGATTTTTTCAACTTAAGTTTAGTGGAGCTAGAATCT
GAACTTTTCTGACTGTCTATCGATCTGGCAAGAAAACTATTTTCCTCCCC
CTTTGCTTGCCGAAGGAGCTGTTTTATAAAAATTTTCCGAAATAGTAAAA
AGAAAAGGCATCTTTCTCACCAAATTTATTTGCAACTAATAAGCTAATAG
TATACAGTTAGTGCAGGCTCGTGTATCAAAAAAGCTTCTCGTGTGCACAG
ATTTGTTACAAGCAAACTAACTTTTGATCTGATGCCCTGACCCCTCAAGG
ATCAAGAAAATCTTGGGTTACAAAATTCTAACAACCCTGTTGCCATGGAA
AATGACGTCATTGGTTACCATAGCAACAAAAAATTAAAGTTGAGCGAAAA
TTTTTTGAATTTTGACAATTTTTCATTTTTCGATGACGTCATCATTTATG
ACGTCATAATGCTTTATTTCCTTAATATATGAGAGATATATGCATTTTCA
GAGATATAAGTTGTGACCTTTTTCTTTACCAGTTTTTCATGCTCTTTCGA
ATGGACCAAAAATTTTTTGAATTTGACGACTTTAATTTTTTTTTGTCTTT
TTATCCCCTCGTTTATTTTGACCCATCCGTTTATCAGGTNAATTTGACGA
CTTTAATTTTTTTTTGTCTTTTTATCCCCTCGTTTATTTTGACCCCTCCG
TTTATCAGGTACTCACGTTTTGTTTTATTTAACAATCTTAAAGAAAATAT
TTCATTGCTTTTAGTGTGACAATTCGTCTGAGGAGATCCACATTGCCAGA
AGATATGTTACAAGGATTTGCCAACGTAAACATAAGATCGAAAATCCAAT
TCAAACTTATCGATTGTACAGGCAAAGAAGAAACTGGAGAAGGTATTGGC
GTTGTTCGTGATGCTTACACTTCATTCTGGAGAGAAATTTTGGACATAAG
ATTTTTAGGCAACATGCAAAGAGTTCGTTGTTCATGACTACTTCGTCGAA
GAATGGACAACTATTGGATTAATCTTAGTAAAAGGGTTTCTAGATTGTGG
CTATTTTCCACTCACTCTATGCAAGGCTTTTGTGATCAATTGTTTGTTTG
GTGACGAGAGTTTGCCAGACAAAATGCTTTTAGATGCATTTTTGGAGTAT
ATCAGCAAAACTGAAGAAAGGTTGGTATCGAGTGCTTTGACAGCGGGCCA
AACATGAAATGTATTCGACGACGAATTTTTTCAGAACATTCTGGATGGTC
CTGGATAGATATCGATGCAGAACGAAGGTATCGTGCATGAATGTTTACGG
GGTGTTTTTGGAGCTAGCTAGGCAAGAGTTAGTGCAAAAACCCTATCTTA
TGGTATGTACATGGAAAAACACTCTCACGCCACTTAAAAAAAAATTGCCA
GATGCCAAAGCTGTAGAGGATCTTTATTCATCCATGGAGCCAACCAACAT
GAAGGTAGTGAGACTGTTACAAAATGAACCTAAAAGTTTGGCTGAACGAG
ATGTGTTTTCTTACTTGAAAGAATATGTAATGAATCTGGAAATGAACGCC
TTGAAAAACTTTCTTTACTTTACAACGGGAGCTGACGTAGTACTTGTCTC
AAAAATTGAAATTTCTTTCATCGCATTTGCAACCAGATCACAACGTAGAC
CCATTGCTCATACATGTGCTCCGTTATTGGAAATATCTGCCGCATATACT
TCCTTCCCGGATTTGCGTGACGAATTTAATAGAGTTCTTGCTAGAACTGA
CTGGGGAATGGATATGGCCTGAATAACTGAACTTTAAAACGATAGAGATC
ATTTTTAAAACTTTTTTAATACTCTTGATGTTATTTGTCTTAGTTTTTAC
AGCACATCCGTTTGAAAGTGTAACTATTTGAAAAAAAGACATCTACCTTC
GTGGTTTTGACATTTTGTTGATAGTAAATTTTAACCAATACTGGCCGTTT
CAATTTGACTTCTTATGTTTGTATTGGATGGTTTGTATCTTAACGATAGG
TTATTTTTCCTGTTGAGATACATTTTTTTTATTTTGTGGGAGTGCCTATT
CAGTTAATCTTAGGTTTAAGCTTAAAAGATTGTTTAATCCTTTGGTAATG
TGAGATATCTCAGAATATAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036992TCONS_00036992Clytia hemisphaericatranscript
TCONS_00036991TCONS_00036991Clytia hemisphaericatranscript
TCONS_00036990TCONS_00036990Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036992-proteinTCONS_00036992-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001550supercontigsc0001550:17912..21981 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.49	0.39	0.07	0.03	2.56	1.66	2.08	2.22	1.05	0.89	1.15	1.74	0.72	0.67	1.08	1.57	0.56	1	0.92	0.69	0.55	1	1.03	0.95	0.77	0.61	1.09	1	3.59	3.23