XLOC_021808 (gene) - C. hemisphaerica

Overview
NameXLOC_021808
Unique NameXLOC_021808
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001535:3492..8374-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021808 ID=XLOC_021808|Name=XLOC_021808|organism=Clytia hemisphaerica|type=gene|length=4883bp|location=Sequence derived from alignment at sc0001535:3492..8374- (Clytia hemisphaerica)
AAAACTTGCTTTCCTATCCCGTAAGGAAAGAAAGTAGCTTTATTATAATT ACCTCTTCACATTTTTTTACTCTTCACCTCCATATTGCAGATCTAAATAA AAAAAGCAAAACTGAAAATATGGAAGCACCAACAATTTCACACGTCTATT CAGCCATTGATACACTCTATCACTCTAGCCAAGTAGAAGGTAAAGAAGAA GCTTCAAAATGGCTAGAGAAATTCCAAAAATCGGTATGTTGCACTTATAT TGTTATTCTTGCTTGGCTTACAGATTTTAAAGTTAATATTTTGATAGTCT CACTTGATTATGGTGGCCTACAGAGACATTATAGCGATATAATTAATTAG CTGATCGAAAAACAGTAAAAAAGCTCAATTAAATTTGAATTTACTTTCAT TGAATAATCCACATCTTTGCCCTAATTATTGTCCTTCTCGGCCATGAAGT GATTTTTTTTCAATTCATTTTGAATTTAATTTAATTCAGTTGTATTCAGC TTTTGTGTTGTATTCTAATCAGAAATTTACTTTATAGGATTTCTTAAATA CTTAATGTTGTTCTTGCTTTGCTTAAATTAAAGATTTAAAGTGAATATTT TGATAGTCTTATTTGACTCCTTATGAAATACACAAAACTTTTTAGTTGTA TTCAACTCTTGTGTTGTATTCTAATCCGAAATTAACTTTGTAGCATTTTT AAGATTTAAAAATATTTTTTTCCATTTTATTACAGTTGTATGCTTGGGAA ATTTGTGACCAACTTCTTCGAGAAAACCGTGATAAAGAGTCACAATATTT TGCTGCACAAACAATGAAAACTAAAGTATTCTTTCTTTATAATATTTACA AAAATTGTTTTTTATGATCTAATTCTTTGTGAACTTTATTATAATCTCTA GTCTCTTTTGCAGCCAATCTTGGCTTAAAGTTGATTGGTCTAAAATTGAC TTTCAGAGATAAACCTTTATTGTAAAATCTCAGTTTTCTAAAAGGCATTT TGGCTTAATTTAAAGTATTTCAGCCCTATCGCATGTTGGCCTAAGCTCAT GAAACGGCCTCTTTCAGAAATGAAGAAGAATGCTTTAAGTTTGTTACAAG CGAGTTTTTATTTCGAGCTAATTGCTTATTATTAGTTGCTTTTATTTGTT TTCACCACAGTTCATGTTTTTCTCTCTTTTTTATAGATTCAGCATCATTT CTCTGAGCTACCTCAACAACAACATTTGGTTAGTTATTTTTATTTGTAAC CAATATGCACAGACAAGGCTATTCAAACCTCGTAAAAGATGGCTAAGTTG CACCGCCACCATGCTTTTTTTACAGAAAGATGAAGAATGGTACTGTATGA ATCTTTTTACCCACTTGTGATTTTGATTTCACCTTATTTTTCATTTTTCA GAGTCTCAGAAACTCACTGATGCAGCATTTACTGCAGTATTCCCTTGCCT CACATGCAACATTAACTCAGGTTTGTGTTTAAATCAAATGCCATTATTTT TCGAGTACAGCTGCAGGCTGCTGACCCATAGCCGCGTAGTGGTGTCAAAA TTTGAATCTCAAAAATATTAATCCCTATACTTAATTTTTTTGGTGGGTAA AATGGGTGAGGACTTGCCAATTTAGCAAACCGGAATTTTTCTGGTTTACA AAAAGATTCCCTAATTTCCTGATTTTCTAATTGTGAAAAATCGAATTGTT GCGATAAGCTTTATAGACTTGCAGCTCTGCCACATTTTCATCAGGTGATT GACAGCTAGGTGTCAAAAAAGCATTATTCCAGGGTGATGTGTGTCCGTAT TTTCTTGATAATTGGCTTCAAAATAGTGGCAGGGTTCCTCTTTTTCCTCA AAGAAAAAGTTAGTACCGGGGGTGGTGGTACCTAGACAAATTTCAAACCA GGTTTAAAAGGCTAATAAAGCTATTACCCTATGGGATGGTACCCTGTGAG ATTACCCCCTGCCAAAATTATTAATATCCTACTGTTGTCCAGGAATCAAA GATATCAATTTATAAATGACACCTTGAAAACGGCCTTGGCCGAAACATTT TGGAAATTTCTAGCATCTAATGGTATTTTTGTCTCGATCCTCCGTCCGAT ATAATTTATAATGACTTTACTTTCACTTTACTTTAGCAAAGTAGGGTATG ATTTATGACCCTGAAACTTTTTTTGTTTCCTCGCAATTCTAATAAACCTG TCTTGATAACCCTGTTCGCACGAAACAATTATATAGATCTTTAACATCCA TCTAACACTAGATTGCCGTTTACGCAACTTTTTGTGTCACCTGCGTATTA ACATGTTTGAAACAGACAGCCAATTATTACTATGTAACAGAGTGTATCTC ACGTTTATCGCTTCATAGTACACTCTATGCGCATTGCCTATTTGATAAAA AAATTCCCGTACGGAAACCTCTGCTGTCGGTTTGAAAAATCTCAAATCAG TAAAGACAATGACCCTCTACGGCAATGAATTTTGAAATTAGCCTTAGATA CTGGGTCTGTGTACAGACAGCCAATGTATGTGTACCAAGCAGAAGAGTGT TTTGTGTTAACAGTTTTATTTTCCTTTAAATCTTCCAGCTGTGTATAGCC CTTGCTGATCTATCCATTCAGTCACCGCAATGGGAAAATCCTGTCTCTGA CCTTATCAAAATGTAAGTGAGCTTTTTTTTGGTTCTCTATATGTTTTCGA TTTGTTTAATACTTGGGCTTTCTAGGAATATCAGTCAGAAAGAGTGCTAT AAAGGGTTATTCCATTAAATTTCCATACAGGGGGGGGATTTGAACAAACA TTTTCAAGGCAAAAAGAGATTCTTAGAAATGGTGGATACCCCCTGGAAAG TGATAAGATTTTCGAAAGAATCCTTGGAAAAATTAATTTCCTACCTTAAA AGTGAGGGTGGACGAACTATAATCTGTCTTTTACCCTGGAAATTTTAGAA TAACCTGGAAAAATGAAAAAATACTCATTTATACCCCCTGGAAACTCTTC TCCGATTAATACTTCCTGGAAATGTTAGTCCACCTGATTGTATGGATACA ATGGAATGGCCCAATTTTATAGGTATCTAGTATTATTTTACCTTATATCA AACCTTTGCTTATCTTACATTTTTTATTCCAGATTTTCTACAAAGCTTGA ACATTTCTCTGTGTTATTGGAAGTGTTAATGCTGATGCCAGAAGAGGTAA TGTAAATGTAGCTTTAAAAAGGTTATCCGAAAAAAATTACAATGAATCTT TTGAATAACAATGTAATCTCAGCCTCATTATATCTCTATCCTCCAGTCAG AAATTAAAACTGCTTATTTTTGGATGAGGAAGGCCTGGAACTGCTATAGT GTAGAATATGCAATTTTGATTTGACTATTTATGATTGGATGGATTTTACA ACGACATTTAACAATAATACGCTAGCAAAGTAGAATTGGTAAGTAGAGTA TTGGTAATTATATCTACAATCGGTGACGAAATACTTGGCACAAAAAGGAA ATCCACCTGGCACTGATTGTCTGAGAAACTGAAAAATGCCAAATTCTGAT CAGCGGGGGGTCTTATTGCTAAGTTTTTAATCAATCTTTCGGGCTCAAAA TCCCCTTTTCATCAATTTTAGGGGCTAAAACTTGAAAAAAAGTCAAAATT TTCTGAAATTTGCACGTTTTTGACTTTTCGTAAATTGGACCTTTTCAAAA AGTTAAATATTTCACAAAAAGTGATTTTGGTCAGAAGCAAACGCTTCAAA ATGGTAAATTAGCCAAAAGTGCCAATATGTTATGGCACTGATTGTAGAAG ATTTACACCACATTTTATGTTTCTATTTTTCTAAGGTCGAGAACGAATAT CTTCACATTGGGAAAAACAGAAGAGAAGAAGTCGTTGTGAAATATCAACG ATGTTCGCATGAAGTTCTTGATCTGATGGTACGCTCTCTCCCCAGCTCTT TGATGCTTTCTTCAAGTATTTTTAGTTGCTGTTCTAAAGATACACAGATT TTAAAGACTGTTATTCTTTCTCATGTTTTCCCAAATCAATAAATGGCCAT CAAAGACTCCCGAGAACACCCTCTAGTTGAACTATTTTTAAGAAGATTTC CCTTGATATGGCTAGTTTCCTCAGTTTCTAAATAAGTACAAAGATAGAAC TAGTGTATATACCTTTTTCACCTTTGCGAAGATGGTTCTTGCGGTTAGTT GTTGAGATATGTTGTTCATCTTTGGAAACTGTAAATTAAAGAATCACCAT GATAAATTCTTCAGACGCCCTGAACAAAATATTCCATTTTGAAACTACCA CCATGATAAAATATTGGCTCAATTTCGGTCAATCTGCTAATTTTTAAAAT GACTATGGAAATGCTTTTGCTAATCTAATTTTGAATCTAAACATAATTTT CAAAATTTCGGGATACTAAGAACATCATTCAGAAACTTTTCTTGAAGAAA AATCGTCTAGGGTACTACATTTTACAACTTTATAGCTTTTTTTTAAGTTT CAATCACTTTGTTCATTTCCAGCTAAAATGCCACGAGGTTTGCCCTTCAG ACGATAGAACACAGTGCAAGGTTCGTTTTTTTTATCACCTCTTTCAAACT CATATCAATATATTTCTTCAGAGAATGTTTTTAATTCTAATCTAGACAGA ATAACGCATGTGTAACAATTATTTATTGTTTTTTAGCTTTACCAATGTTT TGGAACTTGGTTGACACTTGGATCATTCCCTGCCCAAGTTGTTGTTGAAA GTAAATTGTTGAAACTGGCATTTGATACTCTGGTATGCGTAAACTTGATT TATCTTATTTTTTTACATAAACAATCAGAATTCATTCACTAATGTGTCAT TGGACTATGCCAGTTACATTAAATATTAAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036921TCONS_00036921Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036921-proteinTCONS_00036921-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001535supercontigsc0001535:3492..8374 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.64 15.25 75.53 72.15 50.23 38.13 31.88 31.98 22.6 25.36 23.64 20.63 18.55 18.39 22.01 28.74 28.04 27.73 11.67 14.64 19.52 19.33 19.15 22.11 22.82 22.99 18.53 9.33 21.46 20.09