XLOC_021750 (gene) - C. hemisphaerica

Overview
NameXLOC_021750
Unique NameXLOC_021750
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001520:33719..36855+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021750 ID=XLOC_021750|Name=XLOC_021750|organism=Clytia hemisphaerica|type=gene|length=3137bp|location=Sequence derived from alignment at sc0001520:33719..36855+ (Clytia hemisphaerica)
AAACAATGCAACTGCACgatgaaagctctttttaccAAATATGGtcaaaa
atgttggattctGCTTCATGTATAAACTCAGGCCGTACAGTTACGCCCTC
GCTGGTGTTCAAACGAACTCAGAGGTTGCAGCAAACGGACGTATCTATCT
ACTCTCTAACTTTAAACTTATAAACTTACAAAATGGCTGAAGATGATGTT
GCCGCTCTTGTCGTAGACAATGGATCTGGTATGTGCAAAGCTGGATTTGC
TGGAGATGATGCTCCAAGAGCTGTCTTCCCCTCCATTGTTGGACGTCCTC
GTCACCAAGGTGTCATGGTTGGTATGGGACAAAAAGACTCCTATGTCGGT
GATGAAGCTCAATCCAAAAGAGGTATCCTCACCTTGAAATACCCCATCGA
ACACGGAATCGTCACCAACTGGGATGATATGGAAAAggtaaatttatttt
caagcttttttcAATGTCAATCTTTGAAtctaaattttcattgaaagtgG
GTGTGTCCTGAGCTTCACATTTCCAGTTATTTATAGTctatttattttct
atttccttTGGGAATCAGTCCAAGGTAATTAGATATCTTACTGTTGTAGG
ACCTATGTGTGATAACGACTGTGAACAACAAAATCATTTCTTTCTATTTA
GATCTGGCATCACACTTTCTACAACGAACTCCGTGTTGCACCAGAAGAAC
ACCCCGTCCTTCTTACTGNAAGGTTGTTTTATTGGTCGAAACAATGCAAC
TGCACgatgaaagctctttttaccAAATATGGtcaaaaatgttggattct
GCTTCATGTATAAACTCAGGCCGTACAGTTACGCCCTCGCTGGTGTTCAA
ACGAACTCAGAGGTTGCAGCAAACGGACGTATCTATCTACTCTCTAACTT
TAAACTTATAAACTTACAAAATGGCTGAAGATGATGTTGCCGCTCTTGTC
GTAGACAATGGATCTGGTATGTGCAAAGCTGGATTTGCTGGAGATGATGC
TCCAAGAGCTGTCTTCCCCTCCATTGTTGGACGTCCTCGTCACCAAGGTG
TCATGGTTGGTATGGGACAAAAAGACTCCTATGTCGGTGATGAAGCTCAA
TCCAAAAGAGGTATCCTCACCTTGAAATACCCCATCGAACACGGAATCGT
CACCAACTGGGATGATATGGAAAAggtaaatttattttcaagcttttttc
AATGTCAATCTTTGAAtctaaattttcattgaaagtgGGTGTGTCCTGAG
CTTCACATTTCCAGTTATTTATAGTctatttattttctatttccttTGGG
AATCAGTCCAAGGTAATTAGATATCTTACTGTTGTAGGACCTATGTGTGA
TAACGACTGTGAACAACAAAATCATTTCTTTCTATTTAGATCTGGCATCA
CACTTTCTACAACGAACTCCGTGTTGCACCAGAAGAACACCCCGTCCTTC
TTACTGAAGCTCCTTTGAACCCCAAAGCCAACAGAGAAAAGATGACCCAA
GTAAGTACTAATTAAAAATGCTATTAGATTAGTCCTTCTCTTAACCCAGA
AAAGGACCTTTTCTGACAATTTACATAGTTTGTTGTTTAAATCGAAATTA
ATGGCAGAAGATCAGTTTCAGCTTGAAACATCCTTCCTATCTACTCACAT
CTATCCTTTGGACTTGAAAGTAGAACATATTTTAAAACTGACTTATCCCT
TTTCCAGATCATGTTCGAAACCTTCAACTCCCCAGCTATGTATGTCGCCA
TCCAAGCTGTCTTATCTTTGTACGCTTCTGGACGTACCACCGGTATTGTC
TTGGATTCTGGAGATGGTGTTTCCCACACTGTCCCAATCTACGAAGGTTA
TGCTCTTCCCCACGCCATCATCCGTCTTGATTTGGCTGGACGTGATTTGA
CCGACTACTTGATGAAAATCTTGACCGAACGTGGATACTCCTTCACCACC
ACTGCTGAACGTGAAATTGTCCGTGAcatcaaagaaaaattgtgCTATGT
TGCCTTGGACTTCGAACAAGAAATGCAAACTGCTGCCTCAAGCTCCAGCT
TGGAGAAATCCTATGAATTACCTGATGGACAAGTCATCACCATTGGAAAT
GAACGATTCCGATGCCCAGAAACCCTCTTCCAACCTGCCTTCATTGGTAT
GGAATCTGCTGGTATCCACGAAACCACCTACAACTCCATCATGAAATGCG
ATGTTGACATCCGTAAAGATTTGTATGCCAACACTGTCTTGTCTGGAGGT
ACGACTATGTTCCCAGGTATTGCTGACCGTATGCAAAAGGAAATCTCTGC
CCTCGCTCCACCAACCATGAAAATCAAGATCATCGCTCCACCAGAAAGAA
AATACTCCGTCTGGATTGGAGGATCCATCTTGGCCTCACTCTCCACCTTC
CAACAGATGTGGATCTCCAAACAAGAATATGATGAATCTGGTCCATCCAT
CGTCCACAGAAAATGCTTCTAAGTGCATTGCCATACTGGTAGCTCTTGGC
TTGCGTTTGCTAATTAACATCAAGGCAAAGGACAATCGTTATGTGAAGCA
GTGTTTACCACCAGAACTGTTCTGTTCACTTTGATTTGAACGattatttt
tgtaaaacatTTGTACAGATTTTGTGCACTTGACTTTCTTGGAAGTCTTG
GTTAACCCCAATCAAAATTTTGTAGTAAAATCTCaatcaaaaaatgtaaa
taataaCTTTAGGGAATATTGcaataaaagaaaattaaaatgctTCTTCC
CGAAACATTCAATATTCACTCGTTTAAATTTCCTTCCATGTCTGACTTTG
CTCAATAAACTTTCACTTTCGGTTTTGAATTTTAATCCTGGATTAATCCC
AACTTTGCTTTCTGGTGATTTTGATGGAACTCAGGCTTCCAGTCTACCAA
TAACTGTCAATTTGCAATTTATCTGATTACCATTTTAGgactttttagca
ttcaaaactTGCATGCCCAGCTGATTTCATTAACacaatttaaggctcaa
aagtcTGTACAGTTCAAGCAAATCCCTCAttagaaagataattttgagtg
gaTTTATGAATGCTTTTAAAAATGTGTAGGTGTTACAAAAATGACTATGT
GGCTATGATTTCTCGTCTCAtttaaagttgaaaatga
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036821TCONS_00036821Clytia hemisphaericatranscript
TCONS_00036822TCONS_00036822Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036822-proteinTCONS_00036822-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001520supercontigsc0001520:33719..36855 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ACTBactin, cytoplasmic 1 Homo Sapiens
ACTG1actin, cytoplasmic 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2819.4	2803.11	3036.53	3027.22	1730.01	1418.86	6785.87	7225.04	8403.77	10064.58	7549.89	6934.29	10335.13	11078.82	6626.54	8169.03	9503.13	10520.11	12426.43	10087.24	9576.82	10276.38	6072.44	6826.46	7435.79	6831.04	6414.09	7367.75	4538.27	4527.95