XLOC_021677 (gene) - C. hemisphaerica

Overview
NameXLOC_021677
Unique NameXLOC_021677
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001501:16358..23984-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021677 ID=XLOC_021677|Name=XLOC_021677|organism=Clytia hemisphaerica|type=gene|length=7627bp|location=Sequence derived from alignment at sc0001501:16358..23984- (Clytia hemisphaerica)
TGCATACAATTCAAGATGGCGGATGGAAGGAGGCGAAGTGCTTTTCATAA
AGCATGGCAATTTTTGCATTGATGTGATGTGATGTAATGCGATGTATAAC
CTCTGTTCAGCAAAGTTTTGCTAGACTTTTACAGAAATATGGTTTTCATA
AAGCATGGCAATTTTTGCATTGATGTGATGTGATGTGATGCGATGTATAA
CCTCTGTTCAGCAAAGTTTTGCTAGACTTTTTAACGGAAATATGGTTTTC
ATAAAGCATGGCAATTTTTGCATTGATGCTGATTGATGTGATGTATAACC
TCCGTTCAACGAAGTTTTGCTATACTTTTACAGACATTTGACTAGTAACA
ACATCAGGCTCAAGAAATGTAGTTTTCATAAAGCATGGAAATTTTTGCAT
TATTGTTATGTTTTTTCATTTAAAATTGTTCGTAGGAATAGGAAATAAAA
GGAAATTAAATGTTATGACTAAAACATAAATTATGACTTTTGAAACCTTT
CATTACAACACCTTTTTATTTGTTTTGAGAATCAGAAAATTCCTTGGCAA
AGACAAGCGTGTTCTGGCGTGTTTGAAATTTTAAGCTCTTAGTATACAAC
CTTAAATTGTTGGAACCTTAGTTTAATTTTCTTTTCGTTTTGGATATGTT
CCAATCACAAGTCTGATAAGTTTAGTATACAATAAAACAGCATATAACAG
CATATAACAGCAGATGTGACTGGTTAAGGTGTTTCACAAGGTTAAGTTCT
TAGCTGTTCTTAGCCCCAAGTGTTGAAAATGTAGATTAAAACGTTTTCAT
AATATTAAGGTTCCTTATGGTATCATGATATTTTGAAATACTGTATGAAA
TATTTCACCTCGAGCCAAGTTTTTAGTGAAAATTTGTTCAGATTTAGGGA
GCAGTAGAATGTAGGAAACCATGGAAAGTCTATTTTTTACTTGACCTTAC
CAATAAACCTTTTTAAACAGATAAAAATGACAACTGGAAAAATATTTCAG
GCTGACATCATATATGCTTATGTTATGTTTACGAATTCTGCAAATCTGAG
CCTTCGTATGCTTATAAGCGTTATGCTTATTAAAAACATGTTGGGGAAAA
ACTAATAAGTATTGCCTTGAAAAAAATATTTCTTATCTAAATTTGTTTTA
GAGTTTTAAAGTGAAGATGTCTAAAAGACCATACAAATTCAAGGCAGTTA
CAGTTAAAAGCACCAAGATTAGAAGTGGCAGAAAGACCACTTCAAATCTT
CAACCATCTCGATCAAAACGCTCGCAATCTTTCATTCCTCGTGAAATTGA
TGATGATATGTCAGAACAGGATCACTTTTCTCCTGACTTTCAACAACCGT
ACAACGAACCTTTGTCATCTAAATCAAAGTATGAAAAAATGAAAGAAAAG
GAGCTTGGGGCATGGGATATTTTTTCGTCAGATTTTATTCTAAATTATTC
TGAAAAATTTGACATGTTGCCGGCAATCTGCTCTTTTTGTGAGGTAGAAT
TGACTGATAGCTGCGTTTGGTGCAAGACTTGTGGACCAAGGACAACTTAT
TGTGGTGATTGTGCAGTTAAAGTCCACAAACATATACCTTTTCATTGTTT
ATTTAAAGTAAATGTGAGTAACAAACCTTATTTTGGTGTGAGTTTAATGT
ATCACTCTCGTGTCCTTCTATTGAAGTGTCCTCCAGAAATTTATTTTCAA
AGCATGTAAAATTAGAATGATGTAACGTAAGATGGCAATACTTAAAACGA
CTTTATATTCACATTCTTGTGTTTGTTCTAGCCTGTTTTCTGCATTTGAT
AAAAAAAATGTATCACTAAAGTTTTTTCAACTTTTAATTCAATTTAATGT
GAATTTAATGTTTCCTTAGTAGATCTAAGTTTCTTGCTTGCATTGAATGG
AAAGAAGTTTTCTGTTTACAGTATTTGAAAATGAACCACTTGCCAATTTC
TTTTTTATTTAAAGGGTGATGGTCTAGAAGACTTCCATGTAAAGTACGAG
CTGAAAAGCAGGCATACAAGCCAATGCAGTCTTGCCAAGCCTAGGCTACT
AACAGTCATTTCAGAGACAGGTATTGAATCCTTTACCAATCGTTCTTAGT
ATCTAACTTAAAACTGTTACTATGCCTGACACTTCTAATTCTAATTCTCT
AATTACTTTATCATTTATATTTGGGAAGCCTTGCAGCATCTGACCCTTTA
TTTTAGGTGAACAATTTTCACAAAGTTATTTGTTAAACTTAAAATTTACA
TATTCAAATGATACAAAGAACTATTCTGCATAATTAAACCTGTAAATGGC
TGCATATACTACACAATATATTTTCGGGCAATATATTGAAATGGTGTACG
TAATATATTCTCAGTTCGGTCTTTAATATTCCAACAATGTAGGGGGATTG
TTTATTGAAAGAAAATTTCTCTTTTTATAATAGAGCACCTGTTGTTTTCT
CCATACAGCACGGACCATATTATCGAAGATTGATCATTAATATGTTGTGT
AGTCTAAATAGCTTATAAACAAACTGTAGATATTTGTTGGCTTAAAGATC
TTCATGTATTTTCTTTCAGAGAAAATTCCTCACCCGTTTGGAAAAGACTG
ACTCAGTAGACCAATTCAGAAACTTTCGGAGGCAATTGATGAATTTAAAA
ACCATTTGTAAAGAGTTCACCGGATTAGAAAAGTGTGCCGCTTGTCCTAA
AGTAAGTCGTAAAAAAAACCTTAAGCCTTGGGGCTTTAAACCCTAAACCT
TAAGGCTTCAAGCCTTGTTGATGTCAACTAATCATCAGTCGGACAATTTT
CCATGATTCAACCAGTTTACGGTTTATATTGGATGCAAAAGATCACATAT
TTCTTATGCGTGTTAATCATTAAAACAAATCTCTTTTCCATTAGGAAAAT
GGTAGCCTTTACTATTGCCTTGATGCTAACTTTGGGCTTGTGCTTAAAGG
ATCTGCTTCGAAATCAAAGAAACATACGATACGATCCTCTGATTTATTTG
TTCCTGATGCAGAAATAGATTCATATATGCTGAAATATGATGACGCTTTA
AAAACCAAGGTAGCTTTTTCTTACTTTCCTAATGTGTTAAACGTATTTCA
ATAACAATAACAATACACACTTTTTTTATAAGAATAGTGAACTTTAGATG
AGAGTCAAGTATTCATAATAAATTGCCAAAATTGAGGGTGAAATATTCTT
AACGTATATTCTTACTTTTTTATAATAAGTCAATAGCAAGACATAGTCGA
ACTTTCTATTCTTACTTTTTTAGACTTGACTTTTTACAAACATGAGAAAT
GATCAATTTGAGAGTTTTGGACTTTAGAATGAACACTTGGAGCTAAAATT
ACATTTCTGTCTCAAAGTTTAAATTCAAGTCTAACAAAGGAAGCAGCTTT
CAGTGCTGCAAATAACGGCCGGTGACCGGTAATTACCGGTCATTTTGTAG
TTTCTACCGGTCATTCTGAGGCTCAGTTTTTCATTTTGTCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGTGTTTAACCAATCTAAGTCATCACATACTA
CAAAATTTTCTAAGATGGTTCCACCAGACCCCCTGCTCGTTACACTCGAA
AAATTACCGGACAACTGAAATTTCCTTATTTGCAGCACTGGCTTTTTTCT
GTTAACCAGATACAAAATCACTGTATTCTTATCAAATTCTGTGAAATTCA
CCCTAGAGGGTTTTCTTAGGGTATTCTGAAGATTTGGTAAATTTTCACCC
TGATATTCTTATAGAAGATATTCTTATAAAAAAAGCGTGCAGTAATAAAA
TCAAAAACTAAAGCTGTATTTATTTTCACGTTTCCAGGACTGCAGTAATT
TTCAAGCTGGAAATAATTTGAGGTCAAAGAGGAAAACCAAAAAATTAAGT
GTAACTGGTATTTTTGGAATGTCTTGTAGACATGAATTTCCGAAACTCTT
CCTGAACATGCGCCATGGTGAAAGGTATTGATGCAGTGAATAGTTCCATT
AATTGAACAGTTGAATCGCAGTGATGTTATTGGTAGAGATTTTATTTTTC
TTATTTATGTGCCTCTTCTGAATTCAACAGTTCTACTTGGAAAGTATACT
ATTGTTTTATAGGTTGGGCTATGCAGTGTACTTGCTGGACCATTTGTTAG
AAGAAAATAACAACAAAAATCTTCTCGTACACATCATTTATGACATTGCA
TGTGTATTAAAATTACACTTGAAGGTCTTTACATTTTTAAGTTCTATGTG
ACTACAGAAATGACCTTCCTTCGTAGATCACGATGGAAGTATTATCATTA
TTATTATATATAATAGTGGAGGCTGTAAATTGAGGAAATTACCTAAATTT
GGAATTAGTACATTCAAATTAGCATATAATGATATAATATCTCCTTCTGT
TAAATCGATGCACTTTTCCATCTCACTATACACCATAATTTAGGAAAACT
AGTACTTCATATCCAGATACGATTTCCTTGCAGAAGAAGAACACGTTAAT
GAAGTATCGAGATTTCAAGTTTGGAATTCCAGTATTTCACTCTTATGGTC
ACCGAGGAGATTGTCAGGTAATAAATTGGTCATAATCATTAGGCTTAAAC
ACCACCCGCTTTTATTCACAAAATAGCATAAGAATAATTAAAACGTCGGC
AGGGAAAGCAGCTTATGCTATATAATTTGATGATTAAAAAAAGTGAATCG
TTTTCTTAAGCAAATTGAAGGTATTTTCTTTTTGGTTTTAGGTAAAAAAT
TCAATCCGACGGCTAGAGACGTTTGGCTTGATGGATGGTGAGCTAATGGA
ACGGCTATGGTCTTATCTGAGGTCTTTTTCAAAGATAACAAAGGAGATGA
CTCCTGCCCATCGCACCGATCTCCTAAGTGATGCATTATTGCATTTTGGC
TCAAAGAAAATGAGTGGCATTGGTAAGCAATTAGCTTGTTTCAAGTACCA
ATTGGTAACTGCATCACCCGGTACAACTTATTCAAATTTTATAGTTCTGT
AATAACAAACGGGAAACGTAAACGAAAACATTGTACACTTCTCAGGCACA
AAGCCTTAAATATTGTCATGATTTCAAATTTACAATTTCAAATCACATTT
TTTGCAGGAAAATATCTGGTGTTTTTGCATCAAAAGGCGATCAAAACATT
ACAATCATGTGAAACGGAAATACAGTCTCTATGCTCGAATTTAGATGGTA
CTTTTTTACGTTTCAAGTTCTTCGCAAACATGCTGAGTTTTGTGTTTTTT
AGCCACCTATTATCAATAAAATTCATCAGTGCAATTTAATGAAGCAATAG
TATAGTGGATATCGACTATGAAATAACAAAGATTTTACTTCTTTTCTAGT
TGAAGTTACTGATGATATGCTAGATTCATGGAAAACCGAAGAAGACAATG
CTGTGAATATGAGGGGTGTATCTTCTACACAAACGTCGACAACAGGTCTG
TTTACTCTCTCTTCTTCCATTGAATGAATATAGTGGGATCTGTTAACACT
CAAAAATAAAAGAATACTTCAGATGATGATAATAGACCAGACCCAGAATA
ACACTTAATATCCAAGGACAGGGAAAACAAATGTATTCCATTGTGCACGG
TTTTCATTATTTCTTTTTGGTAAGCAAATTGAAAAATAAAACATTGGAAA
TTTCGTTTCTAGACATAGCTGATTGGAGGCGAACTTATTATGAAAAACTG
AAATCTTTCTACAAAGAATCATCATTGGTCTTGATCAGTGAAAAGGTGTC
AGATGTCGCTTTGCACCAGCGTAAAGCCAAGCGGTAAGTCTTACTTTACA
CACTTCAATACACGTGCTTCAAAGAAGCACTGTATTTGGTTATGTGCTGT
TCAAGATAGCCAAAATGCACTTTAAGGATGGAAGTTTAAGTAAACCCAAA
AAACAAGAATTTTTGCTGCGCTGTGAGGGGGCGAGACTTTAAAATCTCTT
AACTTGTTCCTCCTATGTTATATACAACTTACAACCCTTACAGACATTTT
ATTCTAGGATGGCATCAGCTTTGAATTCTTTTGAAATGAGGAACAAAGTT
TCCAAACGATGGACGGTGGCTTCTGAAGAGTATCGAAAACAACACGAAAA
GTATCTGAAGGAGAAGTCAAAGGAAACATTATCAACTCTATACAGTAGAT
GTTCGGAGAGATTAATGCTTTTGGTTCTCAAGAAACGTTATGCAGGTATT
CTTCAGAACAGTATAAACATTTATCCAATTTAAAATCTTACTTGATAAAA
CAATACCTTAGCAGAGCTTGTCGTTTAGAAATATCCCTTAAAACCTCTTT
TTAAAGGGAATGGAACACCCAAAAACGCGAACATCATTCGTAAAAATTCA
CCTAAGGTATTAATAACTAGCAAAAAGTAAGAAAAACTATGGACTTTTGC
GTTTATTCTCAATTTGTTCTCCACTTTATTTCTAGATGGATCAGCTATTG
CAACGAGGCTTTCCAAACAAATAAACAAAGTGTGCTCGGAAATCAAAAAC
CTTTTGTCCTCGTATAATAGTGTTAATTTGGAAATTTCATCAAGATTCAT
AGTAGTTACCTACACAGAAGTTTTAAATGTGAAGTCCACCATTTACAATG
GCATTACTTACCTCGCGCTAATGTAAGTATAAACATGCTACACAAAACAT
AATTCTTTTTCTTGACCTTGTTATATTAAAACTTAGTTTTCTATATTCTT
TCAGAAGAAATAATGCAGGCTTTGGGGAGTCGTTTTCACATTTATTCCAT
GATAATTTTTGATTACAAGTGTTTTGTTGTTTCAAGTACCTTAATAATCT
GTGACCAAAAATTTTACGTTCATTTTAGGTACAATGTTCTGCTGTCCCCA
GCACAGTTATCAAAACGTTGATACAGTATAATTTGCGAAAGCACAGAGCA
AGAGAAGAGATACTGATCGTTGAAGCGGAGATGCAAGAGACAATTTCATA
TTGGGAAGAGCAAGTGAAGGTGCTACGTCGATGTTTCGAATTACAAACTT
CGTTTGGAACCAGGCACATTATAAGTGAAAAACTGAAGTCGGCTATGGGG
TTTCTTCTCGATCTGAAGAGTTGTTTTTCTTCTTCTTCAAATACGCTGCC
GACTTCCGAATTAAACGTTGACGTTATTGATCTCTTTGATGATGAATCAT
CTGCATCTAACCTATCGGATAGTGATAGTGATTCCAATGATTCACATAAT
AACGATGAAGATTTTTACATTTGAAGCAGCCTTTCTGTTATATCATATTT
GGATATTGCAGCTTTTTATAAGCTTTTTGTTTTTAATATTTTTGTTTAAC
CAATATTTTTAAAAGGATTTCGATCATTGAGGGTCTGATTTCTCGGTGAA
TTTTCATTTTCAGATTAGATTGTAACATTTTAATGAATTACCCAAGTCGC
ACAATAATGTTTTAGATTCGACAACCTCAATTATTTAGCCCGTATCAATT
CCCCATTCGGTTTTCAACACTTTTATGTACAAAGGACAGCGGAATACCCC
CTTTTTTACTTTAGGGGATTTTATTTAGAATGGTTTTAATGCTTTTATTA
AATCTTTCTTAGTATTTTAAAATCAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036710TCONS_00036710Clytia hemisphaericatranscript
TCONS_00036709TCONS_00036709Clytia hemisphaericatranscript
TCONS_00036708TCONS_00036708Clytia hemisphaericatranscript
TCONS_00036707TCONS_00036707Clytia hemisphaericatranscript
TCONS_00036706TCONS_00036706Clytia hemisphaericatranscript
TCONS_00036705TCONS_00036705Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036706-proteinTCONS_00036706-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001501supercontigsc0001501:16358..23984 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.43	2.15	1.69	1.43	16.81	13.45	14.69	15.65	11.15	8.53	9.07	9.14	6.41	6.72	1.81	2.25	3.07	3.4	1.01	0.99	3.5	3.81	2.25	1.99	3.65	7.73	4.12	2.08	1.85	1.28