XLOC_021642 (gene) - C. hemisphaerica

Overview
NameXLOC_021642
Unique NameXLOC_021642
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001492:103..2219+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021642 ID=XLOC_021642|Name=XLOC_021642|organism=Clytia hemisphaerica|type=gene|length=2117bp|location=Sequence derived from alignment at sc0001492:103..2219+ (Clytia hemisphaerica)
GctaaaactaacaaaaacaaTTCACAAGAATTCTGTCTCTATACTGGAGC
AGATACATCCAAACCAGATAATGCACTTCTTCGCTCAGAAGCTGCATTTT
GTGCCGTGCTTGACTGTGCTTGTTCGANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTCTCTATACTGGAGCAGATACATCCAAACCAGATAATGCACTTC
TTCGCTCAGAAGCTGCATTTTGTGCCGTGCTTGACTGTGCTTGTTCGAGC
ACAGTTTGTGGAACATCCTGGTTTCAGAACTATACTCAAATGCTCAATGA
AgaggagaagaagaaaatcaagcaGTTCACTGGAGGCAGACTGTTCAAGT
TTGGCGGTGGTGAAGTTCTTTCCTCAATTGCCTGTTATGAAATCCCTGCG
TATCTTGCGTATCTTGCGTATCTGAGCAGATCTTCAACAATGGCGATCGA
GTGTTCTACATGCGTGAAGGTTCAAAGAAATGGCTTGGCCCAGCCAaagt
ggtgtttcaagatggcaaAGTGATATTTATTCGTCACGGAGGAATAATGG
TTCGTGTTTCTCCAAATCGTCTCATAAAAGCACCAGAGGATCCAACACTC
ACACCAATGGAAAACAATGCCAAATCGCGTGGAGAAGAATTTGAGCTGCC
AATACAGACACCAATATCAATCATAAACCCTTGGTTGAAGTTTTGTCAAA
ACATGATGGATCCAGATCAAAAACATTCACTGAGGGAGATGTTAGTATCA
ATAAAAGAACCGCCAGAGGTGATAACGATCCACCAAATCCAGACGAATCA
ATAAGACCAGCAACACCAACAACAAGACAAGGACCGTTATTATCTGCGTC
TCCAACAGTTAATGATGCAATCTCAGTTCAATCAGCATTCCAGAAAAAAG
CCACATCATCTCAACAATCGCCTATCATCTCTTCCAAAGCTTCACCTAAA
GATTCTACATCCAAACGTTCATCGAGAAATTCATCAATAACAGCTCCATC
ACCAAAAGATTCAACACGTCAAACTGTGAAATTTCAAGACTCATCCTTAG
AAACATCCACATCAAGAACAAAACAGACAGCAAAGAACCAGACGTTTCCA
AAGAAGGGTGAACCATCTCAATCAAGCAATCATCAGAGTGGCAGTCTGCA
AAGGTAATAAGTCGTGCTGGTAAAGCCAATGGGAAGTTCAAAAGCTGGTT
CAACCTGGAAAGCTCAGAAGACCAATCTCCGATGGCTATTGATTTAGAAA
AATGTGAGTGGAAGCAAATTCATGATGCTCCTGAAGAAGTCAATATTGTT
ATCATACCAAAGAATCAACAACAAACACCTGACTGTGAACGAGCAAAGCT
GGAGGAGATTGAGAAGCTCAAACAATTCAATACCTTTTcagtaccttatt
ggaactaattttcgcgggttttaattttggCGTTTTTCgtggtttttcgt
caaaatcgcgaaaatttgatcccgcgaaaaattttgagagttgaaaaccg
cgaaaattaattcccgcgaaatacaattttttccaattttatcgaaaaat
ttgaaaaatccctaggaaaatgaaggaaatttgtccaaaaaagggcaaaa
ccgcgaaaattaaaacccgcgaaatgcaatttttcggatattttttttcg
accgcgaaaattagttcccgcgaaaattagttccaataaggtagttaAAG
ACGAAGGTCAATTTCGTATATCAACAACATGGGTGTTATGGGAGAAGAAT
GGTGGTGTCTGAGCACGTCTTGTTGCAAGAGGCTGTGAGGAATCATTCAA
AGAAAGGACAGACTCACCCACAGTTTCAAAGAATGTCCTGCGAACATTTC
TGGCAATTGTGCCAAACACGAATTGGGATGTCAAGACAACTGATATCAAA
TCTGCATTTTTGCAAGGAAAAACAATCTCAAGGGAAATACATGTGTCTTC
TCCAAAAGAAACTAAGTTGAAAGGAAAACTTTGGAAACTACAGAAGTGTC
TCTATGGGTTAAACGACGCAGCCCGACAATTCTACGCAAGTGTTGCAGAT
GAGTTAACAAAGCAAGGATGTATACAATCAATTTTGGATCCAGCAGTCTT
CTACTACAAGTTAAANN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036660TCONS_00036660Clytia hemisphaericatranscript
TCONS_00036661TCONS_00036661Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036661-proteinTCONS_00036661-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001492supercontigsc0001492:103..2219 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.66	4.36	4.41	3.87	6.77	4.12	4.26	5.24	3.21	2.95	2.7	3.53	2.12	2.01	1.75	2.09	1.89	1.87	2.52	2.89	3.85	4.48	2.09	2.81	2.54	2.5	4.09	3.87	2.48	2.36