XLOC_021634 (gene) - C. hemisphaerica

Overview
NameXLOC_021634
Unique NameXLOC_021634
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001491:13725..19228+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021634 ID=XLOC_021634|Name=XLOC_021634|organism=Clytia hemisphaerica|type=gene|length=5504bp|location=Sequence derived from alignment at sc0001491:13725..19228+ (Clytia hemisphaerica)
ATAACGAATCACGTGGATACCGTATGTCCAATGGTCTCCTATTGTGAATA
CAAAGACTCAGGATGCTACTTTAAGGTAAATTTTTCTTATGTTAAAGCGT
GTGTTAAAGCtgcttttttcaatttccaaaggaatgaaatgaaaatttcc
gaATAATTCGAGAGACGAACTAAGCTGGACGGCTAAAAAGGACTCTGCAA
GGAGTCTTTCGTGGATAAAGTGTTAGCtttattttgtcttatttttcaAA
GTAGCTGTACCGCAGCACTATCcggatttttgtcattttggcccGTTTGA
GTGTTAAGGGAACGTTTGGATTGTTTAAAGTAAGTACGGTAAAGTATAGA
GgttaaaaaactgttatattatTTAAAAAGCTAAGATTCTTTAAATTGAT
TGGTTTCAGGGCACCAAATTACAACTGGACAATCATATGGCACAATCGGC
CAACATGCATTTGTCTCTTGAAATGAAACGtgagattttcaaaatgaaaa
aagaattcgATCAAAAGTTGACAGCGAAAGATCTCGAAATtcaacaaatg
aaaaatgaattcgTTGAACAGTTGAAAGAAAGGGATAACGAAATCGGGAA
ATCCGAACTTGGTCAggtcttgaaaacaaaagaccAAATTATTAAAGCTA
ATGACAATGGTTCTGTGTGGGTAATCCGTCAGCATTTGAGCACGGCTTAT
TCAAGGACATAACTATGAATGATAGTGTTGCAATAAGATTTGTAATGAAT
TAATTTTCTAGTCATTAATTGGTGCAAATGTCATTATATATTACGTTTTC
GTCTTCTTTTTAGAGTAAATGTATGAAGAGTTTATAAAGATTAGAAATAC
GGGGGCGttggaaaatttccaaatttagTTTGAAAACCTCgaacaaagac
caaaacaacgtctaGTCTGTCCAAatcttctgacgactggacggCAGATG
AAGATTAGACAATAtttaataaattctaaaattatttcgtagataattaa
ttaataattctatgaataaataAAGTAAAATGAATGAATATGGAATGCAA
TCATTAATGCttatatgaaaatttgaataatttcttgaaactgttcataa
gaacaatgaattaacaattcgcaaaaaataaataaccttcctgatttttc
gattttatgcTCAAATTGCTGATCTAAATGATAGCGTATTATGGGGTGAT
TCTCGAGAAAAACGTGTGTTTTTAGGGCGAAAGGTTCTATAGTGTTATTA
TAAAGGAACTATCACTCTTACCTAAGTAGTTTCATTTTTCTAAGGAATGC
TGTctttaaatctttaaatttcaaggcCATTGATTTGTCTATATTCTGTT
TTTTGATAGATCTTTTTGTTCAAGAGgtattttgaaagtgatagtaTCGA
GATATGAGCTTACTGTAGCATGCTATAGTTTTGGAGAGGGACGAGAAacg
gaaaattattttaatctaATCCTGTAACTATTTGTGAAAAGTTCGATCTT
GGTTgctgaaagttagatttttaaACAATATGGCAGCTTGTAAACCAGAA
GAGTATGGTTTTGATGTGACGTTCATATGGGAAgacgaaaaatctgaaat
aCCTCAAACAACAGAAGAAAATTCTGTACAGAACGCCAAAGAAATCAACA
GAGACGATATCACTTGTGCAATATGCCTTTTGGTTTTGCGAGAACCAGTA
CAAGCCGTGAAATGCGGGCATCGATTTTGCGAAAAATGTATTGGGGAATT
TCATCTTCAGAAGTAAGTGCGAACAGTAGCCAGTTCACGTCgaaattttc
tatatttttgttAGTCGTCATTTTCTTGTGTTCTATAAAAAGTTTTCGTT
AAGCAAAGAATCTACAGCTCAAATTAATTGCATTGGAGAATTATTTATGT
TAATCATTTTATTCTAGTCCGGGAAAATGCCCCAAAGATTGGCAAGAGAT
TCAAGTGTTTCCTGATgtgggaaaaaaaagagaaatactCAGTTTGAAGA
TTCGATGTCCGAATTTTGTTGATGGATGTACGTGGCAAAATGAGCTCAGA
GAGAAAGAGGTTTGTAGGCATTATTTCATTTAATATCATCTGTACGCAGA
AAGAAGACGTTTTCGAAAGTGGGGATGGCTGTTCTAGAAAAACGCTAAAA
AACTACAGCAAATTTCTGATTTTGGGATCTGGCACTATGTTAAAATCATA
AGACCCTCCACTTTACTAAATTGGATGCTTTAAGTTATGCTCTCATTAGG
ACCAATTTATGAAGTGAAACCATATCGCCTTGAAGGGAGGGGGGAATCTA
CTTGATGATATTTATAATGATTTtgatttatacaaaaatttaaaaagggg
AAGAGCCTAGAGGTAGAGGAGGCTGATCTATATTTGAGGTAGCAACCCCC
TTCCATACATAAGCTTTAGgccaattttcttatttagggAGTCAATTTCT
TTTGCAATAGATAATAACAAGCATTTATCATCGTTTTAGGTTCACCtgaa
aacttgtggatttgTGACTGTTCCTTGTGAATTAGATTGTGGAGAATTCG
TGCTCCGTAAAAACGTAAGAACGATTTGTTATCATTTGTAAGATATCAGA
GAGGCCTGGAAAAATACGAGTTAAAGGACCTTAAAAAACCTCGGGTCATA
ACTCTGGTTTTCTTAACCCGGGTTTTGCAGACCTCGATATGTGAATACAA
ACCATGAAAACACTCGGGATAACTTTTTGTGAGGCCCTGAAAACCGGAGT
TCGGCAAACCCTAGTTACCTATTTTCATAACTTGAGAGAAATGGCGTCAT
TTTAGAAGATAACTTGATTTATGATAATAGCTCGATTTGTTTGTGGTTAC
CTTAATCGTTCGAGTTAGTTAACTCGGTTGTTATGAAAATATGAgttatg
aaaatttgttttctgGAATCTTTTAACCCAGTCTTTTTGGTGTATGTTTT
TGAGTTTGTTAACTCGGATTTTCAAGAGGCCCGAAAGAGCTGATGTTGAA
AAACTCGAAATATTTTACTAAGAGGGAGTTTTAGTAGTCTATGAATCTGT
AAAGGTGCCCTCTTATGCAAATGAAACATTTGCTTCAAAAACGACAGTGG
AAATCTCATCTTAtgattctcaacttcagttgagttacaatctgacaatg
tctgagtgtgtgtgtctgtctgtctgtcacaaaaactttagggcagcctg
gagacttcaaaaatgcttggatttggctgaaatttggcacacttgttcct
tgggtgaatatctgggttttttttcttcattttttgaaaattttgatttt
tggggcctggggacgagtttttcgccaaaacgaggctaaaactttggggc
aacctggagacttcaaaaattgttcattttggctgaaattttgcacactt
gttccttggctgaatatctggggttctacaattgggcatatgaatagttt
gaaggcactgaagttgagccctgTGCGTTgtgcacgttcgactattcTAC
AATTATAGACATATTATTTTAGCTTATGGATTCTTCTTTAGATAACAAAT
CACGTGGATACCGTATGTCCAATGGTCTCCTCTTGTGAATACAAAGACTC
AGGATGCTACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCAAAAATTGTTcattttgactgaaattttgcacacttgttcc
ttggctgaatatctggggttctacaattgggcctatgaaggcactgaagt
tgagcccagtgcgcgTGTTCGACTATTCTACAATTGTAGACATATTATTT
TAGCTTATGGGTTCTTCTTTAGATAACAAATCACGTGGATACCGTATGTC
CAATGGTCTCCTCTTGTGAATACAAAGACTTAGGATGCTACTTTAAGGTA
CATTTTTCTTATGTTGAAGCtgcttttttcaatttccaaaggaatgaaat
aaaaatttccgaATAAATCGAGAGACGAACTAAGCTGGCTAACTACAAAA
GACTCTGCAAGGAGTCTTTCGTGGATAAAGTGCTACAGTATCtttatttt
gtcttatttttcaAAGTAGCTGTACTCTCCGGATTTTTTGTCATCTAAGT
AAGTACAGTAAAGTATATAGGTAATAAGCCAGATATATTATTTGAAAAGC
TAACGCAGTTTCTAAATTGTTGCGTTTCAGGGCACCAAATTACAACTGGA
CAATCATATGGCACAATCGGCCAACATGCATTTGTCTCTTGAAATGAAAA
gtgagattttcaaaataaaaaaagaattcgaTCAAAGGTTGACAGCGAAA
GATTTTGAAGctcaacaaatgaaaaatgaatttgctGAACAGTTGAAAAT
GAGGGATAATGAAATCGGAAAAGTCCGGTTGGATCTTGATCGAGACTTGA
AAGCAAAAGACAAATTGATTCATGCATTAGCGGAGCGATTAAAAATTGCA
GAAGAGAAATTGAAAGGGGTCGACGAAATGGAAATCAAAGTTCAGATGAA
CCAAACTGCCATCAAGTCCTTGGAGAAAAAATTGCTGACGAAGTTGAAAA
CAACCGATAAAtctctttttgatttgaaagaagAATTTATGCTGACTAAG
CAGGAAGTTGAAAAAGACAAAGAACGGAATCAAAAAGACGATCTTTTTAA
AGGATCGGGTAGAGGTTTAGCTGTAAAAGAGGAATTAAATTTGGCTATCT
GCGCACCATCACTATGTAACTATACATGGACCATCGAAAATTTCAAAGAG
AAATTTGACGCTGCTACGAAATGGAATGAGTATAATTCACCATATTTTTT
ACTAAGCATGGTTATAAAGGATGTATTTTCTCCAGGTTTCGCATGACCAA
TCAAGACAACAAAAACACTTATGTATCAATTTTCTTTAATAATGAGGAGG
GTCCTCATGACGATACTTTAGAATGGCCAATGCCTTGGAAATCATTGATT
TTCACTTTGATATTTAATGGAGTTGAAATTGCTCAAACTGTGAGAAGAAG
TAAAGATGAAGGAGGTAGATGGAAAGATTCATTTGAAAGACCAGTTGGTT
ACTGTGCTTACCGGCTTGGAAATCCGTCAGCATTTGAGCACGGCTTATTC
AAGAACATAACTATGAATGATAGTGTTGCAATAAGATTTGGAATGAATTA
ATCTTCTAGTCCTTAATTGGTGTAAATGTCGTTATATATTACGTTTTCGT
CTTCTTTTTAGAGTAAATGTATGAAGAGTTTATAAAGATTAGAAATACGG
GGgcgttggaaaattttcaaatttagttCGAAAACCTCgaacaaagacca
aaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036647TCONS_00036647Clytia hemisphaericatranscript
TCONS_00036648TCONS_00036648Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036648-proteinTCONS_00036648-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001491supercontigsc0001491:13725..19228 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09	0.46	0.16	0.06	3.49	2.34	2.45	1.55	2.61	2.54	2.58	2.65	2.73	2.46	0.4	0.14	0.4	0.48	1.93	1.09	2.19	2.23	1.08	1.22	1.14	1.59	0.6	0.54	0.47	0.07