XLOC_021561 (gene) - C. hemisphaerica

Overview
NameXLOC_021561
Unique NameXLOC_021561
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001479:30650..34286+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021561 ID=XLOC_021561|Name=XLOC_021561|organism=Clytia hemisphaerica|type=gene|length=3637bp|location=Sequence derived from alignment at sc0001479:30650..34286+ (Clytia hemisphaerica)
AATAGATCCATTTACaacttataaaaaatacaatcAATATTAAACTAAAT
GAGTAACAACATATTATCAGATTTGAAACTTCCCGAGCCAGACGTTCGAT
TGGTGGTTTACAATCAAACCATAGTCAAAGTCAAGTTGAGATGCCGTAAT
GCTCAAATCACTGGTGAAACGAGCCAGGAAAGGtacttatatattttttg
atgatttgggtttgacttaatttcgcgaattattCATTATTGGTGAGCTT
TTATGTGAAACTGTGTTGATCGTTTTGGATATTTGCATTATTAACTCTTT
TTCTCTTGACAGTTCATCATAATGACCTTTTGGCAAAATTGCTTTGGAAT
AAAAAACACCCACTTGAGACTGGGAAGTTTTATCGTGGTTGAAGTTTTAT
GAAATTGcattttggaactaatttttgtacATATAACAACATGGACTACC
CTCCAGCCCtttgttttaaagatttttctttccattttaCAGCATGAAAT
TCTGGAAGAAAAACAAGATTCAAAACGACATAAAGGTATCGAATACTAGa
gtccattcgctttaagtgtgcactgaACCTTTGTTTGGCTTGTCAAATGT
TTCAACTTTAACATATGATATATCGTTGAAAAGATGATTCAGAGCACtat
aatttctgaaaaaataaattcaaaaattttagtaaatgaagatgaaatat
gaagatgaaaaaagcgAACTTTTTATTCTATATTCAAAgttgcgtattag
caatgcaaAACATGATCGAGTTCGACCTTTAAATAAATCTCTGCCTAAAA
CGGCTGGAAATAgtctttttttcagattttcattgcattttatcgttaga
tttctttattttttcacacAGAAACGTTATTGATAACAATACACACGATC
AAGCATGAtctaattgtcaataaaactgattttttcatCCGAAACTTTCC
AAAACTTGCCAGAATAGCCGATTTTTCTTGGAATCTCTTGAGCTGTAGTT
gacattttttcatgaaatttcgcacactgatgcaaaatggacATACCCTG
TGACAGAccctgatttttgaagaaaaaaaataatttgccGGAAAATATGT
CGCGAAACCGATCCTTTGGCagtttctcgagatttcatcattatttttta
cacaaagatgtgtattagcaatgcccaaaatatgaCCGAAACCgatttca
atttctttgttttttttcacacgACCACGaccttccctctcccccataAA
CAATCAATGAGGTTAATGCGTTGTGCATTTCCActaacgctatattttct
gactgattgttgtcattttttccGTAAttctatctaactttcatcatcgg
gtaggtccattcagcatccaGCTTATATTATAAAAATTCGTTTGTAATGA
TTTTCGTCACTATGGGatttttttgttactttttaccGAAGAATCTTGTA
TCGATACAGACCGATAAGGTATTTGATTTAGTTGACTCTATAGAAAATTT
GTTGCGTCGAGATGGATTTCATTTGCCGCATGCCTTCAAATGATTTCAAA
TGCTTTTGCTGCCCTGCCAAAATAAGTTCACAACTATGTATACactcttt
taaatttcaaaCCTTGATTTTTGCATTGGATTCTcgtttttaaactaaaa
aatatcCTATTTATCCTGCCAATTATGAAAATTATcgctgaaattaaaaa
aagagcattgtcaaatttaaagtttttaaaatttctgcTACTCGCAAAAA
AGGTTCCCTAAGGGTACGTTAATTTGACATCTTTGGACACCACTGTAGCT
TGGTTTGGAGTTAAATACTGGATGAAATGCGTTTATTGAACGATATTTCT
TATTTTAGCGGGCCATGAAGTACATATTAAGTGGATCGAACAAGATTGAA
CCCATACGCACAGATGAACTCGTCATTTATCCATGTATCTTTTTCATTAC
GCtattttcatcatcatcaatttcgaaatttatttGTGTTGATACACCAA
ATGTTTATAAAACTGAAACTAGTATTCGCTGGCCTGAATGTATAGTCTTG
TGAATTGGAGTTTGGGTGGTAGGATATCTTGTAAGAATTTCCTTGACCTA
AATCCCAAAAAAAATCAGACAAGCGTGAATGGCCGAACGCGTCTAAATTT
GAATTCACTCGTGAGGGAGACACCTTAAACTGTTCACAAGATCTATATAT
GTTTTACATTGAACGTATTGAAGATAAACAAACACCAACAACACCAGTCA
CCATGAGAGCTCAAACGCGTGAAGAACAAATTGTATTGGTCGTGGATGAA
AAGACACCTGTTAATTGTAAGTTTTCACTCTCTTATTGGTTTATCAAGGA
ATATAAACCAATTTCGTTATTTTCGACCTTGGATTGCCTTTCCTCATAAT
TGTTCATAGTTTTCTAGATTTCTTCGTACTCTACTACAGTGGTGGATCTA
AGGCCTTTCAAAATTTATGGCGGAGAGCGTTTATATGTGAACCATAATCC
TTATGAGGATATTTCTCCGTCAGAAATTTTGAACCTTCTTTAGATCAGAT
GTTTCAGATCCGCAAATGCTTTATCTAATTTTTTAACATTCTTACGATTA
AGTGTAATTATATTCTCGTGGTTTTAATGGGCTTCGATAAGTTTTTAAAC
ATATTGAGTTATCCAAATGATCAATTTCAGTGTTAAGTTAGCTTGTGTTT
ATTGATTTTCAGCACCAGCTCAGAGAAGTATAGTTAGCACACGAAATTCA
GGAAAGGTATAGCAACAGAATATTCAATTTATAATTTTGCAGGATTGTTA
TCAGTTTGTCGATGGAAAGGTTCCTTTAATAAACTTTTAGTAATATGGGG
TGACTCAAAAAACTTTGGATTTCTGACGAACTTTTGAGACCAAACAAAGT
TATACTTTCTTTTTTCTAGTTAAAGTAATTTTGAGatcaaattatttctt
tttgtcCCAGGAAGTCGCCTAACGCCCTAAGTTATTTGAGTCAGTCGGTA
TAGTTTTGTTTCCAGAAACCTTAGTAAAGTTAATACCAATACTTTTACGT
TCAGCCACTCTATTTGCCGTTTTTTGCACCAGTTCTGTATCCATTTAAAT
ATCCCCACAGTAACAGACAGAGTATTTTTCATTAGTTTAGAGTGTCCGAG
AGTCATCAATAGACCATATTATTGAAAGTTCTCTTTATCGTTTTCCTTGT
GCTTCTGAATGCTGCTTTTGGcttcaattttgtcatttttttgtgtccaa
taagttttctttttttgggcTTTGGAATTTTTCCTGTGACATAGCAATTT
TACTGATGTAACTCGCTTCCTCTTAAGAAAGGTTTTTCAAAATACTCTTC
tttgtgataaaaaaaaaaactggacTAGAAAATCGAGGAAATTAGTGAAA
ACGTCATCATTTAATGGTTCAATTCCAATCTATTAGCCATACGAACCGTT
CGTAATGATGGTTGTGTTTTATCTACAGTacactctcgcttattcgaact
tctattattccaatcactctataattcgaacttgtttccagtcccGTCAa
tgagaaaccctcttaaaatactttctataatttgaatttttctgtaattc
gaacaaataagatttcccgttcgagttcgaattaacg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036551TCONS_00036551Clytia hemisphaericatranscript
TCONS_00036552TCONS_00036552Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036551-proteinTCONS_00036551-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001479supercontigsc0001479:30650..34286 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.21	0.78	1.29	0.88	0.19	0.11	0.38	0.76	0.68	0	1.34	0.55	0.8	0.7	0.09	0.05	0	0.03	0	0.13	0.37	0.27	0.13	0.04	18.6	20.06	0.21	0.33	0.25	0.3