XLOC_021540 (gene) - C. hemisphaerica

Overview
NameXLOC_021540
Unique NameXLOC_021540
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001477:14760..18675+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021540 ID=XLOC_021540|Name=XLOC_021540|organism=Clytia hemisphaerica|type=gene|length=3916bp|location=Sequence derived from alignment at sc0001477:14760..18675+ (Clytia hemisphaerica)
ttcaggATGGCGTTTACTCTTTCAACTTCCATTTCATCTTTGGGAACGTA AGTCAATACAGTTGATGTCCTCTGATTCAGCATTGTCAATCAATTAACAG TCACTTGACAAATTCCCTTTAAATTTCtcataaaagattttttatcGGAC ATTCTATCGCTATCATCTCCCTGGGGTTGGGGTAATTAAAATTCACGAtt taacgatttacgattcacgattTGCGATGCACGATTTCCGATCCATGTTC CATGCATAAATTATGCTGATTTATGCCTAATCATGCTAATCATaacaaaa tgatttgaaaacgGAGTTTAgttcgggggggggggcgacATTCTTGAAAG ATTCCCTATAAAGACCGAATGTTCTATTTCCTTGATTTTGCaataagtga agaaaaaaaattaNTTCGTGGATTGGAAATGGCCCATACAATCATCTTTG TGGATCCAGAAAACGAGGCCAACGCACATTTTCTCATCGAAGGAATCACA CGAACCATAACAAATCTTGATGTCATTTCAACTAAACCTTTTCCACTAAA TCCTTCCACGAGTATCgaaagagcttttcaaaaatatgtcgACGGGACTT TAGCAATCAAGACACACGTTGAATCAAGCAAAGACGCTGNTAATAATTAC TCCTGCATATAGCAACAAATGGGACGGAAAACGCATGGAAAGTGTGAGCT TGAATGATGGAACTACGCTCAGTTTTGGTGGTAAGTTTGATtcgaaattt tgttttcatataTATGGaagattttataaattttcaactATACAACTATA CAATCAAAAGCTCGCAAGTACCCAAAACGAAACATCCTAATTTTCTATTC TGGTGTTCTATATTTTCTGGACAAAAGCCTTTGAACATATAATCCTATAA TACACCCCTGTGTCACAGACCCGGTGGACCCTCACCCCGGTGGAAAAATA GGCCAAAAAATCGTCCCCGGTGGAAAAAATATCCTACAATTTCAACCCCA CTGCGAAATtactctatgattttatccccattgaaaactgaatgtaaaac attgcactccaaaaccatccccactggaattttcgagctggaaaaaatag attttcaatccccattggcattttgatagaaattttcatccccactgagg gaaaaagttctaccggggcactgagacaggggtgttataataATTGTAGG CCAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTATTTCATCATTCATT TGATTCAATGTTCAAATCATAATCTCATTTCATTGACAGTAGTGAACAAA CAGACGATTAGACACTGCTAGACAACAAAGGGCTAGCCATACGAGATTTA GTGTTGCGGGTGTGTAGTGGAAcgggttttgaaaaattttaggaAAACCG AAATACAGTAAACTCTCTTTAGTTCGAACCcctactattcgaatctttct ataattcgaactgaaACATTAGTCCGCTCAGTTGGAAAGTTAATTAAAGT ACCGTCCGTAattatcaaatctttttttaatttgaagaaaatcctTGGTC CCTCAAAGGTACGGGTCCTTATTTTACCCGAAATGCTCACTTTCTTATTA TCAATAGctaaattttgtcaaaatttcaagtcaatagcattttccAATCA CTAGATACGGTATCCTATGACTGATTTAGTTNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAAAATGAA AGTTTCGTGCGTTTGtttcatttgctttttatatttgatggTGGTGGGGT GACTGGTTTTTGTGGAAaagtgaatgaatgaatgaacgaatgtaatacac gtttttttttatataaggaacacgtttataaggaactcgaggctcaaaat ggtccaaaaaataaggaactgctcaagctgagaataagaaaacaagtttt aaggaacagtaagagatggttatccaaacttagcagctatgtaaataagg aactcgataaggaactttgaggctgaaattctctgtaaaaataaggaact ccaggctcagagcaaagttaaggttccttataaaaataataaaacgtGTA GGAGaaatttctagattttttaCCTTTCATTTTCTGAACCTCTGCTCTAG TGCtgtatattttagtgaaagtacGGGTGCAAAATTACATTTATTCAAGC taggattttttttaaataaaacttaGTTCAGCTTTATATGACGATTTGAG AAACACATTACATATTAGCACGTCTATTTTATCACAATTTCGTGATTCTT TTTCAGAATAAGGCATAGTTTTTTCGGATTGCATCTCAAGTAGTTCATGT GTACTTTTCTGTTTTATCTGTGCTGTTTGTGTAATAGTTCAcgcaaaatt tcacttttgacaaataattctattttaaaaactttttcgactttttcaca ttttgagaaatttttcgtggaatttattttttctcagaATGCGACCGAGT TTCGTTTTCcgcattgaaaaaattaatttccttctgaacaaaagtttttc atctaaaccaaaaaaaattagttcatCAATCTGGAAATAAATTTCCAATT CCGtttccaatttttcagctttgaaTCTTTTTTACTTCTTGAGAtctaga tcttcatttttttctaacttcaatttttttaccgtctcaaataaaaatga tttctcgctgagcaaaaagttttttttcaaaattcaaaattctttcGCCA TCAAttcggaaatatttttctcgttctgtttacaaaatttcagcttcaaa gtatttttagttCCTGAGATATCGagattcattttttgttgaattttttt ttttactccgtgaaaagtttgaatttcttctttttttcttcagatgtttg gaaaattttgttggaaaagaatttcgcgaaattcgaagaaattttCCGCC AAAAACCGAACATCGTCTCGTTGCGTCGTGATGGTTGGACACTTCTCATG AGGGCTGTTCGTGGAGATCGTTTCGACGTTTTCGTTCACTTGATGAAATA TCCTCAAGATTTTTCACTCGTGAACAATAATGGTATGAACGTTCTTCATT GGGTTGGTTTGGTTGGAACAGTTCGTCATTTGGAACAATTTGATCAACAA ACAATCAAAAAGTTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036524TCONS_00036524Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036524-proteinTCONS_00036524-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001477supercontigsc0001477:14760..18675 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.2 0.27 0 0.22 0 0 0 0 1.04 0.65 1.04 0.3 3.07 2.12 2.19 2.27 0.78 1.43 4.2 3.76 2.5 2 1.65 2.67 0 0 3.08 4.51 3.39 1.73