XLOC_021491 (gene) - C. hemisphaerica

Overview
NameXLOC_021491
Unique NameXLOC_021491
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001464:12917..17250+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021491 ID=XLOC_021491|Name=XLOC_021491|organism=Clytia hemisphaerica|type=gene|length=4334bp|location=Sequence derived from alignment at sc0001464:12917..17250+ (Clytia hemisphaerica)
AAAATGTACATCGGATATTTAAAGGCTGGCATGTTTaacttgaaaatcat
tttatttGAAGTTGACACCACACGTGGAGGAATATACATACAagacagaa
aaaatattttaaaggtaagattcttttaatttaccATAACTGCAGAGAAC
GACGTCAACTTTACCTATTGGTAACAACGCCTTTGTTTCATTGATccata
aaaaacattttgccgGATGAGGAACTTAAAGGAGTAAAGGaactaaatat
ttttgttgGGGGTGATTTCAGACTCCAGCTTGGAGCCAAGAAATCGAATC
TTTATTCTTTTGTAATCTAATGTACTTTTCTGTGGGAATTACAATTAATA
AATAGTTAGAGGGAGTTTAGATGATTTAGGGATAAGAGTTTAAGGGCGGG
GCCACATTATTATATTTGAATTAAGATCTAAGTTTGCTTTGATTGTGATT
TAACATAAAGTTGTTTGTACAGGCCTGTAAACGGGGTGGAGAATTTTTAT
TCAGAGCCTGGTTGATGNGTTTGACATAAAGTTGTTTGTACAGGCCTGTA
AACGGGGTGGAGAATCTTTTATTCAGAGCCTGGTTGATGTTTTAATTAAA
CATGCCATGATTTAAGGGCACGATAAAACTTGATGTATTTAAAGCCTCag
tatactttttattttaaaagtcACGGTGAAATTATTCTGTGAAGGGGTTT
TCCTTAAGGCCCCTAAGTATCAGGGTTTTCCTGTATAAGGGCGCTATCCT
GTTCGTAgtgtttgaatttgaatttacaTCTCATTGACAATTCCTTACAT
TTTATGATTTATTTGCTAAAGAAAATATCGCAGTCATTCATTGaccagaa
aaattaaaaaaatgaaccGAGGAGGAATCAATCAGACAGGCGTGGTTGAA
AAAGCTTCAGCAGAACGTTGAGGGACATTTTGAGGCGATTTATTAtgtag
cctatttcataggctTCGTGTTTTTAGTAAATGATATTCATTACAGTAAT
GAAACAGAAAATCAATTCTTTCAATGTCTTTCTTGAAGGGAAATCTGCAC
AGATTTatgcattttgatagaaaatagCATGTTACAACAGATGCATGAAT
CCTATGCAATAGGCTTATTGGGGATGATTCTTGTCAGCATTCTAACCAAT
ATTATAGCCCGCACACTAACAAAAATCAAGACGAATTATTCAGGAAGGGG
TTAAAAACACATTTTGATGGTAACaatcgaacaaaaaaaaaacctttaaa
aaaagggTGTGGTCTTTTCCTTGTACACTCAATATCAATTGACCAATAGA
CGCCAAATTTTacttctttgttgtttttctgaCAAAGTGTCTGGGAATGA
CAGAAATTGCATCATACTGCTTACTCAGCAATTTGAATCAAAAGAATATA
CTTTGAATGAAgttgaaaataattgaatatCGTTTTGATGACGCTGAATG
CTATTAATCAACGACAATATTTGCACAAAAATTTAAGAGGACCATGATAA
AGTAGCGCGTCTGGGTTAACAATAAGAAATTCCTGAAAAATTTATTCCCt
agaaaaatttgtaaatttgaaaaatccctatcAATAAGTAATGAAAACAA
ACGGGACAAAAAACGgatattgtttattttgtttgttaCCGCAATATTAA
ATTGCAAGAAACCGCAAAAGTCATTACATTTTATGTGTATGGTCCATTTG
GAAGGCTTGCCCAAACATGtgtctttttgatttgatgCTTGAGTGACATA
AGGTTTAATCTAAGGTAGGAAATTGTGGCCGCTAGGCCCCTGGGGTTTGA
GATGTACTAATTTCCTATCGATATGGTGTTCGGGTGTTACTTGCAAACTA
ACagtcttctttctttttaacatcATCTTTCCTCTATTGTGGCAAAAACT
AGCTACCCCTCCATATCGTCAGAGACAACTCTATATCTCTTTTCATAAGC
TTTGATGGAAAATATTACTGAATTTTGAAGGAACATGAAATTAAgctttt
aagattttaggggaAAACGGTTCATGTATTTTTGAAGTAAAGtctgtttt
gtatttttgaaggaaaatctatttatttaattttgaagTGAAGTCTGttt
atgtatttttaaaggaaaatatcaTTATGTGtcttgaagaaaattttttg
atgcaATCTTAAGAAAAGGTGTTGTCTAAATTGCACCattaaaattggtc
aaaattgaccttGTTTTACGCTACGGTTTCCTTATTAAATTTATTGACAG
AGAAAACTTTTACGGTTTTTTAATTAAGTGTTTCCGGCCAAAACAAGAGG
TATTACTTCTGCTAATGCATTTCAAATGGGCCTGTTTTTAGAtgattttt
ttaagatgaaCTAATTTAGAGTACAGAATATAGAATGCTTCAGTTCTTTG
TGTCCAGTGGAATCGATAGTGCATACACGGAAATGTttccatattttgaa
aatggtattaGTTATAGGAAAGTATTTATTCCCGAAAAGCACATCCTTAC
TAGGAATATAAGATGTTTTTCGGGTCACATATTTTGGTGTGATGCATAAA
GTTTTAATTGGTGATTTTAAGCAATGTGCTTTAGACCATGGGGAGCACCA
TGCTATCCTTATTAGGAGAACTTGATGAAGATGTTATTCACTGTCACTGA
GTTTCaatctcttttattttttgaagctGTATAATAATGTTGTGACCTGA
GAGAATATGAGTTCTCTTATATCGGCCAAGTCTCGTGATTATTCTTTATG
ACATAACTTTTGCGTTATggataaaatttaaaatctgatgggtGGTGCCT
TCAAATATGGCAGAACAGCAAAACTTTACTACAATATGAGTTAGATTAAT
ATTGTGGGTTGCGTGGTATATTGAGATCATAGAGGgctttttatattttc
tctGTATATATTAATGGCTTTTGGCTTTGTTTTCAAGTATTCAATCAAAA
AAAGTATGGGATTTCTCGGTTTTTGGGCCGTTTCAAAGCCAGTTAGTTGT
TGGTGTCAGTTTGAGCTTAACAGTAATGTAGCATTTcccttttcttttgt
tctttttagaACTAAGATGAAGAGCACGAATTCAAGAAGCTCAACACAAA
AGAATATTCTCACCCTCTTGGTAACCATGGTGATAATGGCAACGCTGGTC
GATTCGTTGCCAAGGAGATTGATTGGCACCGCTGATAACCCTTGCAGAAC
TATCCCCAAAAATGGTGAAAGCACATGTCTACCAAATAACATCTATGGGA
TGGAACTTCCAggctttaaatgttcttatgacTCAAAACTTAAATCGTGC
ATTTTGAAATGCTCAAAACCCTGCAATGACATTATGAAACTTTTTCGAAA
GCTCATCCATGAAAAAAAGATCGATAAAAGGCTGCTGTAAAAAgtcattt
agaaaaaaatatttagatgaattatatatttctttttcaaaaaaacagaa
aaattagaTGTACTTTATAAAATACCATTTTATTGTAATTTTAGGCACTT
TCACCACATTATTTCTAGAAGTTTTATTTATGTATAATATTGATGACttg
cttttttgtaaaaataaaaattttatatataggTATTGAAGATATATTTG
GTTACTAGtcctagtttttttttaattttacccCCATAGTCAAGTAGAac
attatttatattttttatatgaaacttatttaaaaagtgaaaatgataTC
TAGAACCTTAATAATTAAAACGTCTCAGAACCATGTGTTATATTACCAAC
AAAATTCACAATCCTTTAAAACATGGGGATGTATCAGAGACCCGGTAAGA
AGACCCTTGCataactgaaaaatttggcCGAAGTTTTGTCTCCGGTTggg
aattgactttgattttatccccatttacAAATCAATGGAGAAAACACGGT
TATTTGAGcctgggaacaatagaatttctatccatATTGagcttttgata
gaaatttttatccctacctgtgggaaaaagttcatCAGGGCNTGTGACCT
GAGAGAATATGAGTTCTCTTATATCGGCCAAGTCTCGTGATTATTCTTTA
TGACATAACTTTTGCGTTATggataatatttaaaatctgatgggtGGTGC
CTTCAAATATGGCAGAACAGCAAAACTTTACTACAATATGAGTTAGATTA
ATATTGTGGGTTGCGGGGTATATTGAGATCATAGAGGgctttttatattt
tctctGTATATATTAATGgcttttgtctttgttttcaAGTATTCAATCAA
AAAAAGTATGGGATTTCTCGGTTTTTGGGCCGTTTCAAAGCCAGTTAGTT
GTTGGTGTCAGTTTGAGCTTAACAGTAATGTAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036463TCONS_00036463Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036463-proteinTCONS_00036463-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001464supercontigsc0001464:12917..17250 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.85	0.61	1.16	0.76	0.73	1.81	0.19	0.45	1.74	2.18	0.27	0.19	0.41	0.09	0.56	0.98	0.94	0.48	0.17	0.28	1.33	1.04	0.49	0.4	0.07	0.14