XLOC_021484 (gene) - C. hemisphaerica

Overview
NameXLOC_021484
Unique NameXLOC_021484
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001463:1..4679+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021484 ID=XLOC_021484|Name=XLOC_021484|organism=Clytia hemisphaerica|type=gene|length=4679bp|location=Sequence derived from alignment at sc0001463:1..4679+ (Clytia hemisphaerica)
CAGATTCCAATGATTATCTCGCCATGGAGATTGTGGCTGGTTTACTTCGA TTCCATTACAAGCTGAGTTCCGGTGATGCTCAGAATGTGACCATCTCAAA ACCATTGAAAGCTAAACAGCCATACAAGTTCTACGTTAGCAGGTACTGCT TCATCAACCTCGTTTGTGATGATTTGATCACCATAGTAACACTGACTTTA AATATATCGTCAATGGTTCTTACAGCTCTTCTTGTTTTCACTTCAACCTT AgttttttcgtttaaattttataaatatgTTTTTTCCTTCTTTAGAAACT TTGGAGATGCCGAGNAACCATTGAAAGCTAAACAGCCATACAAGTTCTAC GTTAGCAGGTACTGCTTCATCAACCTCGTTTGTGATGATTTGATCACCAT AGTAACATTGACTTTAAATCTATCGTCTCTTTTTAAATGGTTCTTACAGC TCTTCTTGTTTTCACTTCAACCTTAgttttttcgtttaaattttataaat atgTTTTTCCTTCTTTAGAAACTTTGGAGATGCCGAACTTCGGTTGGTAG AGTTGCTCCAAGACGTCAAACTTGGATTCGAAAACGCCTCTACTCTGATC ACACAAGAACATGAAGCACAAATCCCTTCGCCTATCTTGAGCCTAGGGAA GAAGAGCGATCTGTTCTTAGGTGGTGTACCATCAGGGAAGAGCGTTCCAT CAGCCCTGGCTTCCACAACGTTCAATGGTTGTATGGAGGAGTTGAAATAT GATTCTCAACGAATGGGATTATGGAACTGGAAGGTAACAACACTCTTAAA TATCTTTTAAACTGGCACTTCAAACCCCGTCTATTAAGTATAATTATATT TAGTATGAAGATGTTTTCTATCATTTGTATTGTAAGCTGTACCGCTTTTT TCAGATTTCATTGTAACCAGATATTTATAGAGTTAATGTCCAATGAGCAA CTTTTACTTATATCCACTTTAAACCAATACACAAAAACACCCTTTCTTAT TCATTCATTTGCAGGAAGCGAAATCAGTTGCCGGGTGTGTCCAAACTGCT CGTGAACCGGATGATGGTGCATACACCTTCAATGGTGCCAAATCCTTCGT CAACATCGTCAACAATGTCAGTCCTCTCACATTTGGTTTACAACGAATCG ATCTCACTTTCTCAACTCTCGATAAAAATGGTAGGTGCTACATCGTAATC TTTCTAGAAGTGTTACATCGTAATCTTTCTAGAGGTGTTACATCGTAATC TTTCTAGAGTTGTTACATCGTGATCTTTCTAGAGGTGTTACATCGTAATC TTTCTAGAGGTGTTGCATCGTAATCTTTCTAGAGGGGTTACATCGTAATC TTTCTAGAAGCGTTACATCGTAATCTTTATCCTGAAAGTTTAGAATTTGG AATCTTAAGGTACGCTTGCCAATGCGATTTGAATATTCCCACACGAATTC CCGTTGTTTCTAAGATTTTGAAAGATGTAATGATAAATAAAGATGACatc tatccgcagacacgtgtttcgtcCTGCATCGGTGCGGCTCgggtaagcga gcatagactgctgttgtcaccagagtgTTCAAAACACTAAGTGTTGAGAT TCGCATAATCACTTGTGATGAACGGAGAAGCAGTCTATAGACTGCTCAAA GAACCGAAGTTCTGAGCGTAATACATCGAcaaatttcttctatttttctc TACTAGGTCTACTTTTCTTGGGAATGGATCCGCCCACCGCCATGACTGAT GGAAATCTGGCTTTCGATGCAACGCCTACCAATTTCTACGCCCTTCAACT AGAAGATGGCTATCTAGTCAGTTTGTTCGATTTTGGAGTCGGCTTTGAGC GCGTGGTTCACAACTCCACCGAACTAAGGATTGGAAATAACGGTCGAGTC AATGACGGTCAGATCCATAATATCACACTTAAAGCCAAATCAAAGTTCGT GCGAATTTGGATAGATACAACACGGGAAGGGCCCAAAGCTGCTGATATCT CTTTAACGTCTGGAAGTGGATTACGTCCGAAATTCAAAGTTTCAGAAGCT TACATTGGTGGTTTGCCAATGAGAGGCTTCAAACCTCACACGTAAGTGGA TGGTGCTTCTCTAtaacattcatctaacgttatatgaacgttaggGACGT CAGAtgaacgttatatgaacgttaggGACGCCAGAtgaacgttatatgaa cgttaggGACGTCACNAACGTTCAATGGTTGTATGGAGGAGTTGAAATAT GATTCTCAACGAATGGGATTATGGAACTGGAAGGTAACAACACTcttaaa tatcttttcaacgggtACTTCAAACCCCGTCTATTAAGTTTAATTATATT TAGTATGAAGATGTTTTTTGTTCTTTGTATTGTAAGCTCAACCGGTTTTT CCAGATATTTATAGAGTTAATGTCCAATGAGCAACTTTTACTTATAGTCA CTTTAAACCAATATTCCAATACTTTATTCGTATTTCTGAAGCAAACCGTT AAACTTCTTCACATAATTTCCTCTCTCCCTTTCAATTTATCTACCTATCT TCTCACTTGTAATACAAGTGACAcaaaacacccctttcttattcattcat tcacagGAAGCGAAATCAGTGGCTGGATGCGTCCAAACTGCTCGTGAACC AGATGATGGTGCATACACCTTCAATGGTGCCAAATCCTTCGTCAACATCG TCAACAATGTCAGCCCTCTCACATTTGGTTTACAACGAATCGATCTCACC TTCTCAACTCTCGATAAAAATGGTAGGTGCTACATCGTAATCTTTCTAGA GGTGTTACATCGTAATCTTTCTATAGGTGCTACATCGTAATCTTTCTAGA GGTGTTACATCGTAATCTTTCTAGAGGTGCTACATCGTAATCTTTCTAGA GGTGCTACATCGTAATCTTTCTAGAGGTGTTACATCGTAATCTTTCTAGA GGTGCTACATCGTAATCTTTCTAGAGGTGTTACATCGTAATCTTTCTAGA AGCGTTACATCGAATGTTTCTAGAGGTGCTACATCGTAATCTTTCTAGAG GTGTTACATCGTAATCTTTATCCTGAAAGTTTAGAACTTGGAATCTTAAG GTACGCTTGCCAATGCGATTTGAATATTCCCACACGAATTCCCGTTGTTT CTAAGATTTTGAAAGATGTAATGATAAGAAAAGATGACatctatccgcag acacgtgtttcgtcctgcatcagtgcggctcgggtaagcgagcatagact gcTGTTGTCACCAGATTGCTCAAAACACTAAGTGTTGAGCTTCGAGCTTG AACGGAGAAGCAGAGCTTGCTTTTCAACAGATTCTATAGAGTGCTCAAAG AACCGAAGTTCTGAGCGTAATACATCTGAcaaatttcttctatttttctc TATATTAGGTCTACTTTTCTTGGGAATGGATCCGCCCACCGCCATGGCTG ATGGAAATCTCGCTTTCGATGCAACGCCTACCAATTTCTACGCCCTACAA CTAGAAGATGGCTATCTAGTCAGTTTGTTCGATTTTGGAGTCGGCTTTGA GCGCGTGGTTCACAACTCCACCGAACTAAGGATTGGAAATAACGATCGAG TCAATGACGGTCAGGTCCATAATATCACACTTAAAGCCAAATCAAAGTTC GTGCGAATTTGGATAGATACAACGCGGGAAGGGCCCAAAGCTGCTGATAT CTCTTTAACGTCCGGAAGTGGATTACGTCCGAAATTCAAAGTTTCAGAAG CTTACATTGGTGGTTTGCCAATGAGAGGCTTCAAACCTCACACGTAAGTG GGTGGTGCTTCTCTAtaacattcatctaacgttatatgaacgttaggGAC GTCAGAtgaacgttatatgaacgttaggGACGTCAGAtgaacgttatatg aacgttaggGACGTCACATGAATGTTATTTTGACGTTCTACGTCAGATTT TAACATTCACTCAGTTCgagattttttatttccttaTGCTAACTTATTGA TGAGCGAAACTTGAAGCAACGTGGTTAACATTAAAGGCAGGTTCATAGGT GGCCCGGTATATGGCGGTTCTCAATCTTGAGCTtgtgcttaggcggactg taaagaTAAAAATAGGATGGAGCAATATTTTCatttgcaaatctgttatt catttttgtttcccattcttaattatatttttcaactccaaGCAGTTTTT TTGCTGTGTGAAATTTTTGGGATTTGTGTTCGCCGAAATGGCGAACTCTT AAgttgctcctagtctacttcacctgaatcagcgtcatcaaaaattatca gaaagcaaagttcagtcagaagtactAGTCCAtaagacaatttttttgag tttttgagttCTCCGATTTGATGATTGCTGACGTTGTAGAATCCCATTTC CGTAGGAGACGAAATATTCTTTCTAAAAGTATCTTCAGTGGATTTTCGAA TTATTTTCATAGCGGTATCACAGATGAGAGTTTCATTGGTTCCATCAAAG ATGTGAACTTGAGAGGTGGAAGTCAAAAGGTCCTCACTGGCTTCAACTAC AATGTCGGATTCAAAGAAGCTGTAAGTTGGGTGGCACAAATTCTTTTACA AAAGTCCAGACTCTTCTTGGAGGAGTCTTAACGCTGATAAGGCctttgtc ggggaaaatttGGGAGCGATTAATCACTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036447TCONS_00036447Clytia hemisphaericatranscript
TCONS_00036448TCONS_00036448Clytia hemisphaericatranscript
TCONS_00036449TCONS_00036449Clytia hemisphaericatranscript
TCONS_00036450TCONS_00036450Clytia hemisphaericatranscript
TCONS_00036451TCONS_00036451Clytia hemisphaericatranscript
TCONS_00036452TCONS_00036452Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036447-proteinTCONS_00036447-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001463supercontigsc0001463:1..4679 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.74 1.52 1.22 0.5 32.06 26.34 51.87 67.49 10.97 21.99 21.76 6.87 27.88 37.5 12.54 21.29 27.39 31.1 25.35 19.01 47.34 36.05 11.8 17.93 37.42 32.13 2.33 2.76 53.54 65.55