XLOC_021368 (gene) - C. hemisphaerica

Overview
NameXLOC_021368
Unique NameXLOC_021368
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001439:3679..7721+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021368 ID=XLOC_021368|Name=XLOC_021368|organism=Clytia hemisphaerica|type=gene|length=4043bp|location=Sequence derived from alignment at sc0001439:3679..7721+ (Clytia hemisphaerica)
AGGAAAAATTAATATATTGTTACAACTTCGGACGTACAAGTACTGatata
aataaaatgaaaaggcTATTTGATAACTTTCGGATAAACAAACGTTCGAA
TAAATCGAATGGCGGACCTGCAAGGACCAAAGAGAAATGTGTGAACATTC
GAATTCCCGTGTTTCAAACTTCTCAATGACGTCAATCAGCAACATACAAA
AAGTATCAGCTGTTTAATTCGAATTTTGTAATGACGTCACGAAGTTAACT
GGCTGATTATAAAAGGGCGCGAAAATAATAAATCACTTTCGCTTTTGATT
TACAAAATTGTGACGAGACTTGTTAGTTTAGTTCAAAAATCAATCAATTT
ATCTATTAAAATGGCCGcattaaaaaatattcttttttactGTGATTGTG
ACAATTCTACCGTCATTGTGCCTTTAAAGAAGGTGACTTGGGAGGAAGTT
GGAAAAGTTGGACACTTTATGGACGGAGATGAGAAAGTTCGTGGTGAAGT
GCTGAAAATGGCCGgtaagaaaacatttttcgtgTACTTAATAGGCTTCA
AATACttcaggcgtacaaactttcacaacatttttcaaaatatgcatATT
TTACGCGATTTGCGTAAGAGATTGTGATTTTCAGGAAAGACCATTATGCG
CGAAAACTTTTTTGAACTTTAAACTTTCATGgaactttttagcctgctag
aaCAAAGAATAAATGTTTCAAGCTGAACCAAGGAGTTTGTCCCCCTAAGC
CACTTTTTCGTgagaaaattctcaaattttcatctaaattcgcgaaagtt
tgaaCGCAGAAAGTAGTTCGTTCGTCTTGCAGTAATACGGTACATTAGAT
TTCTTATTATGAGAAAGTCCTATTCCGAAGCGCACACAATTTCCCCCAGA
AAGCCTCTTCTACACTTTACAGATCATCTAAATAATGACGCAATGTTTTA
CTGATTTTTTAATTCTTCGGAATGGGACCTTTCTCTCACTGTTATTATAA
AAGATCAACTAATTTAGGAGTACACACTTTTGCAaggcaaaataaaaatt
ttcgactttttcgcaagcataaacttacaaaattaaattgcaaaaatttt
cgaaacgagaaaagttgaaaaggtCATACGGCTAAAacttctttattttg
ttttagcaACGAAGAAAGAGTTGATCGAGTGGGAGAAGACTGAGAAAACC
AAAAAAACCAACACCAAGGTATAACAATAATTTATTTAAGACGTTAAGAT
GAGTGGACGTATACGTTGTCTTCTTTCGTTGTCTTCTTTCGTTGTTTTCT
TCCTCCCAATGCACTAAAACAAGAAGGGTAGAATACATTAATTATGCCGA
ATCTTAATGCGAGACATTTGAACTTCACTGAACACCTTACCTCTCTTAAA
AAGTTACAGCACTTTGAAGTTTAGTGATCTATAGCCAACTATGTTCTGAA
AGAATTCTTCGTGTACAGACTTGTTTTAgaattagaatttttaaatggtc
aattaaagtctgtctcaaaataatttgcagctgagtcaaaaatggctgta
acttttgatataattcAAATCAAGTTGCGAtcttgtgctcgttgaaaaga
tattttagagtggaatattatcaagcaaaaaaatacggaaaaaaaggaaa
aatgaaaatgaaaaaacttcttgtagaaatggggtataattaccattttc
acaggagttatgatctaagattgaagaatcacccCTGTGAAAATGGTGAT
TATACcccatttctacaaaaagttgattttttactcctttcatttttatt
ttttcaacgagCACGAACTCGCAACtcaattcgaattctatcaaaagtta
tcatttttgcctcagctgcaaattattttgagacataATTAAGGTCCATA
AGATTACAAAAACGAGTGATGATACTTTTTTACTAATTTGTTGGTCCCAT
GTGACGTTTTCACTTTTGCTGGCGTTtgaaaattcaagttaaaatcaGAA
GCTCAgatatggctcaaatgaaaggCATTTATCCaagaattccaaaaaat
atcacaacatatatctgaaaagcaatatttgagaagctatgAATATAAAT
AGCAAATGTATGCCCCTTGTCTCATGGCATGATTTTCGAAGTAGTAGAAA
AAACttcatcttttttaaaaaatcctaaaagtATTCTTCTTATAATTACC
TTTCTAATGGTCGATAACTTTCTGACATAGCATGAATGGGTTTTTTTAGA
CATGCTGAAGTATTTTATCAAACCTTTACTTTCAGGCATCAGCCAAAACA
ACCTATGCTGAGGTAGCAAAGACACCAGTCAAACCAAAGACCAAATCAAC
AGCAAGTACTAAACCAACTGTTGCGAAACCGATcatcaaaaaaacaaaga
aaagattaaCCAAGGTTGCCAAAGCAAAAGCAGCAAGGTCAAAAGACTGT
GAAGTGGACAATAGTGGCCCTGCAGAGGTAAAAACAGACAACTTACTTTT
TCCAGATTAGGGACTTTCGAAATAAAGTTTTTATTCAGCGTTTGTGCCAG
CATTGAACATCAACTGCAGCAACTAAAAAATAATACAAgtactattttaa
attttgtcaaaaaaaaaacaccctgGTATTCAAAATTCTTCTGTATAATA
ATGTCAATAATTATCTGGTAGGtagaaaattgaaaagagagcggtaaaag
aattttcttgattttaattAGAACCACTTTTCTTTGATTCAAAGAGGGCT
ACAGCTAAAAAAATACTGCAAATTTTACGTTTGACACAAATCAATgtcaa
tttcaaataaaattaaaacagtTTCATGATCAGACAAGCTTAAAATTATT
TACCTTTATAAGCAAGTGATTTTACTCTTCTTATTCTTTATACGTTGGGT
TGGGGGTGATTTGCAATCTTCTTAGGATCCATCAATACAGCtagtaaata
aaagaaaatacattaaaggaagagaaagaaattttaataGAAAATCTAAT
TCTGCCATGggtattcaaaattaaaaaaaattgttgattcgccaaaataa
gttctaaaaaattttctggtttgcgagaatttgaaaaaaaaattgaattg
actcttcgtcaaaattagttcaaaattcatttcaattttaaatctgtttt
ggaaaaattatgaagattcaatgataaaaatttgtcctttgaaattattt
aatcAAAAAAGTTGCCCAAAAGAATAACATTTACAATTTTAAGTATATGC
ATTTCTAGCCTCGTGAGATGAGTCAATCAGAAAGGGATGCAATCAACAAA
TTCAATTTGAAGAAAGACGCAAAAATGAAGGAAGTGAATGGGTTTATGAT
AAGACGAGTGCAAGTTGCAAACAGCATGGGCAACGACGGTTTCGATCCAT
CCAAATCTCTTCAAAAAACACAACTCAGGGCAAAAACAACACCAAAACCC
AACACTTTAGAACGTACGACACCAAAGACTGCAGAACCAATAAAGCCTGT
CACTCCAGAACTCACTCCAGAACCATTAAAGCCCGCCACTCCAGAACCAG
CAGAGCCTATCACTCCAGAACCTGTGAAACCAAACACTCAAGAACAACCA
GAACAACCGAACTCTCCAGAACAACCAGAACAACCGAACTCTCCAGAACA
ACCAGAACAACCGAACTCTCCAGAATCAGCAAAACCCAACTCTCCAGAAT
CAGCAAAACCCAACACTCCAGAATCAGCAAAACCCAACTCTCCAGAATCA
GCAAAACCCAACACTCCAGAAAAAGCAAAAACCAACACTCCAGAACCTTT
GAAACCCGACACTCCAGAACCTTTGAAACCCGACACTCCAGAACAAACAA
TTCACCTTGAGCCAATCAAACCAATAACACCTGAACAAGCCACATTCCTG
AGAAACAAATCGAATACCTCAGTTGAGCACAATTGGACACTTCCTGGAGC
AATGCCTTCCTTCAGTATTGCATCCACTCCGAACATGACACGGATTCCAA
ATTGTAATTGCAACTTGGTCAAAGTGATGCAGTGGATGGAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036309TCONS_00036309Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036309-proteinTCONS_00036309-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001439supercontigsc0001439:3679..7721 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.03	0	0	0.04	0.03	0.18	0.03	0	0	0	0.07	0.11	0.11	0.1	0.24	0.34	0.31	0	0	0.41	0.26	0.11	0.18	0.09	0.1	0.7	0.29	0	0