XLOC_021288 (gene) - C. hemisphaerica

Overview
NameXLOC_021288
Unique NameXLOC_021288
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001424:28493..32024+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021288 ID=XLOC_021288|Name=XLOC_021288|organism=Clytia hemisphaerica|type=gene|length=3532bp|location=Sequence derived from alignment at sc0001424:28493..32024+ (Clytia hemisphaerica)
GGTAAGAAGAATGTACCAGTTCGCACACCACTGAAACCGCAACAACCTCC AAAAGATAAGGTACATTTTAAGGATGTAATCCTTGTCACTTCACAAAAAG TACGAACTGTTCCAAAAGGAGCCTTACTTGAGGATTTGCACGATTGTGGT TTTGTAATCACTGGTTTCGAATTGCACACCAATGACACAGAACGTGATCT GACGATTAAGATGAACAATTTgtttaaagaaatatttgattNCAATGACA CAGAACATGATCTGACGATTAAGATGAACAATTTgtttaaagaaatattt gattTACGTCCTGAAACTATCAGCAACTTTGAATTTGTTAGAGCAATCGG AAAAGGACTTGTTAGAATTAAAACCACAGGACCCTTAAATGTAGCCTAGT TAACtgagcccgtattcacaaggctaggacacacggcttatggcgatata gcgttttcggcgcttgaagattttttatatttacggattttaagtttgcc ttggaatactggctTAGGGAAAGGGCGCGTTCATAATATGAACGCAGGAT TCGGTGAGCTTCTGATTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNag tttataattattttatcagaaaacgagtagaagaggatgagactcattga atgcaagatctttcttcgattatattatgatgtgagactattaccaCGTC TATTACCATGAGAGAGCCGAGAGATATATTTCATTTGGAATtctgtatca gaaaaagttttcaagacctgatcccgacctgatagtgcatctcttgtttt tgggaagaattgaactgatgaagaaaaaagaatgctattcgtcgtaaaga cagcaaaagttgcttgtttccagaatggcaaataataaagtaaagatttg tgattgaacattgactatcgagagagtacttgtacagatcctatgctgta gttctgtattctgattggattgcatgacatgatattttattatactgtaa tggatagatgaAAGACAGTTCTTGGTCTTTGACTGGTTttggtttcttgt tgttttatgaatttgagactttatgctccattttacagacaatgacatct ttcattttcgaagaacataaaattgtcggtgcttattttcagtgtCAGCT ATATGAATTCAAGACtcaggaaaatgtttttttttgggggggggggatta attacattgttttgtatacggtaatttagcctgctagtctaaagtaattt ttattcattttgttgaaggttatttttatgatgagctttgtaaaaatcat acaaaataattttatgtcaaattgtcaaatcacaaaattatcactcaagg aacgaatttgtctcttgttgacttttccataaaatacgaacataactttt tgaaaaaaatgaacaaatttttccttcactctccatcggcacactttaca atagaatttcattttatattttacaaaaggagcgcataaactgtaagacg gagagtttgtttatctgatcttacaataagagccaatcagaagatagaaa aaaagataaaataaaaaaattctaaataatgttttgatattgtgttctgt gtgtggtgtgatttcatatttttgatacgaaacgaattaagtcaacgacg aataattatgcaaattatgtgagtttacgttatccctcgccgcgaaattt gaattgtcgttgttgtcgttgttgataagctaccgagtttactgtcccta agctagttattcagtcacaacttaaccatcagatttatccaagtgactga atcaaactagcttagatttctaggctaNGACTTGTTAAAATTAAAACCAC AGGACCCTTAAATGGAAGTAAACTTCACTCTATAACTAAAGGTAAAAATG AACCGATATACATTAGATCAAAAACCGACTTTAGACACTTGCTTACTACA AAAGATAAGCTCTGGCCTTCAGAGATTAGTAGTTCAAGTGAAAGTGATGA ATATGAAGATCCTGTACGCAGAAAGCAGAAGCTGGAATCATGTGAATGTC CAATTTGTCAGAAAGTTTTCCCATTAGACACTATCAGTGCCAATGCAAGT AGTTGTGGTGAGGTCTTCGTAGCAAAATCTGCCACCAAAGGCATGCATAC ATCAACTGCTACAAGACCCCAAACATCAACTGCTACAAGACCCCAAACAC CGATTGAAACAAAACCTCCAACATTGACTGAAACAAGACCTTCTGCATCG ACTGGATCTGGATCACTCCGTACTCCACCAGCTGCTATTGTCCCTAAGAC TTTAACCTTTGAAAGTGAGCTGAAAAAACtgcaaacaatttttcaatgta GAACGGAGAAAAATCTCAACTTGAGACTTAAGAATGTGTATGAAGATATG GCCAAAAAGTTTAGACtattattcaaaacaaaactttcacCCGTCACAGT CACCTTTTTCGAGGAGGTAGGAGTCGACGATGGTGGGTTGACACGGGAAG CCTTCTCCAAAATTTTTGCTACAGCTAATCGTGAGGTTCTCTGTTGAATG GAAAATCGATTCACATTAATTCACGACAAGATAAAACTGGAGGCAGgaga ttttttcatatttggcCAGATACTCAGCATGGCTTTGCTGATGGGTGCTT CTGGCCCACATGATCTTTCTAAACCATTCGCAGAACACCTCCTTTCTTTT AAAGAACCCAATTCGTACGACATCAAAGATATACCTGTGGCGGAGGTGCA AGAGAAATTGGTTGGGATTAAGAACTGTCAGACTAAGGAGGAGCTTGACG ACTGTTTTGCTTCATTTGATGAAAGATTTGAAGCTGGGTAAGTTAACTAT TACTACAGTGCCTCACCTAAAAACTTCTAGAACTTTTCTCTTCTCACTGG TCAATGGGCAACTAAATTTACTCTTCAGGCTCATTTTCAGTGAGGATCTT TAAACAAACAGAGGGGCTACTTTCCACCCCACCTTACCATAGCTAGATGG TGGGGGAaacgattttccaaaaaagtcgAAAGGGTGGGTGTACAGATATT TCTTGTTCGTTTTTCGTTTGCTCATTCGTTCCTTTTTCAGAATCTTTTCC ATTAATGTCTATGTTTTCTCTCATTTggctaactttcatcatcaggtagg tccaatcagcatgttgcttgttgttATTAATaatggatttttaaattttt ctcttgTTTCAGCTACAACAAAATGGTCCTCAATATGGATGAGCGAGAGC ATTTTTGTCGATTAATATCTCgtttttttattgttgaaaGAAATCACGCT GAGATTTCGCAGCTGTTGAAAGGAGTTCACCCTGACCTCCTCTCACTAAT GAGAAGATTCCCTGAAGAAGGAATCAAAGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036195TCONS_00036195Clytia hemisphaericatranscript
TCONS_00036196TCONS_00036196Clytia hemisphaericatranscript
TCONS_00036197TCONS_00036197Clytia hemisphaericatranscript
TCONS_00036198TCONS_00036198Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00036197-proteinTCONS_00036197-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001424supercontigsc0001424:28493..32024 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.62 1.8 3.17 3.97 8.74 9.69 12.12 13.19 5.04 5.52 8.5 6.54 4.63 5.06 3.06 4.53 2.72 3.32 2.61 3.68 3.49 3.69 2 2.31 5.99 6.51 4.85 3.77 2.77 3.36