XLOC_021275 (gene) - C. hemisphaerica

Overview
NameXLOC_021275
Unique NameXLOC_021275
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001421:54617..58101+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021275 ID=XLOC_021275|Name=XLOC_021275|organism=Clytia hemisphaerica|type=gene|length=3485bp|location=Sequence derived from alignment at sc0001421:54617..58101+ (Clytia hemisphaerica)
gttccactttgacgattttcgaaaaatagaagcctttcaagtgttttgac
gcaaattcgattattgtgctactgcaggagcttcgaaaattaaaagtgac
gtcaaaaaatcgaatgtttagagcccgaaaacccgggctcaaaacattcg
aaaaagtcgcaaagtggaatagacgttatatgcgtaaaaaaacgcgggtg
acgtctagtatagatTATCgtgaatagagcttttcaaaataatttgcgaG
AAAATACTTAACttgattaactttcgcgaattcccTAGAATTTGCTAGAA
TGGcgaatgtttttttcttcaaaattttctagtTTAGTGATCTCTGTTAG
TAAGTTCCCGCTATAATATTTCTTAGTTTGAGCACTAGTTATActagaaa
aattataaaagaaaaattgaaaactcaTAAAATAATATTAACAACGCTCT
TGatgagaaataaagaaacaaCACTGTGGAGACAACCATTCTCAATTCAG
ACGTGAAATTtatttaacaaaacaattccaCGAAATTTCTTCAACAAATT
TGAGACAGAAATGCCGTTTTTTGAATTGGCTGAGACGGGAATTTGAACAC
TGCAAGAGGCATTTCCTTCGCGTTCTTAACTAACGTTTTAAAGCAAAATA
TAATTATCAAAGATCAAagtttaaatctctttgaaaatgccctttaaaag
aaatttagaaaagaCATATTTCAggaaaattgcttgaaaattatgaaaaa
agattaaagcgctgaaaataaaatataaatattttaattaaatCACCAAA
AACTAAAATGAATTATGATTAAATTGAATTTATctaaatagtgttttttt
tccatttcttaaTTGTACTAAGAGTATAACAACTCGACTCATGGCCTTGA
AATTAGCCAGATTTTAATCAGTTTTTGATCGTCGTTAGTAAGCACTTCAT
GTGTATGGTTCTCTTAACATAATGAAAAGGATAGTGAATTTTTGTTCCCT
AACATTGGGAAAATTAAAACGAACTAAACGTagtaattaagaaaaaaaag
gtaaatttaattgtataaaaaattaattttcataaattcaaaatattaaa
atcaaaataaagaaaaaaatatcaccTAGTGTATAAAAACAAAGCTCTGA
AGCCgatctctttttttctttcaatttttcggtCATTATTGCGGGATATT
TGGTAATATGCGCTTTTTACGTGGCTTCTCGCTCGGAGCCGCACGGGAAT
TCGGAACAAATGGGGCACCACCGAATGGATCATCCTTGGCGGAAAAAGGG
TCAGAAGCTCGGTTATTTTTACCAGCCATAGGTGCCATATTGAATGGATC
TCCATGACTACCACTAGACGGTTTACTAGTCTCTTCAATTctctttttat
gttttgaaacTTTAATGGGCGCCATTTCAAAGGGGTCGTTCGAGCTTTGA
TTGGCAATAGGCGGCTTTGTTTGGGCGTTAGTGGGCGGTGTTTGTTTGGC
AGCAGGTGGGTTTCTTGAAGCGATGANCTTTGTTTGGGCGTTAGTAGGCG
GTGTTTGTTTGGCAGCAGGTGGGTTTCTTGAAGTGATGAAATCATCAAAA
GGGTTAGCAGCCACAGGCAGTGATTGTTGAACATTCACAACCTGAGGATT
AGTCTCTTTTTTCTTTGGTTGGTCGTTGCGCGGCCTATGATGTTTCTCCT
TTTTAGCTTGACGTCGTTTAATTTTACCGTCAGCCGTAGTCTTGGAATGT
GAAGTGCGCGTTTGTTGCTTAACAGGCGGAGCGAATGGTGCAGCATCAAA
GATATCACGCTGTGTCTTAGGTGCAGTTGAAGCACTACTAGACCACGCCT
TTCCAACCACTTCAGCTGTTTGATGTAGCCTGCGTTCCTCAATATTCACA
ATCTCAGAGCCTGATTCCTGATGCGCCATTTCTGAATTACAATCTTGATA
CGCATGCGTTGTAGAACCTGTGACTTCATAATTTTCGCCATCACTAGATG
AATTCGAATGATCGCTACTACTGCAGGACGAGGTCCGCTGGTAAACGTAT
TTCCGCCCTTCTTCTGGCGGCGACATGGCGGGTGATAACAACGGAGAAGC
GTCATTCCGTGACACATCTAATGAAGTGCGTGCATTCTCCACCGGAGAGA
CGGTCTCCTCGTTCACTCCTAACGTATCCAGCATAACTCCCAAAGTATCC
AATTCTTTTTGTAACTGGTCGTATTGTTGATCCTCCTCATCAAGAGCTAA
TAATACCCCCGTCTCAATCTTTTTTTCCTGGTGAAATGGATTAGGGCCAT
CAGTCGAAACCAGGGGTTCATTCGTATCGATCACTAACGGTTTCGTTTTC
TCGCTGTTTCTTGCTTCAGAAGGGATAGGAGATAATCGAGGCGATGGCTG
TTTATTTTGACTCGATTGCCCGCTTATACCGAGCTTATCGACTGCACGAT
TGGCGGCTAGTTTTGTAAAGGTATCTGAACGCGATCTATTATGGGTTTTC
TTCTTTGCGTTGAACGGATTAATTGCCGTATCATCCGACGCACGACGTCC
GGCAAACGGATTCGATAGATCCGGCGTCGAATGACTAAAATCGTCATCGA
ACGCGTTAGGAGAGGAGCGGCCGCTCGATATTTGTTGCAGTTTATTACTC
GTTATTCCGTTACTCACAGACGGCGGTTCAACGCTATGACATAGCCGCGG
ATCGACGGGATCTTGGCGTGGATTAAAATCGTCGTccaacattttttgtt
tttggaccATGATCCTTTGCATTCGTATTTTAGCTTGTTCCTCTTCTTCC
TTCAATTTTTGTAGACGGTTATATTGTTCTTGTCTCTGTCTTATATATTC
CTCTTTCTGGTTTTGACGAGCCGCCATTTCCTTTTCTTGTTGCAGTGCTT
GTTGTTGCTGTAGTGCCTGTTGTTGCCTAGCAGCAGCCTCTTGTTGTCTA
GCAGCCTCCTGTTGCCTAGCAGCTTCTTGTTGCCTAGCAGCTTCTTGTTG
CCTAGCAGCTTCTTGTTGCCTGGCAGCTATTTCCATTTCCTGTTGTTTGC
GAGCCGCCATTTCCatttcttgttgttgttgttgcctTAGCAACATCTCT
TGTTGCATAATCTGTTGTTGCTGAAGTTGTTGATAATAGTTCatttgttg
ttgctgttgtagGTACTGTTGTTGCATGGCGTATTCTTGGGGCATCATTG
AATGGGGCACCATACCGCCCATAACGGGTGGCTGTTGTTGCTGCTGCATC
ATGTATTGTTGATATTGGGGCGCCATTTGTGTATTATGATTGTATTGAGG
TTCCGTAGGTGCATTCGACGTTTGTTTGAAAGCGGCAGCACTATTTTCCT
CTTGACCGTCAATCACCTGGTTGTTTCCTTTCGGACGTTGTCGTGGCGCT
AACGACGTCGTTACAGGCCTTTCTCGTGGTGCCACGGACGTCATGACAGG
GCCGGCAGGTGATTGGTTTGTTGAAGATGATTGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00036176TCONS_00036176Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001421supercontigsc0001421:54617..58101 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.75	0.56	0.83	1.51	0	0	0	0	1.5	0	0.13	1.03	0.51	0.05	0.85	1.68	2.1	1.43	0	0.6	1.73	1.35	3.77	2.01	0	0	2.13	2.41	4.49	1.99