XLOC_021130 (gene) - C. hemisphaerica

Overview
NameXLOC_021130
Unique NameXLOC_021130
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001396:13504..18705-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_021130 ID=XLOC_021130|Name=XLOC_021130|organism=Clytia hemisphaerica|type=gene|length=5202bp|location=Sequence derived from alignment at sc0001396:13504..18705- (Clytia hemisphaerica)
ATAGTAGAAACTCTAATGGTCATCAAGTTGAAGGGAGCATTGGAACTTCA GTTCTTTTGAAGTTTGAAAGCATTAAAGAGATTAAACAATATATAAGGTC AGAGTATAGTAATACCAATCTTTTTAACATAATTTATCTAAAAACTGATT TTCACAATGAGAAAGATATAAAAAGTACAATTTTGACAAAAGTCTCACGC AGACAATTAAATGCTTCTGTTAAAAGGTATCGGGAAAAAAGGAAAGGTAC TACAAAGCATGAACAAGAAAAGAAAAACAAAAGACAACGTCGAGAATCGA ATAAAGGGTCAGAAAAACATGAAAATGAAAAAGAATTAAAGCGCATGCGA AGAGAATTGTGTAAAGGGTCAGAAAAACATGAAAATGAAAAAGAAAGAAA GCGTAAAGATTACAAAGCTAACAAGAAACTTCATGGAGGAAAAAGGGTTA GGAACTTCAGACAGAAAAAACAAGAGGGCCCTTCCTACATCTGTGTAATG TGTAACCGCTGTATGTACAAAAAATCTGTATTTGGTTTTGATGAACAAAA GTACTCATTGATCAACTTTGAAGAAATAGAACATTTTAATCCTGTAACCT CGTTCGATGGTAATTTCCACGTATGCACAACCTGTCATAGAAGATTAACG AAGGGAGAAATCCCATGTCAGTCTGTTATTAACAAGCTTCAAATTTTTGA TCTCCCAGATAATCTAAATGATATACGAAAACTGGAAAGAATTTTAGTGG CTCAAAGAATTTTATTTTCTAAAGTTTTGATAATGCGTAAAGGAGAATTC CCTAAATTGCAAGGTGCAATATGCAATGTTCCCATTGAAACACCAGGTGT ATGCAAAGTACTTCCTAGAGGAAGTGATAGTAGTGGGGTAATAAATGTTG AATTAAAAAGAAAGATATCCTACAAAAACCCTTTTATTTCACAGCAAGTA AGACGACAAAAAGTTTTTGAAACTTTGGACTTTTTAGTGAATAACCCTGG TAAATCAACTCGGGTTCAATTTCGGGTGTATCAGGTTCACCCGACCTCAC CTGAAATTGCTATTTTTGAAAGTCCGGTTCGTTTCCAGTAAATCGGGTTA ACCCGAATTCACGGGTTGTTCAGGTTGTTGTTTTTTCGAGTATTTCGGGT TTACCTTAAAAGTCGGGAAACCCAGGTTAGCGCGCGCCTGCGCACCGAGC ACTAACCTGAAGAACTCGGGTTATTGGACGATTTTGAGTGGTCCTTCGCG TCCGCAAAAATATTTTTTTCACGATCGAGAATTTTGAGCGCGCTTTTTTT CTTTCTGCGAGAGAGTTCAAGATGGAAGGTCACGTCACTTCGTACTTCTC ATTTACAATTCACTTTGACAACTGGATGAAGAAAATCGCCTTCAATTTTC CAAAGATAATGACTATGACTGGATGAAGAAAAAAAGGTATGCTTTTATCA TTCTTTATTTTCTTAATAAATTTGACAGGGCAGGGGAAGTTGGTTTGATT AATGGTTCTTCTGATCAATCTCTTTTCTCAGCCTCAGAGTGTTCTNTTGA CAGGGCAGGGGAAGTTGGTTTGATTCATGGTTCTTCTGATCAATCTCTTT TCTCAGCCTCAGAGTGTTCTTTGAACTTAAGTGCCAAAAATATATCTCAG TTATATTATTTATCTTTGCAAGTAAGTCTATAAAGTAATCCCAACAAATT GTTTCCTGGAAACTTTTAACCTTTATTAGAGCTAGAATCTGAGAGTTTTT GTTTGGGGTGTATCTCACTAGAGTACGACACCTTCTACTTCAACAACCAG TTAGTCACACTAGGAAATCTAGCTTTCAGAAAAAACAACATCAGTCATCT ACAGGATACATTTCAACAACAAGGATGAGAGTTGCCTGAATCAAGTTCGC AAGACAATATTAATTAAAACTTGAAAGTTTGAAACAAAATAAAACGTGCA GCAGCCAAATATCAACCAACCAAATTTTGTCATTCAATTCCCGAGACAGC GCTTCGATTTTTAAGGCCTTGTTTATACGCTAAAGTAAAAATAATTCCGA ACATGTAAATGGGTCATTGTTTGAGGTANNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGTTTTTGA AAATGTTAATTTCATTAAAAAGCGCCGGGTTATTTTTTCATGAATCTCTT TAGAAGTTTTGCGGTGCATTTTTTTGCTCGAGAGTCAAGTAAACGATATA GCGCTTTCGCAGCATTAATCTTTGATATGCATTTTGGCGGGACGCTAGTG TGACTAACTGACAACAACAGTCGGAATCCAGCGTGGAAGTTTGTCTACTA TGACTGCTTTTTTGTCCGAACACAGTTGCATGATTTGTCATATTTTGTCT GAAGGCCAACCAAAATGGTGCATCTCAGAAATCAACAATTCTTCAATGAG GAGTCCCTTCGAATTTTTTTTTACAATCACCTAAACTTTTACCAATTGGT TTACCAATTTTACCAACCGGCAACAAATAATATTCTCAACTTCAGTTGAG CTAGAATCTGAGAATGTCTGTCAGTATGTCCGTGCAGTCTGTCACGGCTA AACTTTGTTTGGGGCAGCGGTCAGGCTGGAGTCTTCAAAAATGGTCGGAT TCGGCTGAAATTTTGCACACTTGTTCCTTGGGTGAATATTTGGGAGCACT TTTTTCATTTTTTCAAAATATTGAGTCTTAGGGGTGTGGCCACGTGTTTT AGTCTCAAAACAAGGCTAAAAACTTTGGGACAGGCTTGAGACTTCAAAAA TATTCCGATTCAGCTGAAATTTTGCACACTTGTTCCTTGGGTGATTATCT GGGGGAATTTTTTTGCTTTTTTTCGAAATGTTGACTCTTGGGGGTGTGGT AATGAGTTTTAGCCTCAAAACGAGGCTTAAACTTTGGGGCAGGCTTGAGA CTTCAAAAATATTCCGATTCAGATGAAATTTTGCACACTTGTTCCTTGGG TGAATATCTGGGAATGTTTTTTTCATTTTTTCAAAATTTTGATTCTTAGG GGTGTGGTCATGAATTTTGGCCTCAAAACGAGGCTAAAAACTCTGGGACA GCTTGGAGACTTCAAAAATATTCTGATTCAGCTGAAATTTTGCACACTTG TTCCTTGGGTGAATATCTAGGGTATTTTTCATTTTTTAAAATTTTGATTC AATAGGGGCGTGGTCATGAATTTTACCCTCAAAACAAGGCTGAAAACTTT AAGGCAAGCTCGAGACTTCAAAAATGGTTAGATTTTAGCTGAGTAACAGC AAAATTCTTTGAAACTTCTCCGTTTCCATTTTTTTACTTTGGCACAATAA AAAAATCTTTCGTGAGATTCGTAAAGTGCACTATGCAATGCTTCAATTGC AATTATACCAATTTTGTCTTTCAAATAACTTTTTTTATTGCACTCATTAG ACAGGTAACATTTTTTTTGGGCCGGCCTAATAACTAGATAATTTCCTTAC TTACTATGCTTTAGAAACGTCTGAAATTAGGTTGTGGTGTGTCATTCAGG TTAGATAATTTTTTTTACTTATAAATGTTCATAAGGGAATAACTGATAGT TTTTGGATGGGTGTAGCTCAAGAAAGAGAATCCAATAAAACATGCATACC CTGCTTCCCTCACTCAGGAAAGAACAATATAAAATGAAAAATATTTTTTT ATATTCATTCTTTTTTGACAGGTTCAACCCCAACAAGAGCTAAAATGCAC AAAGAATTCAAAATTGACAATTCACTCAGATTACACCGCAAGTCAAGTAA GTACCGAATGTCTGTTTTACTATTCAGATGTTGAAAGATGCCTGTTAAAC AGATGGCTGAACTGTGAAAATCACAAATAGGTTTTTAGTCATTCTGAGCC TCATGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAAACTTGTAGCTCAGTA CATTGAAGACTGTGAACAAGAATTTTTAGCCTTCCGTAAATTCTTAAAAA AGTCATTGCTTGAGATTTAAATGGAGTTTGTGGTAACAATTCAGTAATGA GAAATTCTAATATTTTTTTAGACATGGCTCTTCCAACCATAGTACCAACT GAATCAAAATTCGAAAGCTGATGAAAATTCTTCCCTATTTAACAAGTAAG TGTTATTTTTCAATGCGAAGATATTTGGGCGGATGAACAGGTCAACTATA TCATGATATATTCCAGTATACTATTTTTTAGGGAAGCCATTTCAAGTTCT GAGGGTTTGAAATTTTTGTTGAAGGACTCCCTAGGGCACTCAGGCAAACA AGGCTCGAAATAACAATTTCAAGTAGGTCGGACAAAATGTCCGATCAGGG TTGCTTTAGCTTGAAAATTATGATTTTCGGGTCAGACATGTAGCTATTTG GGTCGGACAATGTCCGATGTCCGACCGTTATTTCGAGCCCTGGCAAGATG GGGATGTGTCGCTGACCAGAGTCGCTTTTATAAGTAAGGAAATACTTGGG ATATTTTAAAATTCACTAAATTGACACGCCAGTGACAGTACCCCTCCCCT GGGAAATTCAGACATTAAATGTATACAATAATCGACAACGCTTCAAAACC TTACTGAATTTCTATGACATGATTATTTATCATTAATTTTTAAGGTGAAG AAAGTCAATGGAGTTTCGTGACAGCGACAAATTCGGTTAACTCAACTCAA ATTTGCGATGTTGTTTTCACATTTCTTTTGCAGTATGAATTTTCAGTCTC AAACACGTTCCCCGTGTCTATATTAGATGGTGACAGCTTCTTGTATAATG TGTTCCAAACAGTTGTTATTCCTGGTTAGTCATGTCAAATGAGTGCAACT GTAATCTGCTTTTGAACTGGAACCTCTTATACATATCAAAAATCGATTAA GGAACAATCATGTTAAAGTAATTCTTTTATTCTATGAAATGTGTTAAAGT AG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035972TCONS_00035972Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035972-proteinTCONS_00035972-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001396supercontigsc0001396:13504..18705 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.53 1.51 1.46 1.26 8.06 6.64 3.17 3.81 2.34 2.96 2.16 2.21 2.02 2.32 2.02 2.19 2.16 1.9 1.82 2.29 3.71 3.22 1.26 2.13 2.12 2.53 6.22 3.77 4.13 3.57