XLOC_021074 (gene) - C. hemisphaerica

Overview


Name	XLOC_021074
Unique Name	XLOC_021074
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0001385:52126..58047+

gene from alignment at sc0001385:52126..58047+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_021074 ID=XLOC_021074|Name=XLOC_021074|organism=Clytia hemisphaerica|type=gene|length=5922bp|location=Sequence derived from alignment at sc0001385:52126..58047+ (Clytia hemisphaerica)
CAGGTTTCAAAGTCTGGAAAGAAGCTTCGTGGTCGTGGAATTATGGTAAC
ATATCTTCCCTTTGTCTTTCGACAAAGTCTGCTCATCCTAAAAAGCTAAT
TCTAATttagtaaaacttttttttaccaattttgaCAAAGCATATGTATT
CAAAGATCACTGGAAATCATTAGGTAAGTCTAAACGATCTTCAAACATTC
TATTCTTAGAGATATCGAACTCCAACGCCAGAAAGGGAAGAAGAACCAGA
AAAAGAAGAAGGTCGGAGATTCCATAACAGCGTAAACCGTTCGCGTCGCT
CTCGTTCAAGGGACCGAACAAGACGTCGCTCACCGCGCGGTGCAAGATAT
TCAAGATCTCCCataagaagaagaaaatattcaatttcacCTATTCGTAA
ACCCTCAACCTCCACTGTGAAAACGACAGATAAAGCTGAACCTTGCGAGG
GAAAAGTTGTAAAAGTCATGAAGGAAAAGAAGGACGACAAAACTGATGTG
CCCAAAGAAGACGGACAACCTGTAAAATCTCAAGATGAGAAAGTATCACC
TTCCGCTAAAATAAAGTCTTCTCGTAGCAAGTCGCGCGATCGAAGTAGGC
GATCTCATTCCCGCGAAAGAAAAAGATCACGATCGCGTGATCGTAGAAGA
AGATCACGGTCAAGGTCGAGAGGGCGTTATCGAAGATCTGGGTCACGCTC
TCGCTGTCACAGGAGAAGATCGCGGTCGCGAGACAGGTACCGTCGTAGTC
GAAGTCGATCGAAGCGTCGCTCACCAAGGCGCTCATCACGAGACCGTGCA
GGAAAATTCGAACGCCATCGAGATAAGAGTAGTTCAGACGAATCGATCGA
AAGGAAAACGAACGAATCGAAAGTGGCCGACCAAAAGCCATCTTACAAAG
AGAGGATCAACATGctattggaaaagaaaaatgcagAAGCACGTTTGGCC
GAAGAACAAGGCACTATTGCTTCAAAAGAACAAGAAGCATCTGAGTCCAA
TCGTGTTGCTTACTCACCACGTGAAAACGAGGCAGATGAAAACTTTGCAA
CAGGGATATTAGGCCAACCAGAACTGTACGACGATCTGATACCGAAAGAC
AGCTGTGCCAATGTCAAAGAAAGTGTTCAAGAGGAAGAGGAAGTAGATTT
TTATGCAGAGTTGGACAAGCCCTTCGTCGATGGTCAACANACAGCTGTGC
CAATGTCAAAGAAAGTGTTCAAGAGGAAGAGGAAGTAGATTTTTATGCAG
AGTTGGACAAGCCCTTCGTCGATGGTCAACAGAACAAACCATCGGAAAAA
GAAAGATCACTTCTAGTGGTGGAAGAAGAGAAATCCGCCTATGCAGAGGC
GGCTGCTGAAGAGGCGGCTGAACAACGTATCAAACTTCTGCAACAAGAAA
TTGATGACCACAAACGCGCCAAGTTGGACACCGCTCACATCCATTCTGAA
AACACATCTAGAAAAATTCGGAAGAAAAAGTCCAGTAGAGTGGATAATGA
GATGGATAGCGAAGACGAGGCTGCTCATAACAGGAAAGCCTCtaggaaga
agaaaaataagagACGCAAACGCCAGCTTTCCGAACAGTTAGTACTGAGT
GATGAAATGAGTGGTTCCGAGGATGGGTCGCAATCGGTTGATAGTTTGAC
AGAAGCCGACCGAGATGGAAAGTCtcataaaaagaagaaatttctgACTG
CAACAAATGGCCgtaagaaaaagaaatcacGCAAAGACCGACCACTCTCT
GACAGTGATGATGCTGGTGCCCACAGTGAACAAGATGAGCTGCCTTTGCC
GCCGAGCAAAAACCGTAAGAAACATCGCAAGGAAGCTCATTCCGATCAAT
GCCATAGCGAAAGTCAGTCGGACGAAGCTcctgtcaaaaagaaaaaatcg
aaaagcaaaaagcgcgggaaaatatGAATCTCTAAACAAAGGTCGGTGTA
AATATTGGAGTCTTCTTCCTTCCATAGAAGAAAGTTACGTACCATTTTTC
ATTCAACAGGGAGCTTTCCAAGTGTTGGACTTTTTCACCGTAATATTTTG
TTGATAATAAAGCAACATTTCTTAtctagaatttttttaatttttaaaac
atttttttgaaacaagTTTTAGGTTTTATATTGTGCTCTCTTGTGCTCTT
TGTGTGCCTTTTGATTTCGATAACGATTTCGAGATCTTTTTTTCGCTTTA
GATCTGTTTAGATCTCTAATATTACACTTATTNNNNNNNNNNNNNNNNNN
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NNNNGACTTTTCGCCCAAAGGAAAGTCTACCATGTTTGTTATGGTTTTTC
TGTTTTCCCACGtgacttttgttttgattttgtatgttttgttttgactt
gaaaGCGCGACAATGTTTACATCACAACTCCCgcaatgtccctttaaaat
ctagaaaattttccaagcttggcccgtaaaacaacaaattaaatttgact
CGCCTTAGAACAGAGAAACGCCACTAAACTGTAATTTAAACCAGTGATAT
CTATTATATTAAAGAAGCGTACTGCCAAGGTCGATGAAAACTTCAAATAC
TAGCTAGTTATTGCTTTTACTTGACAAATGGACTCAGATTAAACAAAAAA
CATCCTGCCGGTCTcaaatttcagccattttgacaTAATGGTATGCAACT
GTTTCCGATCAATCAGGATCAATCAGTTTTGCAACTCATCTTCCCATAGC
ATAGCAATACCTTTCACTGTACTTGTCATTCTTGAAACGAACAGGAGGCA
TTTTTAGTTCCCTCGGTATGCTCAGAAGATTAACAATGAACCAAACAACC
AATCAGTTTTGAAActctttgaaaatttatcatgTTTCTTTCCTTTCTTA
CAACCTTAAAACTAAGGAAATACTATGGACTGTAACTTCTGgaccggtta
gtgtaaaacacaggtcacaggtcacaacaaagtgcagaccggaaaaaaag
ataataagattataacatatacataacataacatattaattatacaaaat
gtgatgttgatagtgtgaatggatatataaaaacggcaccaatcagaagc
ttgttaggtccctaagagagtggatgaaactaattaatcattcgattgtt
attttaatgacttatgacaatttttgacaaaaatattgacagaatcacaa
aatatcatgtcttacaagagaaaaacaccaaaaatatttagcataccgaa
tgtgatgataacaatatggctggatataaaattacaccaatcagaagctc
gtgagttctctgagcaggtagttttagagcgatgtgttttattatatgta
accatcatataacattacaaacattacaatatgtaatatacctgttatac
gtataatattgtttcaaatattttctggtctgcgttctacacggcgcaaa
ctgcgaaagatcgataaaagcacatggttaaattttgatgtttggaatgg
ttttatatggatgaaattgcttgagaattatgtttttgataattctttgt
gttttccaaacattttcctctgcaatgacattgattagagtcaacctgtc
atcactgacctgtgacctgtgacctgtgttttacactaaccgcttCTGGA
CTATCTAAAATTTTATGGGATTATTTTATTAAcactatttgaaaaatctt
caatatgttttagtttttaattttttataggTTGCTTAAATGATATAAAT
ATGATGAAGAAATTTGATCAAG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00035885	TCONS_00035885	Clytia hemisphaerica	transcript
TCONS_00035886	TCONS_00035886	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00035886-protein	TCONS_00035886-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0001385	supercontig	sc0001385:52126..58047 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.17	8.97	6.24	6.15	68.92	56.59	37.79	40.9	25.15	32.4	27.3	25.22	36.63	45.48	31.66	39.59	31.17	34.85	16.29	14.74	23.78	27.47	26.24	28.19	31.9	33.31	16.16	15.5	23.27	26.49

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XLOC_021074 (gene) - C. hemisphaerica