XLOC_020976 (gene) - C. hemisphaerica

Overview
NameXLOC_020976
Unique NameXLOC_020976
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001360:47493..56778+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020976 ID=XLOC_020976|Name=XLOC_020976|organism=Clytia hemisphaerica|type=gene|length=9286bp|location=Sequence derived from alignment at sc0001360:47493..56778+ (Clytia hemisphaerica)
CATACAAGACCATCTTGAACAAGCatacaaaaagaaaacattgactGGTG GACAAAATACATCCACTACAGTGAACGGCGCTGTACAGAAGAAACAATGG TTAGGTACATCTCCAGATATGATGGGTGGTAACCAAGGGATGATGGTGGT TCCTATGCAACAAGCACGTGAGTAGATTTCAGTCCTTTTTCCCAAATAAC ACACCCCCGGAGTATTACCCTTGCTGACTGACGGGGTCGTGCGGCGCTGG GGTTAGAAAGacggaccctacgtgggactcattttttggaatattttgcc aaaatttcagAAGAAATGAATTCTCCCTGAATGagactgaaatttcaaaa ttttctcaaaatttcccACTTTCCACCAAAATTTCCCTGataaaggcacc ctacgaggagATGATTTcctatttttgtgtttttgtgacCCTACCGGGAC TCATTGAGATGAAAAATGATACCTTGACCAGCCGCATATACCCTTTTTTG CCCAGTTACCCCCGGGAAATCGCAGATTCGTGTAGAATAAGTACAGTGTT ATCAACAGCTATCAACGATCAATTCTTACTCAGTGCTGTGACTCTTTTAa gtctgaaaatgttcttagcatgttcttattcttaccattttgtgggtatc tttgtccattttcttaaaaaatcaggtgttttagagtctgtaaagcgtta agatgttcttaacattgttctattaatattttggccatcaaagccttatt ttcttataaggtttgttcttaaaaaaacgtgtaactatATTTTAAGCTGA ACTTGTAACAGAGTGCGAGAGAGGGATATTTGAATGGATCaaagaacatt ttcaatttattttctaGCAATGGATATGGGTATGATGAATGGTGGGATGA TGCCGATGAATAATATGATGATGGATAATACAGTTGCCATGCAAGCTAAC AGTAAGATATTCTTAAATACGACAAACTCCATTTTTGCTGTAAATATTAA ATTTCTTTGCATTGATATTTGAGATAAAAGTCTCTTCGATTGGAATGCAG GAAGGCAGACTTTTTCCAATTCATGGCACATTCTATCTCATTTAGATCCG CCTTTATTTCCTCCACTTTTATGGTTGTTCCGCTGGGCTTGCGGAATGCT CGaaagttttcctaaaaaatcTCCAATGGAACGCAGGCCTGGTGGTAGCG TGGAGACTCGGGAAACTTCGGCCTCCCTACTTTTTAAGCAAGCGAGATTT TTGTTCTCAAATTCCTAGTGAATTTTATCTTATTTCGAGCCTTCGGCCTT CCCTTGACGgttgttccaccgggcctgaaacggagaagaaataaaatttt ctttttgctttacTCGTTGAATATGGAAGGCAATAGAATCTTAAACGTAA AATCTCAGTCTTGAAAAGCGATGTACCCATCCATTCTGGGATCCATTCCA ATCGAAGTACCTTTTATCTCAAATATCAATGCAAAGAAATTATCAAGTCA CAACCAAGAACCTCTGCCTCAAAGATAAAAAAGTGCCTGAAAGGTTTTGA TTATATTCTTCTGATTTCCGAACCGAGTTAAGAGTTAATAtaagtttaaa gatttttgttttcaaaagttattcaaaGAATTTGAACCCAATCCAACTGG ctaaaacgttgtttcaacgttaatctaacgttatatggacgttgtgaaca ttagataaacgttgaagaAATAtcgtgtgtcagctgggaaagTATTTCTT CATTCGTCACAGATTTAGGTCAAATGCAACAACCAATGATGGTGGCAAAT GCTCCACCACAGCAAATGAATCACCATACAGAAGCTGAATTAACCAAAGA AGACTCAGTGGACGAAGCTGTCAATCCTCCAGGTAAAACACCAACACTGG AAGCGACCGTAGcttgaaggtagagcatccagcaaCGGTGCGCAAAGTTG TGGGTCCAAACCCTGGCCGAGTCATACCCAAAGACTTCttaaaaatggta cttgatacctctcCGTATTAATGCTCAGTAATTAAGGGAAGGATCAAgag taagtggagaaatccagggagaaagagtgacCGCCCTCCCCatcttcggg tagacagctatcgaaagagtagccttcgggtcgcctccgactgcggtcgc aggcTTACTCAGTGGAAGTGCCTTCGTATAACGACCAAAAAATAAGGAGA ATCCTAAACCTTATAGGGgctgttttgactttttgttgtttttgtaacTC TAAAAGAGACTTTGGAAGATCAAAAAACGCTTACCATTTGCAGATATCCA TATTTTTATCTAAGTACCCCAATCCGGGATCTAATAATATCTGTAAGCAT GTTAATATAAATAACTTCAGATATTTGACAGATATTCtgataatattttg atattattctGATAATATTCGATCCACGTAAAGTCGAAGccaattctttt ttcatgcCTTCTTATGCTTTTACTTTCTTTACAAGGGGTAAAACACTGTG AGAAAGGACAGACCCGTGAGACCCGCCCCTCCAAATGGAAAGAgcggcca aaatatcgttccagttgaaaattatactccaaatTTTGTCcttgctgaaa ataatcaaatataaaaatccTCACTCTAAATTATTGTATTATTCTTTCCC ATTCCCACAAGCTTTCTGACGTGAAAGCAATGTAATTCAAATCCACAGCC ATATAAAACACGGGAGTCCAGTCAGCTCAGTCcgaatcctaccgggtctg tgacccaggggggggggggcctgcccttgccgaccgaccgacggggatgc tccgctgaggttcgaaaaatggacccaaCTCGAGGCTCGTTTTGCCGAAA TTTACGAAAAAAGtaaccctgaatgggactgaaattccaagattttctca aattgtctactttgcccccaaattttcggGAAAGCACCCTACGAGAGACA TTTTCGtgttttgcgaccctacctgggactcgtggaggttaaagaCCCGa gggtctgtgagaatgggGTGTCTAAAAGGTGTTTTCaactattttaactt ttttttattttttgttcacaaCAGTCAATGTCAGTTTGTCAATCATGGAT CAAATTATGTCCGTCAACATTGACCCAGGTGAGCATTTTATATTGATATC AActcatttttactttttatcaataaattctATAAACTGTCAATATTAGA TTTCACTCAGATAGACACTTTATCAGGTGTGCGGTAGGCAAGGAAATTCA TGTAAGATATATTTTGAGCAATAGAATGTAACATCTATAAGCTGGTAGAT TCCATGCTTCTCGAATCAAATGATTTCCCTGTTTAAAGACTGGCTGATAA ACATTTCATGTTGcagataaaaaaaatcttcctttttttctcttaGAGTT GGATTTCCCAGCCACATTATCTACAGGTAAGGCGCAATTACCATTTCAAT AAACTAAAGCTAGTTCTCATTAAGATATTTGCTTGAATTTTCTTTTCCCG AGTATAGCTTCTTTCTTCACAAGACACGGGACAATAGCGTAGTGAGTCGT TCGAAAATGGAGCAAACTTAGGAGGCAATTTTCCGAATATTAGTATGTCG GCACGCCCTAATATGGATAATAAAATTTGGAACAGTTACTTTGAACAAAG TGAGCTCTGATATTTTTCCTCATTCTTAAAGTCTAGAGAATTTAAGAAAG CAAAAGAGTGTTGAAattagaaattaaaattaaattccagaaaaaaatta tacatgggagggggggggtggaggatataacaattttcagtgatttacaa agtgacttttggcccccggacaacgggttttacccccggacaacaCAAAT taccccggacagagcaaatttatcCCCGCACAGAGcaaattttgatggtt ttttgctacccccggacaatatatcctccacccgggGTGTACGAACATTt gctggaagagcccaatcagAAGAGCTTTTTGTGCTCCCAATCAATGGCAA CTGGAGGAGTGTCACTACGCTGCTGGTACGTGATCTAAGAAATGTGACTT TATGAAATTCCCTTACAGAAAAGGAACATTCTGCTGGCCAttgcaatata tttttgaaCTTCGAAATTTATTTGCCAAATCTATTTATTTCATCAGATGA TGGTGATCTTGTGGAGCTCTTTGAAGGTGATATCATACGAAACAAAAAAT TGGAGGTAACATGTAACATAATTCATCGTAGTTTAATATAAGCTATTCAC TTTTCTAAATTAAGTTCAAAAGGCTTATTTATAAACTATCCTGGCGGGAT AATAAGATTCTTGCTTAAAAGATTTGACAGGTCCATTACTATGATAGGGG TTTACATTTTTTAATGCTTTGTACTATCTTTTTCGTCTTTCAGGTCGAAG TATCAGACATGAAAAAACCTTTAAACCAATTAAGGTTACGTGGCATAATA CAAAGTAGTCGTTGGCCTCATGCAATTGTACCTTATCGTTTCCATGGAAA CTTCAGTGAGAAAGGAAGTAAGTTAACCATCATCTCCGAGAAAATTCTGA TTACTCCGCGCTGgcacgtattcactctaaagCCCATGGCTCCTTAGAGA ATCTGCCAAGGTTCGCGGGTtactttgatctttttcatgcAGACTTAGGA TGAATATGAAGATTTTGAGCACagtgattggctaaagcaaatAAATTGCA CCATAGTAAACTGAAAATTATAAACCCAGATCCAGACTCAAGCTGTGAAA GTTAACTATGCATTGAAATCAATATGATGCTGTCTTCTTCTAAAGTagag tctccttaactcgaacaaattgtATAGTCGATTCAGTTAATaatacctta taaaccttactccataacgcGAAATTTCCTTAGCTTGAACAATTTTGTAT TCTCCGTCCGTGTTCCAATTATAAAGACTCAACTATCTGTATCTGTTTTA CTCTTAGAACAAGTGGTAGCATCAGCTATTAACATCATTGAATCAAAGAC ATGCGTTAATTTCAAACCGAAAAATGACAAAGATAAAAGCTTCATTGAAT TTGTGCATGGTGGGGGGTGAGATAACATCTTGATCAAATCTTCAACTTTA ACTTCGTTCAATATTTGACTTTTACGCATGCGCTACCTTCTGATATTAGA ATGCAAATCGTTTTAGGAAAACCAGTCAGTAAACCAGAAACataacaaaa ttaacaaaacagTTTAGAGCCAGGACttcctaacctgagatcagattgtg aatgttttctgcacaccacgctgaagctctaaagggatgtgtgaaaacat aacaatctgatgaatatgcaatctcgaaatcgtaaggaccgcattcgtct aaaaggactaggaacaacaacaaagttgcgtgattgtttttatgaatagg gcgccgtatcagttattgactttccggcgcacaacaagattcttgttgta gaattttcgcggatggactattttcctcagatgtataattttcaagcgcc ttcagaggtttaatgtgcgcgtaagaaaattacgaacagctgttatcagt tTAGGATATCCAGGCCAATGAAAGTTTTGAATACCAAGTAGGCATAGCAT ACCGCGACGAATCTAAAAAGAGTGACAAAACTGCACAAATGTATTCGTTT GAGCGTTTGCACGTTAGTTAATCAAAATACCAAAAGAAAGGTAATAACTC TCACGGTTTTCCGATCATTTCGAAATGCACtgtgggattggaactcgtac aaatttctagttgaaataattatgacgtGTGAGATGCGGTGCGCTCTTGG TttgatgttttattttcaactgagcATGATCCATTGTGTTTTTTTCAGGT GTGCTTCGAACGTCGGTCGACAAGGCGGTAAACAAAAAATCGTTCTTGGC ACCTCATGTTTAATTGTTGGAATAGCGCTCCATCAATTAATGCATTCACT CGGCTTCTTTCATGAAACATCACGAAGAGATAGAgataaatttgttcgaa ttgaTTATGATGAAATTAATAAACGTAGGTACATCAAACTGTTATAGCGT GTTATGAATGGACCTTTTCATAAAGtccgaacatcacttgccttgttttg aaattattgccatggtgattaactcccagctgattttattaaaactactt tctattcatagaaaaaatcattttatgtctcaagggacataatcaccatg gtaattgtttgaatacgaggcaagtggtgttcatgacgtaatttatgaaa aggtctataattGGTAGTTGGAGTCATTGAGTTTAAAATCCTGAAGGAGC TAGAAATGAAACTATTGGATTAGAAATGAATAATCAATATACTTCACATC TAAAACACGCGATCCGTATGGTTTCCACACGCTAGTTAGATTGATTCAAT CAGTCAATTTAAATAAGCCGAAAATCTTAAGGATCCTGTTTTTCTTGTTC GCCCTCGGTATCCTccaatacataaactcactattGACTTGGCAGCGAAG ATATTATGTGGTACAGAAGTCGATACAAGTTACGCTATGAGATTCCCAAG CGAAAGTTTCAGAGGAAGCCGGATTCTATTACTGTATACCTTGATATTTG GGCATCACTTGCAGGGTTATTGTCTAAAATTGAAGcaaaaaacaaacgaa aaacATAAAGAACCCAGAAAATCTAAAATGTCAGTACGAGCAATTTGGTN ccccgtctattcgggagacaagcaGAGTCATTTAGTTTAAAATCCTGAAG GAACTAGAGATGAAACtattggatgggaaatgaataAGCAATATATTTCC CATCTAAAATGGATCCACGCGGTTTCCAAACGCTAGCTAGTTTCATTAAA GCTAGCTAGCTAATTCAATCATTAATTCTAAATAAGCCAAAAATCTTAAG GATTCTGTTTTTCTTGTTCGTCCTCGATATCCTCCAAAACATAAACCCAC TATTGACTCGACAGCGAAGATATTAGTGGTACAGAATGTACTTGATACTC GTtaaggctggtctccacttgcgcgtgctgcaatcgcactttttgcttgg aaaaagattacgtcataaaaatgtagcacgccctcgaaaaaaaacttttt tcaaccgttaagTCAGGATtgcgccaatggaattgcttcatttttctttt gaccaatagcgtggtaGCTCTGATCGAAATAGTGCGATCGCAACGCGCGC AAGtagagaccggcctttacaCTATGAAATTCCCAAGAGAAAGTTTCAGA GGAAGCCGGACTCTATTACTGTATACCTTGCTATTCGGGCATAACTTGCA GGGTTAGTGTTTGAAattgaagcaaaaaaaaaacaacaaaaaaaacataa agaacCCAGAAAATCTAAAATGTCAGAACGAGCAATTTGGTCATCACTTG CAGGGTTAGCgtttaaaattgaagaaaacaaaacataaaaaacccGGTGA ATCTAAAATGTCGGAACGAGCAATAAAAGATCTTTCAATTGTTTCATAAG TGTAGATTAcgtatcaaaatattttatttcactttTAAGATATGTGGTAT AATTTTCAAAGATATCGGGATCCCGGCAGAGACGAATCTTATGATAAGTT TTCGATTATGCATTTTGGAAGGTGagatagtagagggcattttgtaaaat cgcatgactgttttgttagaagcacNGGTAAGATAGAGCTATGACAAAAA TTtgtatgttcttaattttttgagttttaaatcttaaaattttcttaact tctcttattttggccattgaacccttaggttcttataaaaacaaaacaca ccCCCTTTTCTCAGACTCACTGTGGGAGTccttcccattggaaaaattgg ccaaaatattgtttCCAGtcgaaaattatcctccaaattttgtccccact gaaaataatcatatAAAATAATCATCATtccaaaatattatgctattttt cctaaccccactgaattttctgacttgcaaagaaaagaaattaaatttac ggccataaaaaaacatgggaatatcaatccccatcgattttcaatccgtt atttttacccccactggctaaaagaattctaccgggtctgtgagaagggg gtgtaaaaaatgtgtattatcTCTATATTTCAGTTACGCATTCTCGTTAA ACGGGGAGCGCACAGTAATTTCCAAATCGAACGCTAAAGAAGAGCTCGGT CGACGTTTGGATATGAGCACTGGAGAtatccaaaaaattaataattaCTA TGATTGCAAGAAAGGAGATATCGGTATTATATCAAGCAAGGGCgtcaaaa ttaatttgaaggCGGCCAAGGGTGGAAATAAGGGCGCGAAGTCAAATAAT GATAACGCTGACGACGACGATGACGATGATAATAAGGAAAATAAGGATGG AGGTACTTAATAATTTTGCTGAACAAGAATCGTTCTTATCTTTGTCTTTT Gtcttattacacgttttttataagaacaaaattttgaagcgtttggatgt tcttaactttttgagtttaaagcctcaatgctcttattttcatcattttg ataGTGTTTTTACTCATTTTCCTAAAATATCGGGTCTTTTAGAGCCCCCA aacccttaaaatgttcttcaatTTTGTtcctaatattttggccatcgaag ccatatatagtttgttcttatgaaataacATGTAGTAGGAACAGGAGTTT TCTAAAAGTAATTTCTatgttttcaaatttgtttgCGTCGCCAATTTTTG TATGCGCATGCACTGTCCGGTAGAGGATCGTATTTTTCGGACAAGCGAGG TTTACGGTTGTAATTAGGAACCGCCACAGAGCCGGCCCACCAACGAATAT AAACCCTGCTTTAATAATACAAAATAATGGAAATCAGATTCCCACCACAG ACAtttaaaggaattatttaaattGGTGATTTAGGAATGTGAATTTCTCC TTGAACATTTAAAATTGGAGTGTATAAAGTAAACAACTTGAAATggtgaa atcttttttattttttttcagaactGAAGGACAAATATTCGTTTTGCTTC AAACTTGGTGAATTTTGTGACAATGAAAAATGGGTTAAGAAACATTGTTT GAAAACATGCTGCAAAGATCGATACACGTTTTGCAAAGATTGGACGAAGA AACAGTATTGCTTCAAGAGTGAAAATAGAAGTTGGATGAAAGCTAATTGT CCAAAGTCTTGTGAATATTGttagagaattttttaaatatgtaCTGTAAA CTTAATCAAATAAATATCTATAACTCTATAGGGTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035760TCONS_00035760Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035760-proteinTCONS_00035760-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001360supercontigsc0001360:47493..56778 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0 0 0 0.4 0.4 11.18 13.45 3.75 2.62 10.27 8.3 12.61 9.93 8.6 18.16 12.36 11.82 0 0.09 5.85 5.02 3.73 3.42 6.79 9.53 0.69 0.35 0 0.03