XLOC_020944 (gene) - C. hemisphaerica

Overview
NameXLOC_020944
Unique NameXLOC_020944
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001354:42726..49175-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020944 ID=XLOC_020944|Name=XLOC_020944|organism=Clytia hemisphaerica|type=gene|length=6450bp|location=Sequence derived from alignment at sc0001354:42726..49175- (Clytia hemisphaerica)
GTGTTTCTAAAGCCCGTTTTTAGATTATATTTCAAAATAGTTCTATAATA GTTGTATGTAGTGGTAGTAAGCCTTTGGATTGAGTATTGAATTTTTTATC AAAATCTATGTCAATTGTTAAGATGTCTTACAGGACTAGGAAGTGTGTGA ATTAAGCTACGAATTATTTAATGGCTAGTAGTAGTAAAGTTCATCTGACA AGAAGCCTTTTGAAAAATCTTATACGCGTTTTTTTTAAACAAGAACAAAC CATACAATAAGAACAATAAGAACATAAAGCTTCGATGGCCAAAATGTTAA CAGGTTAAGAACATTTAAAGGATCTGCGGACTTAAAACACAGGAATAATG GACTAAAATACTCACAAAATGGTAAAATTAAGTACATGTTAAGAACAGTT TTAGATGGTGACATTAAGAGCATTTTGAGAATATTTTTTGGCTTGAAACT CAAAAAGTTAAGAACATCAGCAGACTTCAAAATTTTTGGATGTTCTTATA AGAAAACGTGTANTATTGAAATATTTTATTATCAAAAAAAGCTTAGTAGA CTATATTGTTTTATATATTATGAAATGTATTTATCATTTTTCTGTTATTG TCCCACTTTTTGAAGGGCCTCTTCCAATCTCATTAGTATATTTGCTGTTG CTACAACGACCTCACTCATGAAATAGATTTGGTTTTAACATTCTCAGATT ACTCTTTTCTAAAAAGTACAGTTTGAAAAATAAATGTTTAACTTGGTGTG TTGTTTTTATGAAGTGTTTCTAAAGCCCGTTTTTAGATTATATTTCAAAA TAGTTCTATTATAGTTAGTTGTATCTTGTCACAGTAAAACCAATTTTCTC CGTCTATGCGAGAGTGTATAGAATATAACGTAGTCAGAAATAACACATCA TCTTTCTAATGAATATTTCGGCCAACTGGCCTTTTTCAACATAAAAGTTA GTTGTATGTACATAGTGGTTATACTGTAAAGCTTTGGATTGAGCATTGAA TTTTTTATCAAAATCTATGTCAATTGTTAAGACGTCTTATATACAATGGG ACTAGGCAATATATTGAATTGAGCTACGAATTATTTAATGGCTCATAAAG TTCATCTGACAGGAATGAGCCTTTTGAAAAATCTTATACACGTTTTTTTT ATACAAGAACAAACCATACAATAAGGACAATAAGAACATAAGGCTTCGAT GGCCAAAATGTTAAGAACAAGTTAAGAACATTTAAAGGCTCTGCGGACTT AAAACACAGGAATAATGGACTAAAATACTCACAAAATGGTAAAATTAAGA ACATGTCAAGAACAGTTTTAGATGGTGACATTAAGAGTATTTTGAGAATA TTTTTTGGCTTGAAACTCAAAAAGTTAAGAACATCAGCAGACTTCAAAAT TTTTGGATGTTCTTATAAGAAAACGTGTATCTTTATCTTATTTATTTATT GGATTATTATTTTTGCCAGGATATTTTTAGAATATATTTTTGTATATTGG GAAGATTTCCAGCTCGCTTTTGGAAATTAAAAGATATTTACAGGTGCTAA TTTATTTCATTTTTACAAAATCATACTACCGGGTGCACCAAAAAAAAGTA TACAGGTTTGTCGAGATATTGCGAGCTTCAGGATTTTAAATTTTTTGTTC ATTCTTTTTTTATCGAATAGAGGATATGCTCTAAATTGAATTTTGAGCTA TCAAACATTAGGTTTGAAAAAATAGTTCGAAAATTATTTCAAAAAAACTN TCGAATAGAGGATATGCTCTAAATTGAATTTTGAGCTATCAAACATTAGG TTTGAAAAAATAGTTCGAAAATTATTTCAAAAAAACTGACTTTTTTTTAA GTCAAAATTTCAAAAAATCATCAAAAACAGCGAACAAACTTTCTCTTGAC ACTTACCTTCTTTACACATAAAAATACCAAAAAATGCAACTCTGTTCATC AAAACTCGTTACAGAAATTTAAACACCCCTGTCTCAGTGCCCCGGTGGCA TGATTTCAGTACATGATTTTTTTCAGTACATGGTTTCAGTACATGATTTT TTCCTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACTACCGGGTGCACC AAAAAAAAGTATACAGGTTTGTCGAGATATTGCGAGCTTCAGGATTTTAA ATTTTTTGTTCATTCTTTTTTTACCGAATAGAGGATATGCTCTAAATTGA ATTTTGAGCTATCATACATTAGGTTTGAAAAAATAGTTCGAAAATTATTT CAAAAAAACTGACTTTTTTTTAAGTCAAAATTTCAAAAGTTCATCAAAAC TCGTTACAGAAATTTAAAAATATAGCAGAACAAGCTATTCCCATGTGGGA TAAAAAGGTTTTGGAAATCTCCAAGAGAGGTTTTGATGTTATGTGTGTGA TATGTGAGAAAACTTTTGAAAAAATATATCACCATTCCTCAACTAGTTGC TCAAAGAACTTGGGTCTGCATTGAGTTTGCTCGTGTTGTAAATATCTCAA ATATCTATGACGTACAAATAAGATGGAGAAACTGTTGGCAAAATATAAAT CAAGAAAAAAAAATTTAAAAAACCCAATAAAATTGTGTTCTTGTCATTTT GTCTTATTTATAGCGTGATTGCTGTTTTTAATAATATTTTGAAATGTCGA CTCAAATTTAATGTACGATAGCTCAAAATTCAAGTTAGAGCATCCTCTAT ACGATAAAAAAAGAATGAACAAAAAATTTAACCCTGAAGCTCACTATATC TTGACAAGCCCAATAAAGATTTTATCTGTATACTTTTTTATGGTGCACCC GGTATATTTTATGCAACTATGAAATATATGTTATATACAATGATCGAGAA ATAATGGATATAATAAAATGGATTTTAAATTTATAAAGAAATTTGTATAT TTTTCGAGCCCGTCCAATTCAAAATTATAATTATTATAATGATCAACATT AAACAAATTATAAACTGTATGTGAAGTATAATTGGATGATTAAGCGTTAA TTAAAAAGGTGTAGTCATGTGTGTTTTCATGTATAAATATTGATGAATAA GTGACAAAAAAAAAACGTTTGTGCTTTAGTGTAGTAGACATATTTTTATA AGAACACAATGCTTCGATGCGCAAAATGTTAAGAACTATAGTTAAAAACA TTTCAAAGCTTCGCAGATTCTAAAACGCCTAATTCTTTAGTAACATGGAC AAAAATACTTTCAAAAAGAGGAAAATAAGAACACGTGAAAAATATTTTTA GGCTTAAAAATAAAAAGTTAAGTCCTATAAAAAACGTGCAACTGGCCAAT TATACATGTCTAGTTCTAACAATTCCTTTTCGAAAACATTGATGTGAAAT GAAAATAAGAATCAAAACTTTCATATTTTGTCCTTTTTTCAGGAGATGTT ATTCTAGCAATAAATAGATGTCAGATTATTTATTACACGAGCTTGCAGGT CTAGGTGACTGGAAACAAATCGAAGTATTATTTCGAATCAATGCAGTAAA AGATGTAAATTTACAAGATGATGAATTTGAAGGCCAAACTCCATTACATT GGGCAGTCAGAAAAGGTATGGATAAAATATTTTTGCAGAGTTCAGATCCA ATTTTTGCAGATCCAATCTCCAAGGCGATACTCCTGGTTCTACTAATTTT GGGAAGCTAGTGTGCGATATTGAAGGCTCCTTTTTCGAAAACTATTCACT CTAAGGTAGCAGATGGCGCTTTTTCTTCCTGAATTACTATTTTAGCCAAT TTCTGCCCAAATCATTCCTTTATTTTAGCAAGAAAGTGTATCCCATGTTA CTAATTAATTTGCAGAATAATATAGCTGAGAGATTAGAAACTCATTCCAG GGATATGTTATAGCGGAGCTGGATGAAGGACGAGAATTCCTTAGCGGATT GCTCCTTTGTCTTTTCTATTGTAAACTGTTCATAATAGAAATCCATNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAAGTA TTCATGCAGTACGTTTGCATATATTTTGCTATGATGTTCCCGCTTTTCAT CAAAATAATATTTGCAAAAGATACCCCAAAAGCTTCTTTGTAAATGAAGT CTAATTTTATCAGCGTGTGTTATAAATTTGAAGCTTTCACGATTTTTTCT TCAAAAATTTCGGATGTAAATATTTTGACAAATATTGTTTCAATTGACTT GAAATTTTTTACCATACACGTTTTTTTTTATATAAGAACAAACTATATAA GAACATAAGGCTTCGAGCCCAAAATTTTAAGAACATTCTAAGAACATACT AAGGCTTTGGAGACTTAAAAACATGCAATTTCTTAAGAAATTACATCAAA ATGCTCAAAAAATGCTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNATTAAAAAAGTTTAATTTCATATCAAATT TTAATGTCAGGGACAGAGATAGAACAAGGCTTTTTCAAATGTGCGTTATC CAGCTCCGCTATAACATATCCCTGCTCATTCTAGTAGAAACAAAAATTAT GTTTAAACTTTTTAGGAAAATTAAAGTGTTGTAAACTTTTATTGGAACAT CATGCAGATGTTAGTATCAAGATGCATCAAGGATGGACAGTGACTCATTG TGCGGCGGAAAACGGTCATTTGGAGATCTTGCGGTTATTATATGATCATT TTGCACCGATGTTTGACAGAGATGACTTCAATGCTACACCAAAAGATATA GCAAGAGTTTATGGACATAAAGACTGCTACCAATTTCTAGATGAGTAAGT TATCTTTTTGTCTAATCTAAGTTCTCCTTTTCTCCTATTGAAGAGAAATA ATAAGTTTATGGGCAGTACATTGCAGGAAATGCTTTAAAATGTAGACGTA CAAATAAAAACTCTAAATTCCATTCGCTTTGAGTGTTATTCTTATTATTC TGCTCCATGTTCCAAAAGCTTTAAAATACCAAAAGTGAAATATCTAGTAT TAAAGTAGAGTTAATTTTTTCCTCTGCATTTCTGCATTTTCCCCAAGATT ACAGCTGAATTATCTTTTCAACTGCCTTTAAATTGTTACAATCGAATCAT TCGTACAAGAAAACGGCAAGTAAAACAAGCATTTAACCTCCTACAGACTA TTTCTGGAATAGCCCAATGTTGAAAAAAGGATTTTTTTATTGTTGGTCAA ACGTCCTCAATTTTTTAACAATGTATGTTGGTATGTTATCTGGATTCTTT TTAATTCTTCAGTGTTGAGAATGGACGTACAAAACGAAGAAGCATCGAAG AAAAGATAGAAGAAAAATCTCTCCCACTCATAATCTCTAATGAAATCACA AACGAAAGACCCAAAACAGCAAATCCTCCGTAAAAAACTGAAACTCACTA TAAAGAGAAGATGGAAAACAACTATCTTGAGACATGTGGACCTGATTAGG CTACATTAACAAAATTTTGAAACATCTCAATTTAATGGCCACGCAGTTGA ATCAGCCAAGTGGGAATGGGTGATAAGGATTGAAGTGAATCTCCTGTTTA GGATTTGGATTGAAAAAAGGTGGAGATGCTCTATAATCATTCGAAAATCC TGATGAAAAGTTATCCCATTGGGCAGAAAATGGATTTGAGCTGTAAAAGC TTAAAATGAAAAGACATCTAGGATTGGAAAATGGATACAACATCAAAATG GCGTGCGACGTTGAGTACAAAACAAAGTTTTCGATTTTAAAATAGCATCT CCAAAAGATGAAAACTGACAAGTCAATCTTCAAATAAAATAATTTGATTA CCTGTTCTGTAATTTTTTGTAATTTTCTGTACGTGGAAGTGTTTAATAAT TTAAAATTATCGGGAATTTTAAAGAAATAACTTGGATACCTTCTGGAACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035721TCONS_00035721Clytia hemisphaericatranscript
TCONS_00035720TCONS_00035720Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035721-proteinTCONS_00035721-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001354supercontigsc0001354:42726..49175 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.19 0.96 1.93 1.68 1.34 2.37 5.56 5.29 4.36 3.75 3.12 4.56 8.63 9.31 8.12 6.75 5.69 7.84 20.95 18.3 19.65 18.96 9.05 9.54 5.97 7.14 55.39 55.11 13.24 10.71