XLOC_020848 (gene) - C. hemisphaerica

Overview
NameXLOC_020848
Unique NameXLOC_020848
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001339:63064..66813+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020848 ID=XLOC_020848|Name=XLOC_020848|organism=Clytia hemisphaerica|type=gene|length=3750bp|location=Sequence derived from alignment at sc0001339:63064..66813+ (Clytia hemisphaerica)
ATAAGAACGAAACcgcgcaatctgattggctgaaatctgaaattctattt
ttcgCGCCGTCGCTATatgcaaaatttttcattttactttttgGAGGCGG
CAGAAAGAAGCAACAAGAACTGCAAGAAGTTAGTATTTTCCTATCTTTTC
TTGTAGTTGCTTTGCCAATCAGCTGACTGATGATTTTTAATGGAAATGTT
AAGATAAGTTGATTGATAGTATGAATGGCTCCTATTTTGGAAACAAAAGT
ACTTTAATTGTGGATAAAAGGggtaaaaattttaacttttttggttGTTC
TAATCTAGCTaaacaaattatattttcatcAGCTCTTATCTGACAAAGTC
ATTAGAGAAGACTCTAAGATATTGTATATAGTTTTAACAAGCctagactt
tttgataaaatatacCAAAGTTAGTCTTCAAACAAAATGAAAGTAGACAT
ACAGGCACAACAAGTGCCTATATATTTATTTAGAGTATTTTTGTAGTGGG
AAATTTTgagacaaatttttatatatttttgcttctttttcaaGTATAGT
AGTGATATGATATTCATACTACAACTCTGTCTAGACATCTGTACTTGACA
GTCTTGTGCTGTTGTGCCAAAGAGGCAGGCCAGGTATCCCCAAAATGCAC
TGGATACAACATACAGAGCGAGTGCGTGTAAAAATGGTACATCACGGTAA
AATATTAGTCTTAACACTGACCAAGGGGCCATCCATTTAGTACTACATAC
TGAGGGGTAGAGGGGGGTTAAGCAAAAGTACATTCATTTGTTTAAATGAC
AACATTTCTATTGTTTCTTGCGTTCAACAAAAGGGGGATATCTATTTATG
ATAATATCATGGCAAAAAACTTTTATTGTGAATGCTATATGGATGACGCC
AAAGTCTGAAAGTGTATAATTTAGTTTTGCACGTGACTTTTTCTGTTTCC
AATCCAGTGCACATCTGATAGGgttgttattttttgtcattatatTGATG
TTGAAGTTAGTGGCTGGAgtgtttcattattttcaatgaTATGATAATAT
TGGTTACAGTTGGCTAGAAAAGGTATGGTCATAACGATGGCTAGCGTACT
CTCTCGTGTACTACCAAATCGCTGGGGGTTGGAATAAGTGGGAATTCCTA
aatgtaaaatttgtaaaaagaaggcttatacagcagaattagggcaaaag
agggaactttcaaaaacatttttccaaaaattaatgagCGGAGGGGTtga
aataagaatgtcctgggtgaaaNcaaaagagggaactttcaaaaacattt
ttccaaaaattaatgagCAGAGGGGTTGAAATAAGTATATcctgggtgaa
aaaattaattagctgGGGCGCTTATTAGGTATCAGAGAGTAcataatttc
acttttttttttaaattttgttacaatttttcacAGAGAATAGATTtgct
caaatgttttttttttcaaataacgtAGTGCTTCATGGTCACTAAGGTGG
CTAGAATAGACATGGTCATTTCGACGGCTAGCTTTacgtaatttcaattt
tttttggagaattttgttacaatttttcatagagttttgctcaaatgttt
ttttttcaaataacgtAGTGGTTCATGGTCACTAAGGTGGCTGgaatagg
catggtcatttcgatggctagctttacgtaatttcaatttttttggataa
ttttgttacaatttttcatagagttttgctcaaatgttttttttcttcaa
ataaggTAGTGGTTCATGGTCACTAAGGTGGCTAgaataggcatggtcat
ttcgatggctagctttacgtaatttcaatttttttggagaattttgttac
aatttttcatagagttttgctcaaatgtttttttttttcaaataacgtAG
TGGTTCATGGTCACTAAGGTGGCTAGAATAGACATGGTCACTTCGATGGC
TAGCTTTacgtaatttcaatttttttggagaattttgttacaatttttca
tagagttttgctcaaatgtttttttCTTCAAATAACGTAGTGGTTCATGG
TCACTAAGGTGGCTAgaataggcatggtcatttcgatggctagctttacg
taatttcaaattttttggagaATTTTGTTCAAATAACATGGTGGTTCTTG
TTCACACAGGTTACTAGGATCGTCCTTTAAGTGATGGCACTACCAATTTT
ATTTGATGtctattttagcttttttttgaagattttgcaaaatgattact
ttttaatggctgGTCTTccataattttgaatttttttgatacATTCATTA
CAATTTGTTAAAAGATTTGATCAAATTAATTAATATTCTAATGGTTCTTG
GTCACAGAAAAGAAAAGCAATGGTCTTAAATGGCTAGCTTTACCTAATTT
AgagattttgacaaaaaatgatttGGTAGTAGCCATCTATTATCTTTTAC
ACAATCACAAAACCttgcaaaattaattttgggCTGTTTCAGGCTGTTCA
GGCTAGAATTTCCTCTTTTTaggcaattttaaaatttgaaactttacTTG
CCGGTGTTTTCAAATAATGATTTCCttcaatgttttttgttttaaaatta
aattagatAAAAAAGCAGTATGATGTAGTTCCCAATGCTATCAATAATGG
TAGGACTAGTACTAGTAGTAGTCATGTAGAGTAAGAATACATAATACAGT
AAGGGAAAGTAtaaatttttacctttttttaatgTGTCTAAAACTGATAG
AAATTAGGGATGTTATAGCTAGTTTTATGCAAAATTGACATGAAAAGCAA
AGGTAATTTTCTTTAGTGTAACTTCCAAAAGCAAAGGTAATTTTCTTATA
TAGTGTAACTTCCAGTGGGACTTCATTCATATATTCAGCACAGAAAGTTA
TTTACTGTTAGTTGACTCTTTCTTATTGAAGGCTGCTACATCTTTTCTTG
GGATTTCGAAATTGCTCTAATATACCTTTCATTCCGTAAAGTGAAATTTT
TAcctctttggaaagaaaaaattgagtggacgattttaaagctttgttaA
GCGAAGATTAgcaaagtttttcttctttttgtccAGTGAAAATTGTCCTT
ATTTTTCAGCGTCCTTTTTTCCCTGGGTTGGTATTTTTATCCTATTAATA
TCGTGTTATAATGTAATTTATTCTATATTTTCTAGTATCGTAAAACGAAT
GATGGAATCCGACAAAGAAGAATTCAAATCGCAGTCGTGGGGTgtataat
gaatttttttctcaagaacaGTTCGAATTTGCATTCGAATACGGATAAAT
GGTACGTGGTCGAAAACTGTAGTGGATGATATAGTGTAGTGGAAAATATT
TTCGCATCGTTGTTCCGTCTGAAACCTGGATATCACCATTTTAGACATTT
GctacgaaattttgaattgcatCGGAATTGTATGGTCTACCTTCTGTTGG
ATGGTCAAAATAGGGTTTAATTTTATCGGACAAATCggagaatatttttg
ttttaacttttaaagtattttattcGTCAAACCTGTCACAAGTGGTTCTT
AtgcttttaaaaatgtttaacgAAATCTTGAATAGCACATCGGACATCTT
TTATATGCTGATAaggcgaaaaagaaaaaatgtagtgtttccggaatgcg
ggtgaagtaAAAAAGCTCCCATTCGGCCGgccggaatttttttttctgcg
aTTTCTGATAACTTTATATAGAttattgaaatagaactttaaaggaTAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035600TCONS_00035600Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001339supercontigsc0001339:63064..66813 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.67	1.51	0.16	0	27.52	17.52	21.27	19	16.05	19.46	24.5	18.38	17.52	18.45	7.38	6.91	8.52	14.07	10.15	9.36	23.95	22.2	8.16	11.15	4.46	7.18	58.48	50.32	35.46	37.65