XLOC_020657 (gene) - C. hemisphaerica

Overview
NameXLOC_020657
Unique NameXLOC_020657
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001303:25836..32252+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020657 ID=XLOC_020657|Name=XLOC_020657|organism=Clytia hemisphaerica|type=gene|length=6417bp|location=Sequence derived from alignment at sc0001303:25836..32252+ (Clytia hemisphaerica)
atcatttcaaaaatgaaacagTGCGAAGTGTGTGGCCTTCAGTTGGCCGA TGCTGAGGCGCTCTGTGTTCATTTGATGTTGCACATTAATCATCCGTTCA GATGTAGTTATTGTCTCAAGAGTTACAAGACAAAAGCGTACTTGAAGATT CATTTAAAGAAGGGAAAATGTGTAGGACAAGGTAATTTCTTAATTTGTTA TACTTTTAAAGACGTAGAGGTTGACAATTGTGGATTACGATGAAGATTGT TCATCTATTTCACTTTTAGTAAATTTTCAAAAGCGACAGCCACCAATCGA ATTGCAATCTCAACAATTCCAACAGCAGTTTAACCAACAACCACAACAAT TCCAACAACCACAACAATTCCAACAACCAcaacaatttcaacaacaacaa caatatcAACAACAATTCGAGCAGCTAACAGTAAACGAACAGCAAAATGT TCTATTTGAACAACAACTTTTACCGACAACACCTGTTTTAGACCAGCAAA TACAAAATGGGCATTCCTTTCAATTACTCGATTCAGTCAATGAACAGATT TGAAGATCCACCTGTCAACTCTCCACCCTCATTATTTGATCTCATTGAGG AAATGAATGAAAGCTATATGACTGATCTTCCGGCGACAACAATTCAACCG GATTCGCTGGTAGATTTTAAGTTTACTATACCTCCCACTGTTGATGACga taaaaaatcttcaaagagTGATGATCCCCCAGTTCATATAGATACTCAGA CATCTAATCAAAGTAAGTGTGAcacgtaatcttttttttttttttttttt aaaagagaatGAAAATATGTTAAGATTAAAATATAGATTAAGGATTATCT CTTGGATTGATATGCtctctctttctttcttttttagaagCTGCTAAAAA GAACAAACAATGTATGATTTGTAATCAATGTTTTAGCAGAGCTTCTCATC TGAAATTTCATCTTCAGCATTGTAGTAAAAGCTCAAAGTCTCATACGTCC AAACCAGTGAAACGTAATCAAACAGGATCAGGAGTGAAACTTTCAAAGTC AGCTCTATCATCGGCAGCTGAGATTTTTACTAAAGACTTGAGTGGAGAAA AGAAATTGACATTGCCTTTCTTACTGGATGCCttcgaaaatattttagat GGCAAGAAAGTTAACGGTGTGAAATGtgttttatcattgtttctaATCTT TTGTAAAGATGATGATCCAAATAGACTGACAGATCCTCCTATAGTCTTAA AAAGTAACActtttacatgtttaaaatgttgAGAAAAGCTGTGGAGGAAA TTGAAATCAAGATTGACGATTTTCAAGCCAATGGTAGTGGATGGGTTCTC CATCATTTGTTAAAAGTAGATTTGGGATGTGTTGTGTACGATCCTTTGAA AGCTTCCTCTTATATTTGTTTACCAAAAAAGATTGCTGataaaaaagcat gtattaACATCCAAAACAAAGAAGATGACAAATGTTTTCTTTGGTCAATA ATAGCATTTGATCATAAGCAAAATGAACATGCTGAGAGAGTTACACATTA TCTTGATTATGAGGAAGATTATGACATGGAAGATATTTCCTATCTAGTGA AGCTAAAAGATGTGAATAAGTTCGAAAAACAAAACCCAGACTATTCGGTG AATGTGTTTGGATATGATGACAAAAAGGTGTTTCCTTTACGGATTGCAGA TAGTATCAAAGATAAACACGTCAATCTTCTACTCATTACCAATAAAGACA ACCATCACTATGtcttgatttctgatttctcaAGATTGATTCGTTCACAG GTATAAGTTTTATAGACTTAAGAGTATATTATCTAGATTGTTTGTTTGCC TGCTTACAAATTATTGTTTTTAAGATTGATAATAATGATTTTAATCggta atttttgtattttcttcttcttcttttttctgttGCAGGTGACAAAGAGA GTTTCAAAGGaatatttttgctatttttgcctGCATGGATTTGTTAAAGA AGAGACCTTGAAAAAACACATTCCATATTGTTGTGTGAGTATTTATCAGA TTATCACAGAATGGAATTTTTTTGGCTCTATTTTATTGATTCTTCTGTTA GGCTTTTTACACTGTTTAAtaattgatttcttttatagGGTCATGGTCTT CAACGCATTTACCTACCTAAAAGGAATGGTACAGATGATAAAGTGTTTTT TAATTCGACAAAACCTATGCTTAGGATTCCCTTTGTAATGTACGCCGACT TTGAGTGTCTGTTGCAACCATCTGAAACAGTAGTTCATGGTGGAAAAAAG GAATCTTGGACATCGAAAGAAGAAGAACATGTACCGAGTGGTTTTGCTgt ttatacaaaatgtgatgatCCACGTTATTATCAAGAGCCTTTTGTTTACA GAGGAGATGATTTTGCAGTAAAGTTCATTGATCATGTATTAGCAGAGGCT GCTGAgatcaaaaagatttattcaaGAAGAATGAGAGCCAACCTCACATC TGAGGAACAAACTGAATATGATAATGCGGACAAGTGCTACTTAtgcaatg atgaatttattacTAATTCGGATCATCCTGATTATAAAAACAGACGAAAA GTTTTAGATCATAATCACCTCGACTCGACGTATCGTGGAGCATGTCATTC GATATGTAATTTAAACTTGGCAATCAATCCAAAGACAGTTCAAATTCCAT GCATCTTTCATAATCTTAAAGGGTATGATGCTCACCTGATATTGTCGGCT GTTAAAGCACGTCACGGTAAGGTGACTTGTATTCCTACCAATACCGAGAA ATACATAACATTTACAATTGGAGATGTTCGATTTATTGATAGTCAACAAT TTATGCCACTCGGTaagtttctatttttttttttttttaatacattatca actttgttttctataaaaatgatgatgatatgttattaaatgaaatttat tttgttatagctTTGGAAACACTGGTGGCAAATCAAAAGGGAACGTCTCC TAATATGAGAGAAAATTTTCCAGAGGTTACGAAATATCTAATTGATATCC ATGGAGAACATCTAGAAGATTCACACCGGCAACAAAGACTTTTCGATCAC GAATTGTTAAATGTCTGACGATAACAATGGGAATGAGGATGAAAATAGTG ATCTCGATACAGATACAGAGTCGGTGGATTTGAATTTAGATGTAATGGAC TTGgatgaaatattggatcaagtTGTTGATTTTAGAAGACAGCCCTATAC GACTCCGACTTTAAATACTTATCAGGATGAACAGGTATTACATTGATTGT TACAAGTGTCAATAACTATCACATTTCTCTCATTTACTATTGTTAttatc cttttttatttttgcaataaaaacttTAATATCCTTGATTTCAGGTAACG AGAAAGTTGGATCTGCTTTCAAGGAAAGGTATCTTTCCGTATGAATACAT GGATGATGTGAAGAGATTTGAGGAAATGGAACTCCCGGATATAGACTTTT TTACAGCAGTCTTACAGAAACAACTGTGTCAGAAGCTGACTACGAACATG CTTTAAATGTTTGGGATTGTTTCCGTATAAGAAATTTGGGGGAATTTCAT GACTTATATCTTCTTAGCGATGTGGTTCTACTGTCAGATGTTTTCGAAAG ATTTCGAAGTGAATGTATGTTACATTACCAGCTTGATCCGGCTCATTTTT GCTCTGCGCCTGGTTTGTCTTGGCAAGCAGCACTAAAAATGACAAAGGCT AAACTCCAGTTGTTGTGCGATATTGATATGCATTTGTTTATCGAGGATGG TATTCGAGGTGGTATATGCATGATTACTGAAAGGTAcatttaattctttt tgtatttgttttgtataaaaactttCTAAGGgcgttttgaaaacattaaa tcacTTATCTTTTAGGTTTGCGAAAGCCAATCATGAACATTCTGTATCCT ACAATCCAAATCTTCCAAAGCAATACTTAATCTATGTTGACGCTAATAAT TTGTACGGCTTGGCAATGAGTCAACCATTACCAATTTCAAACTTTCGCTG GCTGTTTCAAGAGGAAATCAGACGTTTCAACGTGttggatattgaaaatg atAGTGAATATGGATACATGCTAGAAGTGGATTTAGGTATGTTGATTGAA TGAAATATATTGTTACATctgatctttgaaaaaattaatattcTATTAAT ACTattcttttttgactttttctttttttactttagaTTATCCAGATTAT CTTCATGATGCTCATAGAGATTACCCACTTGCCCCTGAAAAGTTATATGT CAAGCCGAACATGCTTTCGGGAGTTCAACTGGAAATTTTAGGAGTCGATT CTGCTGATGAAGTTCAATCATccaaacaaatcaaattggtaCCTAATTTG TATAATAAGAAGAATTATATCCTTCATTATTGGAATCTGAAATTTTACAT AAATCATGGGATGAAGCTAATGAAAATTCATCGTATATTAAAGTTTAAAC AAGAACCTTGGTTAAAAAGCTACATTGATTTCAATACTGAAAGACGTGCA AATGCAAGAAACAGTTTCGAAAAGGAGTTTTTCAAGCTGATGAATAATAG CTGTTTTGGAAAAACGATGGAAAATCTTAGAAAGCGTCGAAGGATCGAGT TGATTACATCACGTGCGATACTAAGAAAAAGGGTTGCTCAACCGTCTTTT CATGATTTTCACATCATCAACGAAGATCTCGTTGTGGttgaaagaaagaa aacgtCTCTTCTTCTCAATCGACCTATTTACACTGGTCTTGCTGTTTTGG ATATTTCAAAGGTATGTCGTTTTTGCTTAATGGATTtgaataatattttg attttctcaatCATCGTAAAATAAAGTATCTAATAATCTTTCTTTCAATT ACCTTTAGCTGCACATGTATCAATTTCATTATGATCACATCAAACGCTTA TATCCAGAACGAAAATCAAGGCTGCTCTTCACAGATACGGACTCGTTAGC GTATGCAATAAATACAGACGATATTTATGAAGATATGAAAAATAATGTTG ATTTATATGACTTTAGTAATTATCCGGAAGATCATAAGTGTTATTCTGCT GCTAATAGACTAGTCATTGGAAAATTTAAAGATGAATTAGGTTCTTTGAA TATGGAAGAATTCGTCGGTCTTAGATCAAAAATGTATTCGTTTACATACA AAATGGAAGATAAAATGAAAGAGATTAAGAAAGCAAAGGGTGTCAAGAAA AGTGTAGTAAAACGAAAAATCTCACATATGGATTATGTTAAAACATTATT TGAAGATGAGGATCAATATAGAGAATGGAACTCATTTAGATCATATAAAC ATCGTATCTATACAAtaaaagtgaataaaaaatCGCTCTCATGTTTCGAT GACAAACGCTATATTCTGGGTGATGGAATTACAACCCTTCCTCATGgaca taaaaatttaatttaattatttgtttattttttgatattatatttatatc taattgattataattttttcatatttacaaAAAGATTTGTCCATATCACT GATCttcgaatttttttgtcaaattctcctttgtttttgaaatccATTGG GTGTTTCTCATTAATTCTGACTTTGGGATAGTTGGTTCATTCTTAATTTC TGGATGATCTTCAAATTTTTCTCTAAGTTTTTCATTAacatcttcttcat caatttcgTCTGAGAGCACTGCAAACAAGAGATCAATTCTTTCCCTTGCA AGCATCATGAGACAATCATGATGTCTCTGGCTGGGATAGTTATTAATACA TCCTTCACAAAACCTCTTGGAAGTAGCATCATAACTTGACAGCATTTGCT CCACGTATATCTGACTCAGCAAATCCaataatttttcctttgaagCAGAT GGTTTTTCATTTAAGTTGAGTAATTGATTATATGCATCTTGCATTTGTTT GATGATTGTGGGTATTATCTTGTAGTGAATCATAACCTTTTTTCTCTCTG TTGGATATTGAATTGATTGTTGACTAAGCATCAAAAAGTTATTTGGTTGT TTATCGCTTGATGCATGATTTGAAAGATCAACCAAAGTGTATTTTGTACT TACACTCTTCCATTGTGTTAGCCAATTATCAAATATGTCTTGTGATGTTG GAATCcttttttctctgattttcttcttctttgaagCCTCAGGTGCTTct tgattctttctttttctattttctgtGGAATCAGCTGTCATGGTGAAGTA CTTCTAGAAACTGATATTACCATGGTTTAAATGTTCTATTTATACTGGTT GGGAGGTATAATTTCAATGGATTAACATATTTCTAAGGTATTAATAGAAA AACGTGGTGTTTTTGGATTAGTGGCATTTTCGTGGCGTatcttgttttaa aaaaataatcaacttgc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00035365TCONS_00035365Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00035365-proteinTCONS_00035365-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001303supercontigsc0001303:25836..32252 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.11 0.05 0.1 0.2 0.21 0.66 0.77 0.37 0.22 0.87 0.81 0.22 0.27 0.21 0.24 1.04 0.97 0.25 0.52 3.12 2.39 1.34 1.59 1.11 1.65 60.57 51.27 0.43 0.36