XLOC_020365 (gene) - C. hemisphaerica

Overview
NameXLOC_020365
Unique NameXLOC_020365
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001237:67171..71529+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020365 ID=XLOC_020365|Name=XLOC_020365|organism=Clytia hemisphaerica|type=gene|length=4359bp|location=Sequence derived from alignment at sc0001237:67171..71529+ (Clytia hemisphaerica)
TCTTTGGATTCTTGGGACTTACCTTTTGCTTATTTTGGAGATGATTGTGC
TAGGTATTGAAGACTTAAATTAAGAATTTCTGCAGGTGTTATCCATGGTT
TAAGTTTGTATCTAACTTTGTTTTGCACAATAATATTTATTTGTATTATA
CATACATTATACAGTTTTGTTTCCTGCAACTCCAGAAGAACTCATTTTTG
GGCTTTTCAGGAAGCTCTAAAAACCCTACcctatcaattttcttgtttAC
TCTTCATATAAAATCAAATTGTCACTAATTTTAGAttgataattaaataa
aaacattttctttggaaatgGTAATTGATAATTTGTTGTCATCATGGATA
AGTATGTATTTGGAATGTATGGCAATGAAGATCAACTAGATAATCATGAC
AGACTTTATAACAAGGTAAAGTAATATAATATCGGATTTATTTTCTTGCA
ACATTGATTGATTCTAACTGAACATTTTAACTGAACATTCAAAAAGACAA
AGAGAATGGTCTAGGGCTAGTAATGTATAATACTTCAAATCATTTCCACT
CTATTCTTACTTTAGTTTCTCGATATATTTGTGCTTAACCCAAGAACACA
CATCAAAAGAAGAAGAGCATTGTATACTGACTATGAAGTTCATGTCAAGG
TGAAATTGAAAGTTTCCTGTTTATACTATTTTGAATACATAGCGTCAGCC
TATGTTTAgatcccaggcaaaaattagccCGCCTGAGTTTTCAGTCCCCC
AAATATTCATGGATTTTTTTGTAGCCCCCAGGCTTTTTACCCTCAacact
ttcaaaaatttgttcTACCAAAAAAGTGTTATTCAATGTAAATTATGTTG
CAGTTCTAAGCTTAAGATAAGATATTTTGCTCATTTTATATGAAAATATT
GCGCCACAGGCAAAAGTTTTCAGCTTCACAAGCTTTGATTTGAGTAATTG
ACGCCAACCATTAAGCTGAAGTAATCAAAGTAATCAAGTAAAGTAGTAGA
CTTTTGGAGCGTAACTTCCCCCCGCCACTTTCCAGGGGGGAGTGATGGTC
AGGAATATTCTCTAAAAAGACGAATGATTCTCATTTAATTACAGTTTATA
GAAATTaaagcgatttttaaatacttttctttttacaaTTAGTGCTTCAA
CTTTTTATTTACCATTCAAGTTTATTATTATATTTATCGTGACTACAGTA
ACTCTGGTTCTTAGGCCGATAAAACTGGTAGCaatatatttcaaattatt
gaataacatgtttttttaatagACAAACCATCCAGAATTTGCAATCAAAG
ATTCTCAAGTACGAAGAAGATACTCTGAATTTGCGTGGTTGAAAGCCCGA
TTGGGAATGAATGACATCATGATGACGTAAGTATTGGAGAATTTTAAGAT
AATAGTATGAATTTTAACAGTGCTTTTAGGATCCCAAATATGTATTACAT
AGACGTAGAATTGTTGATAAAAATAGACCAATTTCAGTGTAGTTTATTTG
TTGAAATTGCCCAGCTATACCTTTTgtcacaaaactttttttataatatc
tttccttactgcaaaatattttgatgacaTCAACAAACAACTCCTTCAAA
ACATTGGCCTagaaaaaaattgctataaGCAGACATGAATTTTGAGGCCG
ATTTCATatcttataacaaaacaaatcaaagcAGATCAAAGGGAGTACTA
CTCACGTAATGCCAAATGTCCCATCGTTCAAAGACAATTCTTTCTCGGCT
ACCGTTTATTCAATATCAATCTTTCACCAATGAGTCTTTAACCTATTTTG
TATATTATCTTTATTtcacattttagatttttaatctAATAATAAGGATT
CTTTGTTTCAAAAAGAAGctattttttagatttctacATTTTCATTCTAT
AGAACTGCACCAAGCCTACCTGGCAAGAAATATGTTGGCCGATTCAAAGA
CCCCTTTCTTATGAAACGCCAGATGGGACTGCAGCATTTCATGAATAAGT
TTGTTTGTTTCTATATTTAATTTGTATTTAATGTATTGTCAGGTTAGCAG
AATGACatttgaaaaaatctcaaatactATATCTTCCGTCCAGGGTTATG
GGTGAATTGTGTCTTTTTTAATCCATGTTTGGGCTTGTCATGCTTCTCAC
ATCTCGTCTTCCTAATCTAATCTTCCTAATGTGTCTCATTTAAGTTAACA
GGTTACAGTATATTAATTCTTTATCCTACACAATAACAATATTTTAttac
tttcatttcattttccaGGGTTGTAGAAGTGAATCCATTTTTGTCTGACC
CTGCGCTTCATTTGTTTTTGCAAACTGAGCTATCAATATCACAAATGGAA
AGTTATCTCAAGCACAGTGTATTGCTAAGTAATATTAGAGACCGTGTAAT
AGCTGAACAAAAGCTGAGAGAGCAGAGGAAGAAGAACAATGAAGATAACA
TGAACGAACTTGCATGTTCTGATCAAAATTGCCTTTTAACTCGTTCATTA
TCATTGGACACTATTTTATCTCTCCGTAAGGATGAGAAGACAAGTGAGAA
AGCTCCTGGGCGTGGCTGGTCTAATTTTATTGGAGAAAGGNCCTCCGTAA
GGATGAGAAAACAAATGAGAAAGCTCCTGGGCGTGGCTGGTCTAATTTTA
TTGGAGAAAGGGGCCAGAGGAATCAGGTGTTTGCGGATAGAGATGTCATT
GATTTTCATCGTAAGTTTTCACACTCATATTTTTCACGCACTACGTAATT
TTCTTCATACAtttattaccttaagggaacttattttggcgggaactaat
tttggcgggcagcaaatatcctaaaatcttttaattttggcgggaacttc
ttttggcgaatagtgaatttttttaattttggcgggaactaatccgccaa
atccaccaaaattagttcctgccaaaataagttcccttaaggtatattaA
GATTGCTTTTAGGAATCCCCCCTGTTGTTTTACTTTGGAAATGTCGATGA
ACTCAAATTTCTCTTTTGAATGTtacaggaaaaaagaaaaagattagaCA
GTGTTGCATGGCTAGGCATCTATTTTCGTgattttctgcaaaaaaaattc
ggTAAATTTATTATTCTATTATTGAATCTACAATACAATAAAGGGCTGGA
TGTGATCGTTGCAtgtaatttattgtttttattttcaaaggttttggaTC
TTCAGAGACTTACCATAAAGAATCCAAAAAGACAGCTTGTGTTTTACCAG
GTGGTCAACTACAGCTTGCTGATACTGACGACTCTTGCGACcgagttgat
ggttttgaacCGTCAAAACACAGGCGTTCGGCAAGTTGGCATGGAAAAAC
ATTAGATATGATTGATTTCTTACTAGACAGTTATGACGTGATTGATATCG
ATAAAGCTAGCACTATAGACTCATTTTCAGTATCACAATATTCGAACCCA
AACTCGAACAGCTCTGGCACTCTTGATGATAATGATTCATATAGTGATGA
TGGAATTGAAATTGACATTGATTCACGTTTATCTGAATATACCATCATAT
CTCCTCTTACGTCACCGAATAAGAACGAAATGCCTTATGGGCGTCAATTA
TTAGAAGCTGTTGAAGAATCGTTGAACAATGGACATGATATGGTGCTAAA
ATCTCCTACTCCAAGTCTGCGATCTAATGCACCTAAAGTTATCCAACAAA
CTTCAGAGAacacctttgcttcattggatacTGAAGGCTTTCATCATAGT
GATAGTGATAGTTTTAGTTCTTAACAAATTTAtaatacattctttttcaa
tttttagaaagtttatAATAATTATAGTAATTTAGTATTAAAAAACACCA
TGTCTTTTTTATACAGAGTAAAACACCAGGTATTTTATATTGAATTAATT
TATTAgttttaaaaaatgcaaaatttttttttttgaaaccatttttaaac
ctttttcaagTCCTCTACAATTCAAAACATACTTTCTAAAAAATAAGTAA
CTTTTTCACCCTTAAAAGTTTTTGATCAGTTATTATGAATTTGCCACGAG
CCTTTGAGTCTGTTTGAGTAAGGATTCACAAGTAACAACATTAGAatctc
ttaaaatgtttttcctcaaatatttattatagtatagaattttcaaatta
tttttttaactttcattaATTTCTTACCTACATTTGACATTTTTATAGAT
GCATCAGATTTGGGGGGGCTAACTTTAGTTACATGTAGATTAGAGTTAGT
ATAAAAAAGGAAATTAAAGCTTTGCTTGTGTGAGTTTTATACTGAAAACA
cacttaaaatttcttttttatgtaCATTATTTAAGAATTTTACGTTCATG
AAATAAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00034979TCONS_00034979Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00034979-proteinTCONS_00034979-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001237supercontigsc0001237:67171..71529 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.31	2.6	1.22	1.2	16.81	13.08	8.42	10.28	7.46	8.57	6.45	4.64	5.78	5.57	6.94	6.74	7.29	5.07	4.06	5.86	4.69	4.04	17.25	14.72	3.28	4.03	7.43	5.16	12.46	13.18