XLOC_020323 (gene) - C. hemisphaerica

Overview
NameXLOC_020323
Unique NameXLOC_020323
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001231:52498..55928-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020323 ID=XLOC_020323|Name=XLOC_020323|organism=Clytia hemisphaerica|type=gene|length=3431bp|location=Sequence derived from alignment at sc0001231:52498..55928- (Clytia hemisphaerica)
AAAGAAAATTCAATTTTTATTAAAGCTAGAAGTAAAATTGATAAAACTAT
GTTTCGGAAGGTAAAAGGTTTGATTTATTCTACTTTTGAAAATATTTCAG
CAAGAGAGACCAGGGTAGCGCTGGGTAGACCGACCCATAATAGGGCAGTA
TTCAGACCCCTAAAAGATTCTATTCTATTGGAAGTTCTACTACCCCTTTA
AGACGTGAAGGACTTACAATTTGCTTTGTAAATAAATTTAATTTTGAAAG
TCAATGTGATGGATCTAGCGCACACGCACTCACTTGCTAACTTGCTTTCA
AAGGTAGAATTTTAAAAAAGGAAAAAAAAACCTTAACGAACTTTTCCTAA
GAAATTATCAAGTCTGATCGACCCAGAGGCTTTTAATAAGGTTGCCATTT
CCCCAATCTGTTACAACTTGGGCTCACAGAATTGATATTTACATATTTCT
AGCTTTCAAGGAGTTTGTTGATTATCGAAGTGTTTCTAATCCCTTTCACC
ACTTCTGTATGGAGTCAACATTTGTGGAAACTTCAGTCCTGGACACCTTG
CTCAAGAACATGCCAAGGAGGTCAGTAAAATATGTTCAGAAATATCTCAT
TTGGAACAGCAAGTACCTAAGAAATCTTAAAATTCTATACCTTTAAAATA
AAGTCATTAGGTAAATCGAGGCTAGACATATTGTATACCTTTGGTTAAAG
GCAAATTAAATCGAAGTTTGAAGAATATTAACGAGCACCTCGCAAAAAAC
CGGAATTTTCGTCTCGTTTCTTGGTGAATTCAACTTTGATGATTTTCTAG
AAAACGAAGCCTTTCAAGTGTCCTGACGCAAACTCGATTTTCCCTACTGC
AAGAGCTTCAAAAGTTTAAAGTAACGTCAAAACATCTAATGTTTTGAGTC
CGAAAGCCTGAGCTAAAAACATTAGAAAAAGTCGCAAATTGGAAGACTTG
ATTGGGTAGAAAAGACGGAGAGTGGTCTAATTCAGGGCTAGAAAAATTTC
TACTCAGCCTGCTTTTTTGTCCGAAAAGTCAAGTACACAGTTTCACAATC
TTTGTAATTACTCACTACTCCACCCCCCCCCGCTAATTAATTTTTGGGAA
AATGGCTATTAGGTACCCGAGAGTAACTCGTATTTTGAGTACATAAGAAA
CGTGAGAGCAACGATAAATGCAAGAGGTCTTGAAAAATGAATAAAAATTC
ACTCATCTCTGATTTCCAGGTTCAAAGAAAGCAGTATTCGGTTGTTTTGA
TATTCTTCAAGAGAAGTTTGTCAATGAAAGATTTTGTACTGGATACACAA
AATTTCATTTAGAGAAAGCCTGTAACTATGGAATTCATTGCCAAGCTTCA
ATACTAAGGTAACTTCGAGGAAGCGAATTTTCACTTTCTTATCTTATAAT
GAAAAGTTTTTGATATGCTCAAAATATGAATAACTTAAATAGTAGCCATT
GACCACCATGAGCCAAATCTACTTCACTTAAAATTTATCGTTATGATCTT
TGACTTTAACTATGTACTGAGCTAGCCTAGAAATCTAAGCTAGTTTGAAT
CAGTCACTAGAAAACTAAATTTCTAGAATCCGAGGCTAACATTCGTGATA
TCAATGAAGTATAAGCCCGAAGGGCTAGGGGTCAATCTCTAACCTTTCTC
TGGCAAAAAAATGAAGCCTTAAAATATGCGCCGAATTTTTGACCACGGAT
TGAATCTAGCGATTCCTTTGTTTTCGAGTGGTATTTTTTTCGAAATTTAA
GCACAATTTTTAGTTTAAATCTGTCATTTGTGTAAAAACCAGGCGCACCG
CGCTAGGCCACGCAACTTCAGCAGGATTTGGTAGGCTTCAAATTCTACCA
AGGAGATTCGATTCTAGCCCTTTGGGCTTATACTTCAATGCGTGATATGA
AAGAATCTTTAAAGCACCGATATTACCGATAACTCTTTACTGCCGTAAGC
CGCATCTTAGCTTTAATCTTATGTTTTAGTCAATAGTTAGGCTTTGATAT
TTGATTTCCTTCCTCCATAGACCACAAGCCTTGAAACTATACGAAGGTTA
TTGGTTTAAATCCGAAGAGTTTGGACAATGCACAACAACGTGTGGACGGG
GCGTTAGATCAAGGCCTGTCATGTGTATTTCACGGACCGAACTGAAAATG
CTAGATGACTCTAAATGTCCGGCAGACGAGAAACCAATCGGATCGATATT
ATGTGGAAATAAAGAATGTCCGGTAATAGCTGATTGGAAGATCGGAAATT
GGAGTGAGGTAATTGATTGAGCTTCGCTTTTGTACGAAAGTATTTAACTG
TATGTTTTGTAGGTGAGTAAAGTAAATCATGTATTATTCTTTAGAGATTC
TTTATGCCCCACATTTTTTATTTTACTGGATGTATGTGGTAAAAATCTTC
TCGTGAGAAAAATCATAAAAAAGCGGGCTCAGGGACTGAGGACTATCTTT
CCCCTTTAAAAGTGACTTTTGAAGATCAAAACCTTATACACAACCTTTAC
CCTTTCTTTAGTGTTCATCGACTACCTGTGATGGAATACGAACGAGAACG
GTGAATTGTCAAAAAGAGAGCGGGGAAGAAACCTTGCACCGCCACTGTGA
AAAGAAACGCCCAAAGCCGATCCAAGAAAAAATCTGCAGTCCACCATGTG
CTGTATGGGTGGTAGGCAGTTGGGGAAAGGTAAGCAAGCACAGTAGAGTC
TCCAGAACTCGAAACTCTATAGCTCGAATATGTATCCTTAACTCGAATAA
CTTCCAGGTTTATCAGCGGATTTAAGATAGCAAACCCTATAAACAAGTTT
TATTTTAACTCGAACAAATTTCCCGCGTGTTTTCGAATCGTGAAGACTTT
AATACAAAGAGACGCAACATTTTTGTAGAGGAAAGCAAAATTTCAGGGAA
TTTTATATGATCAAGTTGGAAGAATAAATAAATGATCATACCTCATTTTC
CTTAGTGTCGTTATAATGCAAAGTTGAAGAAATGTTCGGACGCAAAACAA
ACGCGTTGTGTGACATGTGTGGACAGGCGTACGATGCAGGTGTCAGATCA
ATGCTCGTTGGATCAAAAACCATCTTTAAAAAGAAATTGTACATATAAAG
ATTGTTGATCACTTGTAAATAAACTCATCCAGTATTTCTCAGCATTATTT
TCAAATTTCAAATATCATGACGAAATGTTCTATACGGAAACACCCAAAAC
AGCCCGGACGTTTGCCATTAGTTTTATTGTTTAAATTCAATATTAATGGC
AAATTCTCGTTGTTTTTTGGGTGATTTCCTGTAGAACATTACGTCATGAA
TATCACGAACGAATTAACTGGGATTTAAAATATATTTTATGTCTAACGAT
GTCTTTTAGTCCACGAGGTCATAAACAATACCATGTGTGTGTCACAGACC
CGGTGGGACACCCAAACCACTCGAAAATTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00034923TCONS_00034923Clytia hemisphaericatranscript
TCONS_00034922TCONS_00034922Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00034923-proteinTCONS_00034923-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001231supercontigsc0001231:52498..55928 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.31	0.48	0.26	0.24	0.29	0.09	0.22	0.31	0.37	0.83	0.29	0.26	0.14	0.05	0.1	0.09	9.48	11.91	0.14	0.12	27.57	28.29	22.89	33.31	24.68	18.32	2.68	2.21	0.56	0.25