XLOC_020143 (gene) - C. hemisphaerica

Overview
NameXLOC_020143
Unique NameXLOC_020143
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001204:73777..80397+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_020143 ID=XLOC_020143|Name=XLOC_020143|organism=Clytia hemisphaerica|type=gene|length=6621bp|location=Sequence derived from alignment at sc0001204:73777..80397+ (Clytia hemisphaerica)
tatatatcaatacttttttttttctaaaatgacagatattacatatcttc
actatatatatatattgtcAGAAATAAAACGTCATCATTGTTGgttcatt
ttgaatatcttcTAAGCTTttaaggtaattatttttttgttgatttggtA
TTTTGTAGTAGAATCGTTCTAAATTAAATGCAAGTAGAGCAGGGTTTTGG
AacagtatttttcaaaaagtcgaaaTAAACTCGGGAAATGTGTATTGTAT
GTCAAAGACGGTAGAAAACTTGTGTAGCAATCTTTAGCAAGTGTACAGNN
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ttttaattttggaaaagtagttatcgagatatggaggtataaagtcaaaa
gtcattattaaaaacagtcaaaaaacttcaaaaaagacaGAATCAAATTT
GTATCAGAACAAACATCTTTCCTTTGATCATTTGCTATTTCTTTGTCTTA
AAAGTTTCGTTAAGAAAGAAATAAGAAATATCgaattttaaccaaaaata
aaaagtaccaaAAGTAGCAAAAAGAGTTTTCAACCTTTGTTATTCTTTTC
TGAATCCCGGGGGGgaactacccttgtcgaccgacgggggtgctccgctg
aggttcgaaaaatggaccctacgtgggactcgaaatttgcgaaaaagtga
ccctgaatgggactgaaattccaaaattttctcaaattttctacttttcc
caaattttccaaaaaataggcaccctacgagggactgatttttctatttt
ggtgtttttgcgaccctacctgggactcgtggaggtttaaaaaggtaccc
tgaNcagtcaaaaaacgtcaaaaaagacagtatcaaatttgtataagaac
aaacaTCTTTCCTTTGATCATTTGCTATTTCTTTGTCTTAACAGTTTCGT
TAAGACAGAAATAAGTAATATCGAATTttagacaaaaataaaaagtacca
aAAGTAGCAAAACGAGTTCTCAACCTTTGTTATTCTTTTCCGAATCCTTC
cggtaaaagaaatcaaaatatgcTTCTCACTCGATGACTCTTTTTATTTG
TTAATCAATTAATTtgatactgtcttttttgacgttttttaactgttttt
tataatgacttttgactttatacctccatatctcgataaatacttttcca
aaattaaaaaatgatacatcaaaatttaagtttgcctttcctctttacca
ttaaaaagaatttagttaaaattcaatttttttctcttatactttttcgt
gggtcacccggtagcaatgcgagaagaaaaatgaaagaaatcagtcagaa
aatatagcgtttagcgaaaatgcataacgcaataaattcatcattgattg
ttgttgaTAGGGGGAGAGGGAacggttgtagggaaaaaataaatagaaag
ttctggtcgcaaaaatcagttttattgacaattgaatcatgctagatatg
gtgagcattgttatcaataatgtttttgtgtgaaaaacaatagaaatata
aggaaaaatccaatgaaaatctgcaaaagcggtgatttccgccattttca
accagttaaaaaatttttctcaaaaatcgaactcggccatgttttgagca
ttgcgaatacgcatctttctgcaaaaaatcagaaaaaactaagaatgaaa
tttcgagaaaatgtcaaaaaaccgttttttccgGCCGATATTTCCGGCAT
CTTcggccgaaaatttttttttttcgaaaaaggaagggaaacagtaaaga
aaaattaagtcggGCAAATatataccactttttagtgaaaataaagaact
tcctttcatacagaccaaatttcataacagtgctggaaaataatctacaa
tatatgtagATATACCCTTCTTAAACGATCCCCCCTCCTTGCTACCNNNN
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NNCCCCCCCCCttgctccccccccccccctttttagtgaaaatttctgat
ccccccttcttcacttttttggaaggtgtcatcccccccttaaaaaaggg
ggggttcGAACTatgacggacatgggttaatttaaaggacctccaccggg
gtacccggaggtaggtaaAAAAAGCCTTACTACTTaccttttctctcttt
ttggacctaccttaaggtagtcctttaaattaactcttgtccgttcgttc
gttcgttcgttcgttcgttcgtctgctgccagcttttctcaggatcggct
cattagttttttctaatttttgcacaatgatgcaaaatggtaatgcccaa
aatatgacggagcccgattttcgaaaaaaaaaattttccggtcgCCAGGG
CCGGAAAAGTCCcggaaaaagcggttttttgggattttctcgagatttta
tcattagttttttctgattttttgtacatagaGGCGcgttagtactgccg
aaaagatgttgaaaaccgttttccgaaaaaaaaaatttctccggCCTGTA
GAACCGGACATATTTCCgtgacattttttcaacttatttgatcgtttttt
tacGGAAAAAGGTTCTCTATGGTGATACCCAAAACTTTGcatcattaaat
tttcaataaaatcgtttgtccggaactccttaaaaatcgccggaacagcc
gaaaaccagCGTAAAACAGATATCCTTCATTTTTTTGAGTTATActtgac
agattttcatgattttttgcacaatgatgcaaaatggcaatgccgaaaat
gtgacggagcccgattttcgaaaaattttccacccgaaaatgccagaaac
atgccggaaaaaccggttttttgacattttctcgaattttcatccttagt
tttcctgatcttttgcagaaagatgcgtactcgcgatgctcaaaacatga
ccgagttcgatttttgccggaaatttccgtttttgcagattttcattgga
ttttttccttttaagtctttgtttttttcaaacaaaaacataatttataa
gaatgtccacgattaaccatggttcaattttcaatgaaactggtTTTGgt
cagaacagccgagaatcgccagATTTCTAGAATTTCTCGAGCTTTTCTTG
TAATTATTCTGCATNGTTTTGgtcagaacagccgagaatcgccagATTTC
TAGAATTTCTCGAGCTTTTCTTGtaattattctgcattttcatactattg
ttgtcatttttcaattgtcttattacatcaatcttcaggtaggtccattc
agcatgtagcttgttattcttgaaaaaatatgataCTTGCTTGTTGAATC
TGAGTTCtgcttgttaaaaataaattcaaaacaaaccatttacatGAAAA
accttgttgcaaagaagttacaaactaaagtactaACTAATAGGAGGCTA
AGAGACTCAAATGCTAAAGAATTGCATAAAATATTTCCACACATACAGAT
CAACTTTCTGTCGCCCTGTTTTGGAATCATTATTCCAGTCGGGTCAATCT
GTATTAGCAGCAATAACTGCCGCGGGGTTGACCAGTCAGACCcgactgtt
tgtttacatttgttcgAATCGGGCCGGCCGATCACACCGctagccaaaat
ccaaaatttccgcTTTTCTGCCGAGttgatatagtctaagacaatagcta
cccccgaaaaaaattcccgtcttcacgtttgatcctcttagatgaaactt
gTCTTAGACTAGAGCATAGtctagagcatgttgcattgcactaatgcgaa
aaaaaaaacttctcgtgtccccaagccttaagtattttatttttatgttt
aggATGGTGAAGTTATTCATTTTCCTGTTGGTTTTGATTGCCGAAAAAAT
AACAGTAAATGGACTACCAGAATCCATAACAGGTGGCTTAAAAGATAAAC
GAAGTGTTTTTGTTCGAGAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00034676TCONS_00034676Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001204supercontigsc0001204:73777..80397 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.93	0	1.94	1.9	0	0	0	1.03	0	0	0	0.65	1.96	1.26	0	0.56	0	0	6.38	8.58	0	1.91	1.97	0.89	4.6	0.88	1.18	0	0	0