XLOC_017009 (gene) - C. hemisphaerica

Overview
NameXLOC_017009
Unique NameXLOC_017009
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000769:48120..55367-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017009 ID=XLOC_017009|Name=XLOC_017009|organism=Clytia hemisphaerica|type=gene|length=7248bp|location=Sequence derived from alignment at sc0000769:48120..55367- (Clytia hemisphaerica)
ATTTGTTCTCAGAACAAGCTTTCTTATAGATTATACAGCACAAGACACGT ACAAACATGAAGATCATGTGTATTTTCTAGTAAGATCTGCGCAAGTAATT GTTAAGACAAGAAAAGTTTTGTGTTGAGTAGTGTTTGGACAGAAGGAAGG CTGATTGAAATCTCAACCAAAATGAGTCTATATTTTGATTTCTTGTCACT AAATGTTGGTATCGAGACTGGAAAAGTTAAAGCGAAGGAGCAGCAAGAAT TCGTAGAGAAAAACAACTTTCGCACGAAAGAAGAAGCAAAGCGTTATTTT TACTTGGAAAAGATACATGACGTAAAACCTGCTATTGTCTGTCTTCAAGA ACAAATCCCGAAAGACGTCAAGGAGATCAATGGCAAAATGATTGAAGACC TATCAGCAAAACTTAAAGCCAAATACACTCCTTTTTATGAATCGTATGGT TCAAATAAACAAGCTGCTGTCCTCGTCAAAAAGGATTTCATCTCAGACAA TTCGAAACTCAAACGGGTTGAATTCACTAATGCGGATACCAGGGAATATT CTGAGATTCGAGCCCGTTTAGTACTCGTAGAATTTACTCCAAATGGCTTC AGTCTACCGATCTATATCGGATCATGGCATGGTCCTTGGACGGGCCCTTG GGGTGGAGAAAAATTGGAAAGACAACGAAAATACGTTGATGCAATACTCA AAAGAGTCAAAACACACGTTGGAGAAAGGCCTTTCTTTATTGCTGGAGAT TTCAATCTCAAACACAGGGATCTGCCACAATTACCACATTATTGCTACAG TATCTCAGCAAAAAATGACAAAATCGATTATCTTATTGTTGGCCGCAACG GAACATCCAGCTACCCTGAGAATTTAAACAAAGTGACATTCAAAGACCCA AAGATGACTGTTATTGCTGAGGTAAGCGGAATTTCTATATCCATTTCCAT AGATCTTACAAAAATGAGAATAGGAATGCAATATTTAGACCACTTCAAGT AGACGCTCCTTAAAACATCATACCTCTTAAAACCTACAAAGTTGGATTTT GGGCTCTCTTAACCTCTAAACTTAATTTAATATCATATATAATTCACTTT TTTTAACCTCTTATAAATGCACTTTCATAAAATACCTAATTTCGAGAATT TCAATTATCGCAAAGCGTCGTAAAATTCGAGGTTATTCAAAATTATATCT ATACTTAAGGTATAAATAATCATTTTTTTTCTTCATGGCTTTACCTCAAA CAAATCGTAAGGCCCTCAAAGTTCTATTTTGGCTCATTTTTATGGTAGTG GCCAAAAAAATCTGAAAGTCAACTTTCTCTAAACATGGTCATATTGCATA CCAAAATGTCACAAATTTGATGGAAATTTAAAAAAACATTATTACCAGAC ATCAAAAATGAAGTCAATAAAAGTTTTGACCCTTCAAAGCCGTTTTTTGA TAAAAAAAACAGACGCAATTGCATTATAGGTATGAAATCCTGGAAAATAC AAATATTGTTTTGGGAATGGATTTTTAGCATGTATTTGTTCAATTGAATC ACGGTTTAGCACCAGAGGGTATTTTTAGGGTATCTTTAGCGTATTCGGGT ATTCTTATGATTTGGCCAAATTTCACACTGATATTCTTATTGAAAATATT CTTATAAAAAAGCGTGTACTCTCGAAAAATGTAATATTCTTTTCTTTTTT AGGTTAAACAATCATCGTACAGAAGATCAGATGCAGAGTCATTCTTGGGT CACACACCTCAATTGGCAAATGCCACGATCATCGAAAAACAAAGCTCGTC GGATGTTGCAAGCCTTAGAACAGGCTTTTCAAGCTTTTGGCAGTAGGACA CTTTTATACAGAGATATAAAGCGACTTTGATCAAACTACTCTAATAAATT TTGAGGAAATTACTGATAAAAAGTGGGTGAAATTCTTATCATATCATACA AATGACAACACTTTCGTCCGATTATTAGAAGTATCAATTGGTCGTAATAA GCGGAGAGAGCTCGTTAGTAATCTATTATACCATCAGCACTAATCTAATT TTTCAAAAATATTATCTTCATTTAAATTTTATATTATTTGAATTGAAGTT TTAGTAATATTCATGATATGCAACACTGGAGAGTCGTGACGTATTGGGTT GAACTTTTTGAAAATTCTCAGAAGACTCTCCAGTGTTGCATATCATGAAT ATGATTTCTAATTCATTTGATTAACCTGACATCTTAAATATATTATAAAT TTTGGAAATACTTTCTGTCTCTCAAAGACATTCTCTCATTCTCAATCTAA TGCCATGTTGCGATCAACAGTTTAAGAAACGTTTACTAGAAGATATCGCC TGGATTATCATTCTTCATGTTGTACAGTGCAGTCTCTATAATTCGAAACT CTCTAATAACTCGAATGTATCCTTAACTCGGACGAGTTTTCTGGTCCATT CAGTTAACAATTCCTCTATAATTCGAAATTTCCTTAATTTGCATTCCCGT GGGTGTTCGAGTTATAGAGACTCAGCTATAAAACTTTTTGAATAATAGTA CACCCCTGTGTCCCTAGCCCCACTGGAAAATTCGAAGAAAATTTCATCCC CACTGGGAAATTGACTTTAACTTGATCCCCATTCCATATTAAATGTTTGA AAATTGTACTTCAAAATCATCCGCGCGGTTTGCGCGCACCTATTGTTTTA TCTATTTTGTTGTGACTTGTATTGATTTTTAGTTCTTACAAAGTAAACAA GAGACAGTGCACAATATGAGCATAATTATTTTTCTTATAAACATCTACTT TATAAGAATGAAGTCAATAACTCTTGATAGACAGCCATATACCTTTCAGT AATTAGTCCTTACAAAGTAGNTCCCCACTGGGAAGTTGACTTTAACTTGA TCCCCATTCCATATTAAATGTTTGAAAATTGTACTTCAAAATCATCCGCG CGGTTTGCGCGCACCTATTGTTTTATCTATTTTGTTGTGACTTGTATTGA TTTTTAGTTCTTACAAAGTAAACAAGAGACAGTGCACAATATGAGCATAA TTATTTTTCTTATAAACATCTACTTTATAAGAATGAAGTCAATAACTCTT GATAGACAGCCATATACCTTTCAGTAATTAGTCCTTACAAAGTAGACAAG GGACAGTGCATAATATGAGCATAATCATTTTTCTTATAAGCATCTACTTT ATAAGAATGAAGTCAATAACTCTTGATAGACAGCCATATACATTTCAGTA ATTAGTCCTTACAAAGTAGACAAGGGACAGTGCATAATATGAGCATAATT ATTTTTCTTATAAGCATTTACTTTATAAGAATCAAATCAATACCTCTTGA TAGACAGCCATATACCTTTCAGTAATTAGTTCTTACAAAGTATACAAAGG ATGGCGTACAATATGAGCATATTTATTTTTATTATAAGAATCTTCTTTAT AAGAATCAAGTCAATAACTCTTGATAAACAGGCATATACCTTTCGATAAT TAGTTCCTACAAAGTGAACAAGGGATATCAAGATATTTTACTGCTGTGCG CTAAGCTGTACACCTCGTTTCGTTTTTATCAGCTAATCAGAGAGAAGAAA AATATTTGACTTTTGTGTTTGATTTTTCTTGTGTAAAAATATTTTTGATA TTGTGCTGCGCATAATGGTTTCAAAGGAACGAGACAAGCGCTATGGAATA GAAATCATTAGCTGTGCGCTTTTTTAATGGCGCTATGAAGGCGTTGGCGG GGCATTCATAGCGAGAAATACTTGCTAGTTCTTATGGATAAAGATTCAAA TTTTGAGGCGAAAATTATTTTTGTGAAAATCTGGTACTCTACTTTCATGC GAAAAAATCAGGAAAAATTAATGATCCAGTCTTCAACAAAGTTCAAAAAA CCTTACGGCTATTTTTTAGCCGTTTTTTGGCTGCACTTTGCCCCCAAAAT CGGGCTCCGTTACATTCGAGGATTTATAGTTAGGCGCCTTTGTACAAAAA AATCACAAGGAACGAATGAGCCAATCTCGAGAAAAGCTAATATTACCTAA GTAATTGGTAATGTGTTTATAATAAAATATCTTCAAAATCAAGCCTTCAT GAGCAAAAGAAATATCTATCCCATCAAAAAATTGATCAATTTGGTTAAGA ACATCGATGTATGCTTATAAATAGTGATTCTTATAGATAAAGATGCGTTT TTTGAGCCGAAAAGCTTTTTGGGAAAATCTGCTAGAACCATCTTTTACCT ATGATGTTACCCTACTTTCATGCAAAATCAAAAATATCAAAAAAAATTAG AATATTTCACTAAGTCCAAAAAACCCTTTTTTAAGCCGTTTATTGGCTGA AATTTTTCCGAAAATCGGGCTCCGTCACATTTTGAGAATTGCCATTTTGC ATCATTGTGCAAACAATCAGAAAAAACTAATGAGACAAGCTCATAACGAA CGAACGAACGGACAAACGGACGGACAACAGTTAATTTATGAGACCTCAAC CGGGGTAGGTCAAAAAAGTAAAAGTAAAAGTAATTGTGTACTGTAGTAGG AAATGTAAAAACAGAAGGAGTTTAATGAAAATAGACTCAAGAAATACATT AATTCAAATTAAAATTAAAACCATGATGCTTTGCAGAGGAATAAGACAGT AAAAAAGATGCATCAAAAGTCTTTTAATAAGATAATCTGTTGGATTGAAA TTCGATTTGAAATAATTAATACCAGTGAGACAAATATAAAGTTCTTGAAA GACAAAATTATTCTAAATCAAATTCTAAATCTTACCTTTATATTCTTTTA AGGGTTATTTCTTTTGAAAAGCGAGGATAATAGGATATCTTAATAACGTT CATTACAAAACCTAATTTGTATGTTTTGTGAGAAAGTTTTTTTGGGACCT AACACTGTGAATTCGATAAAGGCGTCTATTTAAAAATCTTTTATTCTACA GTATTGTTTGTAGTTTTGATACCAATATATATCTTTTGTACAAAAAGACC TCAAACAGTGATATTTTATGAATGGTAGGGTGTTTATATTAGAATTATTT GCACATTTAGTAATTAAAATCTTATTCATAAGTTATCTATTACACCCCTG TCTCGGATGAAAGGAGCTATCGTGAACGCTTTAGGGTTACCCAAAGTCAG CAAAAGAAAAAACTAAAAAAATCCCCGGTGGATATGTCATTGAATATGGT ATAATACTAAGGCTGGTCATAGCCAATTATTCAAAGATTGAACGAAGCAA CTTCAGCTATATGCCCAAATCAGGTTGCTTACAAAAAATACGTAAAATCA ATAGAATTGAAAGATTAAGCAGAACCTTAGATGAAGGTTTTTAGAACAAG CTTTCTAATGATAGAGTATACAGCACAAAACACGTACAAACACGATGTGT ATTTTCTAGTAAGATCTGTGCAAGCAGGTGCAGTAATCGTTAAGACAAGA AAAGTTTTGTTTTGAGTAGTGTTTGGAGAGAAGGAAGGCTGATTGAAATC TCAACCAAAATGGGTCCCAAATTTGATTTCTTGTCACTAAATGTTGGCAT CAAAACTGGAAGTAAGTCCGATGAGCAGAAAAAATTCAAAAAAGAAAACA ATTTTAGCAGCAAAGCAGATGCAAAACGTTACTTTTACCTGGAAAAGATT CATGAGGAACAACCGGACATCGTTTGTTTACAAGAGCAAATTCCGAAAGA CGAAAAGGAGATAATCAATAAAACTTACACATTTTACGAGTCCTACAGTT CTGATAAACAAAGTGCCGTCCTAGTTAAAAGTAGTCTTATCTCTAAAGAT TCGATTCAGCACGTCAAGTTTAACGATTCCGATACTAAAGAATATTCGGA AATTCGAGCTCGCCTGGTATTGGTAAAATTCACTCCAAAAGAATTAAACC ATCCTATTTATGTAGGATCGTGGCATGGGCCTTGGACTGGGAAATCAAAA ACCGAGAAACAAGGGTATGTAGAGGCGATACTCAAGGTAGTCAAAGAATA TGCTGAAGATAATCCTTTTTTCATTGCTGGAGATTTCAACCTCAAACATA GTGATCTTCCAAAATTGCCAGATAATTGCTACAGTATCTCAGCTGACGCT GACAACATAGATTATTTGGTTATTGGTTGTGTAGGGGCAAAAGAACCGTC ACAGGCGCAAAACAAAGTCACTTTCAAGGACAAGAAGAGACAAGTATCTG CAGAGGTTGGTAAATTTTTATTATAACGTCAAACATAAATAACATAAACT TTTCTCTACCATGCCAGAAACAAAAGTTTTGTGTTGAGTAGTGTTTGACA AAAAAAACAGACGCAATTGCATTATGGTATATCCTGAAAAGTACAAATAT TGTTTTGGGAATGGATTTCTAGTATATTTGATCAACTGAATCACGGTTCA ACGCCAGAATTGCAGGGTATTCTTATGATTTGGCCAATTTTCACACTGAT ATTCTTATTGAAGATATTCTTATAAAAAAGCGTGTACTCTCGAAAAATGT AATATTCTTTTCTTTTTTAGGTTAGAGAATCCGGGTACAAAAGATCAGAT GCAGAGTCATTCTTGGGTCACACACCTCAATTGGCAAATGTCACGATCAC CGAAAAACAAAGCTCGTCGGATGTTGCAAGCCTTAGAACAGGCTTTTCAA GCTTTTTTTCCACCCAGAACATTGTTATATCTATTGCAGCATCCCTTTTT GTATTTTTGATTTTAAAGAAAAATCGTTAAATTTTTTTGGCAGTAAGGCA CTTTTAAGGCCGGTCTCCACTTGCGCACGCTGCGATGGCACTTTGTCAAG CAAAGCTACCACGCTATTGGTCAAAGGAAAAATGAAGCAATTCCATCGGC GTGATCCGACGTAACGGTTGAAAAAAGTTGAAATGTGTTCAACTTTTTCT TCGAGCGCGCGCTACATTTTAATGACGTAATCTTTTTTCCAAGCAAAAAG GATTGAAGGCAAAAGGTGCGATCGCACCGCGCACAAGTGGAGCCCTGCCT TTATACAGAAAAATAAAGCGACTTTCGAAACTTTGATCAAACTACTCTGA TCAATTTTGTTGAAATTACTGATAACAAGTGATACTTTTATGGACCTACC TGGTTATGCATTTAACACATATATAATTGATATCTACGTGAGCATGAACG TTATAAACTATCATTCAGAACACAAATAGTGACGATTTATTAAAATTAGT CGTTTGTTTCTTATAAAAAAAACGTTTAGAAACCAAAATTTCATGCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00029782TCONS_00029782Clytia hemisphaericatranscript
TCONS_00029781TCONS_00029781Clytia hemisphaericatranscript
TCONS_00029780TCONS_00029780Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00029781-proteinTCONS_00029781-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000769supercontigsc0000769:48120..55367 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.28 0.28 0.73 0.36 0.55 0.45 1.41 1.11 5.4 9.4 6.27 4.63 19.33 15.92 36.08 20.38 8.88 12.12 59.82 56.31 2.81 2.46 2.84 3.15 32.05 53.22 2.07 2.55 9.9 4.92