XLOC_016778 (gene) - C. hemisphaerica

Overview
NameXLOC_016778
Unique NameXLOC_016778
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000747:59369..68060-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016778 ID=XLOC_016778|Name=XLOC_016778|organism=Clytia hemisphaerica|type=gene|length=8692bp|location=Sequence derived from alignment at sc0000747:59369..68060- (Clytia hemisphaerica)
TAAATTAAAGAAGAAATAGTAAGTATTTACTTTCATATTTGCTTAGCAGC
TCTGCTCCTCAGAACTGTTTAAAGCCTGTTTTGCCCCTTCATACTCATTA
ATTGCACTGAATTTGATTGTGGCATTTTTTTTGCTTTTTTTTTTTTGCCC
TTCGGATTTATGCACTACGGGCCACTGAATTCTGTTGAGGCATCAGTTGT
GTACGTATCGACCAGCTTTAAAGAAACTCACTTGCATTGTCAGTGATTAC
AATACCAAACTGCATTGTCAGCTCTTACAAATATCTTATTTAGATACATT
AGAAAATATTTCAGTCTCAGAGATTTACATATAGTCTTTTAGTTTTGAAA
TGATATCCATTGAATCATACCGTGTGTCGATAGGAGGCTTTGCCTACATA
GCTCAGAGAAATGTGAAGTCAATTTCTAAGTCCATTTTTATCGGCTCCAA
ATTTTCTAAAAATGCTTTTTCTCGATCATTGAAACCCGTTAGATTCATAG
CACTTTTTACACTTTTAGTTTTTGCAATCCCTAAGTCTTACGAAACAATT
GAAATTCAAACACCTCTTAACCTCGTGCATTTTTCAAAGAATGGAATGTT
TGTTCAGTATCCAAATCTAGGGTATAATTTACCAGAGCCAGTTCTGTTTA
CTTTTAAAGTCAACTATACATTACTATTGTCAGGTGATATAGAACTTAAT
CCAGGTCCACCACAGGAAGAGATAAAAAGTATTTAAGGTTCTTTTCATCA
AGGAAATTCAAAGTTTGGCCAGACTGCTGGTATACAATGTTCGGGCAATT
GTTTTTTTGCCATTTGCTATGCACAGCTTAGAAAATTATCACTTTGGAAG
ACTCATGATTTGGATTATGTTTTAAATCAAGGGGATCTAAATTTTTAAAA
TCTTGGCATCACTAGACAATCACCATTAATTGAAGAATTCCAGAAAGTTA
TTGCAGTTGGAAATATCTGTTCACTAGATTTCAATATCGTTGAAGGATAT
TTGGAAAACGAAGGTATTTCAGTAAATTTTGTTAATGAAGAACTTTTGTT
GCAACATTCTGGTGCCGTCTTAGTAATAGCTGGAAATTGTTTAGGTGTGC
TCCATTACAATGAAAAATATTTTGTTTTTGATTACCATAGTAGAGATGTA
AAGGGCCCTCAAGTTCCTGGTGAAATCGGTGCGTCAGTACTTTTGCAGTT
TGGAAATATTACTGAAATAAAGAATTACATAAGATCTGAGTATAGGGCAA
ATTTGTTTAATGTCATTTATTTGAAAACCAATTTTCACGCATACGAAAAT
ACCAAAAGGGTGATTTCTAAAGATGTACTATGTTGGCAAAAAAAGCTTCG
CGTAAAAGAAGGTTTGAAGAACTTAGAGGTAGTGAAAAACACGAACACCA
AAAAGAAACGATGCGCAAAACTGCAAAATCTTTACGTGAATTGAATAAAG
GATCAGAAAAACATGAACAGCAAAAAGAAAAGATGCGGCAAGTTGCAAAA
TCCTCTTACATTAACAACAAAAAACTTAATTCAGGAAAAAGGGTTGAGAA
CTTCAAGCAGAAAAAACAGGAGGGTCCTTCTTACATCTGTGTAATGTGTA
ACCGCAGTATGTTTAAAAAATCTGTGTCTGGTTTTTATGAACAAAAGTAC
TCATTGATCAACTTTGAAGAAATAGAAAATTTTAATCCTGTAACCTCGTT
CGATGGTAACTTCCATGTATGCACAACCTGTCATAGAAAATTAATGAAGG
GAGAAATCCCATGTCAGTCTATTACTAACAAGCTTCAAATTTTTGATCTC
CCAGATAATCTAAAACTTCTAAATGATATACGAAAACTGAAAAGAATTTT
AGTGGCTCAAAGAATTTTATTTTCTAAAGTTATGATAATGCGTAAAGGAG
AATTCCCTAAATTGCAAGGTGTAATATGCAATGTCCCCATTGAAACACCA
GGTGTATGCAAAGTACTTCCTAGAGGAAGTGATAGTAGTGGTGTAATAAA
TGTTGAATTAAAAAGAAAGATATCCTAGCTACAAAAACCCTGTTATTTCT
CAGCAAGCAAGACGACAAAAAGTTTTTGAAACTTTGGACTTTTTAGTGAA
TAATAATCCTTTGTATCATGATATAGATATTGATATGTCAATCATCGACC
AAGTAACTAATGATGAATATGTTGAAAGGGTTTCATCAAATAATAATTCC
GTATCAAGCGCTTCTTCCAATGATATAAGATTTGTTGATGATACAACAGT
TACTTTAATTAAGCCTTTTGAAGAGCAATTAGAGAATGAATTTGATTCTG
ATGATCCACTCAGTGTGTATCGAACACCAACATGTGAAACGGTTATTGTA
TCAGAAGTGCCAAACATTATTTTAGATGACGAAAATGCAATTTTAGCTCC
AGGTAAAGGTCAAACCCCCAATTCATTAACACAAGATGAGTTCTGTGAAG
AGCTAGCCTATCCTCATCTTTTTCCTACTGGGAAATTTGGTTATAACGTA
GAGCGAGATATAAAATTGTCGCCAACAAAGTACTTTAATTAGCGTCTTTT
AAATTACACTCAAAAGTTTGCTTTGGATTCAGATAACATTTTTTTGCTCA
CAAAACTTTACTGCAGCTTAATCTTAGAAGTAAGATCAATATTGCAATGA
GAATTTCAAATTCCAACTTGACTGCAGAACTGTTAACAAATAATTTTAAT
GATACAATTCAAAATTGTGTAGCATCTGATAATGCATACAAGTTTATAAG
TACTATAAAAGTAACCCCTGCATACTGGCAACATATTTTATCTGATGTTC
TTGCAATGGTTAAACAACTTGGTGTCCCAGCATACTTTATGACTCTCTCT
TGTGCAGATTTACGATGGGAGGAATTTGTTACTATTATCAGACAATTAAG
CGGGGATGCTGATACTGATCATGAACTTCTTGATTACCAATCTAGATGTG
CCCTACTTAATAGCAATCCTGTTGTGCTTGTGCGTCAATATCAATATAGA
AAAGAGTTGTTTTTCAAAGAGATTATAATGGACGGCCAACTTGGAAAAAT
TTCATACTATATGCTAAAGATGTCCCAAAACTTGAAGAACGGAAAAGAAA
AGTATATTGATCACATAGATAGTGTTATTTCTGCTAATGTTCCTGATAGA
GAAGAAAGTCCTGAGTTATGGAATTTAGTCAATAAATATCAAATAAACTC
CCATTCAAGATTGTGTAGTAAATATCGCAAAAATGAATGCCGATTTCAAT
TTGGAAAACTTTTCTGCAAGCGTACTATTTTGTCTGAACCGCTTCCTGAA
GGGTTACCTGAAACTGAAAAACATGACATTTTGGTTGCTAGAAATAATGT
GATCCAAACTGTTCAAGAATTTATAGATATAAATTTGAATCCTAAAAAGA
GAAACATTTTGGATCCTGATAAGCCTGAGTATATTGAAATTGGATCTATT
GATACAATTTTGTCTTCTTTAGGGTTAAATTATGAAACGTATGAATATTA
CTTATCAATCTCACCAGACAAAGATCAGCATTTGTTTCTAAAACGTGACC
CATATTCTTGTTTTGTCGACAATTATTTTGCAGAAGGCCTCCTAGCATGG
GAGGCCAACATCGATATCCAACCAGTGTTTAATGCATACAGGGCAGTTAC
ATACATGTGTGCCTATTCTCAACTTCAGTTCAGAAGCAGCCAACGAGCCC
ATTTTCCTGAAATATCTGTTCCCTTTTCCAGGAGAGAGTGTTTTTTGTAA
AATGGGGAAACAGATCCGATTTTCTAGGAAAAACTTTTTCTTTAAAACTA
TCTGTTTCCCCGCTCCAGCTGATGACGTCATTAGAGAGAAACAGATCAAT
ATTTCTAGGAGATGAAATAATAAATTGGGAAACAGATATCTGTTTCCAAA
AAAGATGATATTGCATTGGAAACAGATTAAATTTTCTGGGGGAAAACAGA
TATCAATCACAAAAACCAAGGGAAACAGATAGAAATTTCCAGGAGAGGAA
AACAGATATCCTATCCTTATAAGGTTGGGAGAACAGATCAAAATTTTAAT
TCTGAAAATTGTGGAAACAGACCAAATTTTCTAGGGAAGATACTTTGAGA
TTAAAAATTTAGGTTTTGAGGAGAAACAGATCTTCATTTTTAGGAATAAG
AATTTTGAAACTTTTGGCCAACAGATCAAATTTTCCAGGAAGGCTATGTC
TGGGAAACAGATGTTTAAAAAAAGGTCCTCGCTGGATGCTTTCGTCAGTT
GAGCTACAATCTGACAATGTCTGTGTGTCTGTCTGTGTGTGTGTGTCTGT
CTGTCACAAAAACTTTAGGGCAGCCTGGAGACTTCAAAAATGCTTCGATT
TGGCTGAAATTTGGCACACTTGTTCCTTGGGTGAATATCTGGGGGTGTTA
TTTTCATTTTTTAAAAATTTTGATTTTTGGGGCCTGGGACGAGTTTTTCG
TCAAAACGAGGCTAAAACTTTGGGGAAGCCTGGAGACTTTAGAAATGGTC
AGATTTGGCTGAAATTTGGCACACTTGTTCCTTCGGTGAATATCTGGGGG
TATTTTTTTTATTTTTTGAAAATTTTGATTTTTGGGGCCTAGGGGCGAGT
TTTTCGTCAAAACGAGGCTAAAACTTTGGGGCAGCCTGGAGACTTCAAAA
ATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCC
TTGGGTGAATATCTGGGGTTCTACAATTGGGCCTATGAATAGTTTGAAGG
CACTGAAGTTGAGCCCAGTGCGTTGCGCACGTTCGACTATTTTTCAAAAA
GTGAAGATAAGTGTTCAACTGCAATGCAAGAAGCATTGAAGCAGGCCAAA
GATTCAAATGACAGTCAGTTTGAGCAAATGTCTAAAANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
TTTCAAGTCAAAAGAAGAAATTGAGGAATTGCCTGAGGATTCTGATGATC
TTTTCAAACGAAATATGTTAAACAGATATATTGACCGCCCAAACACAGGA
AAATTTAATACTATGTGTTATGCCACATTCTGTTCAAACTATACATTAGA
CACAAGAAAAAATACAAATGATGAAAATGATTGGCAGCCTACTGTACTAG
ATGATTCAACAAGTGCAGTGAATCATGAAGAACCCCAAACACTTCCAAAA
TCAGCCAAATTACTCAACAGTAAGGAAAAACTCAAGCTTCGTAAAGTTCC
AAAGGTTTTGATGTACTACACTCCTAACAAAAATAAACAGCCAGAAAAAT
TTTCCCACAATATTCTCATGTTGTTTTACCCATTTAGATCAGAAGAAAAT
GATTTGAAACTTGATGGTTCATATGTACTGAAGCTCAATTTAGACGAAGT
CAATGCAGTTGTACACCAGAACAAGCAAACTTTTGAACCTGATAGTCATC
TTGTTGATTTAGTACTTCAAAACTATCGCAATGACCTTATGCATAATCAA
GATGCCTTTGCTCAACAAGAAAATGATGAAGTGCAAGATTTAATGAGCAA
CTCATCAGACAGTGAAAATGATGATGAAAGTCATGATATCAAGCAAAACT
TTGCACCATTTACTCAAACAGTGCATGGCTTGCAAACTGATGACCAAATC
AATACCCATATATAAGATCTTTAAATTCTAAGCAAAGAGATATTTTTGAT
GTAGTACTAAATTGGGGGAAATGTATGTGCAAAATTCCAAGTCCAATAAT
CCTTTACTACTAGAACCATTGAGAATATTTTTAACAGGTGGTGCGGGCGT
AGGAAAATCTCATCTAATTAAATGTATTTACAATTGTTTTTCAAAAGTCC
TAGCATATAAAAGTGACGAGCTAGAGAAGCCACGTATTATTAAATTGGCT
CCAACTGGTATAGCAGCTTTCAATATATCTGGCACCACAGTACACACAGG
ATTGAGTATTCCAGTTGGAAAATTCAGAAATATGGCTGACAAACAAAGGA
CTACCATTAGAAATAATTTACATCATGTAAAATTGATAATAATTGTTGAA
ATATCTATGATTTCATCGCAACAGCTTTTGAACATCCATACAAGATTATG
TGAAATTTTTGGTGTAAATGACAACACACCATTCGCAGGGAAAAGTATCT
TTGTTTGGGGAGACCTCTTTCAATTACCCCCAATATTTCAAAGTCCAGTA
TTTTCAACTGAGGGACCTATTATTGGTGCATTCAAATTATGGCACCTATT
CAAACTAGCTGAATTAGATGTGATTATGCGTCAAAAGGATGACTCTGACT
TCATTGATCTCTTGAACAATGTAAGAGTAGGTGAATTGGATAGTAATGAT
GAAAGTATGATTAAATCTAGACTGTTAACACGAGAACACCCTGATTATCC
AATAGAATCATTGCATTTGTTTGCAGAAAATGCTTCACTCCATCTTCACA
ATATTCAAAGATTAGATACTCTGTCTTCGGAAACAATAAGTGTAGAAGCT
ATCGACGTTTATCCAAGGGGTGTTACTGAATCTCAAATTACCAAGGTTAA
GAACCTGCCACTTAACGATACAGGTGGCTTATCAGTTCTATTTGATTTGA
AAATAGGAGCAAGAGTAATGCTAATTAGTAATATTGATATAGAGGATAGG
TTGATCAATGGTCAATTTGGAACCGTCACTGACGTAAAATTCAGAAACAA
TAAAGCAGAGCTATTTTATGTTAAACTAGATGATAAGACGGCTGGAATAA
AAGCTCAAAGTAAAGACTAATATGCTAAGGCCACTGAAACTGTTCCCATT
GAAAAGAGTGAGGTAAATTTTCCCTTTGACAAAAAACCAATACACTTCAC
CTATCATTTCTCGGACACAATTTCCTCTTAAGCTAGCTTATGCTTGCACA
GTGCACAAAGTTCAAGGATTGACTTTGGATTCAGTAGTCGTTAGTTTTGA
CCTTGCAAGGCAAAGAAAGTTCAATGCTGGTTAAATGTATGTTGCAATGA
GCAGAGTGAAAGATTTAAATGGTTTGTGCTTTACTGGTCAATATCGACGT
AGTGCTTTTGTCTGTAGTGATAAAGTTAGTGAAGAATACACACGATTCCG
TCAGAACAAAGTTGAAAGAGTTGCAGATATGATGAGGTGCAGTTGTAATT
TAAATGTTTGCCTATTGAATGTAAGATCTTTAAAACGACATGCAGTTGAT
ATTCAAAAGGACAGATTTTTGTATGAAATGATTTGTCTGACACAGATGAG
TTATGAGCATTCTGAGGAAGACAAACAAAGTATTCATGAAAAGCTTCCTT
ATTATATGGGGCCCCCAGCGGTTTGCGTGATTGCGTGAATGGGCATTTTT
GGCTGCGTGAATGCGTGAAAATTGAAAAAAAATGCGTGAATATGTGAATT
AAAAAAACTTGCGTGAACGTGAAAATGTACTTTTTGATTGCGTGAATGCG
TGAATCTGGGCTATTTTGTGCGTGAATATGTGAATTTCCCCTTTTTTCCA
CCAATTATGTGCATTTTTCCCGATTTTCGAATGTTTCCCCGATTTTTCAC
AAAAAAACTTTCCGATTTCTGAAAAATCGGGTTATTGCGTGAATTTCGAA
ATAAAATTGCGTGATTGCGTGAATTGAGGATCCGCTGGGAGGCCTCTTAT
ATTCTAGTCATAATATTGACCAGCATAAATTCAACAGTGTTACTGTCTGT
CATTCTCCTTCTTTTATTGACATTGATGAGTATGATCATTCATCATGCTT
TTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNCATCATGCTTTTCTCTTGTAAAATTTAGAAAAGCTGAAT
TTACTGAAAAGGAATTTTGTGTTTTGGTTCTCTATAAAAGTTCAAGAATT
CAACGTGATGTGTTTTGTTACAATCTTGCTCAATTTATTGAAAGATACAC
AATTGATATCATATTGTAGGAGACTTCAACATGGACGGCTTTGAAATGGA
GCATGATCAATTGTTGGCTGACATTCTCCAAGATTATGATTTAGTTCCGA
ACTTTCCAACACATATCGATGGGAAAATGCTTGATCAAATTTGGACACAT
AAGGAATTGGTGCACGAATATGGTATTGAAGTTATTCGTAGATGTATGAA
CTTATCCGATCATGATGGAATCAAATTATCGCTGACTTTGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00029404TCONS_00029404Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000747supercontigsc0000747:59369..68060 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.41	0	2.28	0	0	0	0	0	32.2	48.25	28.25	30.99	42.3	23.07	38.78	39.84	23.54	24.59	44.68	55.95	7.25	17.62	5.04	19.43	0	0	24.97	22.25	34.06	40.29