XLOC_016209 (gene) - C. hemisphaerica

Overview


Name	XLOC_016209
Unique Name	XLOC_016209
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000692:16440..25163+

gene from alignment at sc0000692:16440..25163+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_016209 ID=XLOC_016209|Name=XLOC_016209|organism=Clytia hemisphaerica|type=gene|length=8724bp|location=Sequence derived from alignment at sc0000692:16440..25163+ (Clytia hemisphaerica)
CAATTGATGAGAGAAGTCCAGAAAAATAAACAGTTACAACAAGACCTTCG
GAATGTCGATGATATACACCGCAATcttgaaaatgtcaaatttcaactTA
ACCAGgttatacacttttttataaggatagCGTTTATTAGTATACTGAGA
CTTGAATTAGCAAAAAAGAAGCATAATTCTAAGCATAGCACGAAACTGGG
AAAAATACattattcaaattttgttttgaaaatgggaTGAATGATCAATG
AGACAGAAATGTAGACAGCGAATATTTTGACACATTGAACAAGTGATCGT
TAATATAAAGCGCTGTAAAGCGTAAAAGTATGAACAATTATCGTGTTTGG
GCCACTGAGACAGGGTAGTTGACAACGAATAATTTGACTTAATTGTCACT
TTGAAACAAGGATCTGTAAAACATAAATAATATGAACAATTATCGTTTTG
ACAAGCTGAAgtaaaagtgaaaatgaaaatcaaccaaaattgacgatgtt
ttgaaaaaactttcataagcATTTGCTGAAAAAGAAGTTTTGCTAAGTAT
GATGAGCCTCAGCACGAATTTTCCGTATGCTTATAGAGCAAAATTAGTAT
TGATTCTAGAATCTGCTAAGTTGAAGttcaatcatggacaaaaggttgta
gacaaatgaaatttcagtaaaaaaatgatgagaaatagtgtaaaatgact
cttcaatgtgtctgaaaggggaggaaagttaagaaaaacacttttgaagt
cgttgcattgcttttcaattgcttttgagagaaccacaagcaaaaaatca
gcgttttgatactggtgtaagccagttaattaaaaaccttttgtccatgg
tTGTTGTATGGATTCTGTTCGAGATTCGGCCATTACTCTTCCGTGCTTGG
Gggtataggggggggggggggggagagaggggggggggggggggtgcggg
gggggggggggggagagaggggggggggggggggtgcggggggggggggg
gggagagaggggggggggggggggtgcggggggggggggggggagagagg
ggggggggggggggtgcggggggggggggggggagagagggggggggggg
gggaacttttaaataaaaacggGGTGTCATAATTACGTGATATTGAATTG
ATTTTAGTGAATTTCCCTAGGAAGATGAAggtttttgatactttttttgg
CAAGTCATTAAAGTCATTAAAATGGTGTCATTATAAAGTGTTTTTGGgtt
gaaaaaatagaaaaaattaaaattaacacccccctacaattaagcacaga
agaggACGTTTTCTGATCTTTTTGAAGCACAGTAATTTGaatatttgatt
gattttaatTGAAGTCATTTTCAATCGATTTGCTATAAAATCATTATCTA
TAGTACACCTTTTTTTTAGAAGAACAAtttaataagaacaatgagACTCA
AAATCACCaacaaataagaacaatttaagaaccgatcctgaaattactca
attttaagcaatttaggggtcaaattagtaaaataacgcctaaaatacct
caattacatcCTATGAATAAGAACAGGATGAGAACAATCTGAGgctcaaa
atgccaaaaaagtaagaacagccgagcctcagaaaaattttactggttct
tataaaaaaagtgtaagtcACATAGACTGACAAACTTCTTTTTGCGCTAC
ATTTTCAGCACCAGAAGCTTTTCAAAAGTTTGGCAATCGAACTTTTCGAA
GAATGCACAAAAATGTCGGTCATCAAAGGCTCATCACCGAAGTCACCAAA
GTAAGTATCTCAATATGATTTTATTTGTCTCTTTTATCGTGGAAGTAACC
TCAGATACATGCTCAAACTTTCACTCGCCTTCAAACTGAATAAACGGaac
ccaaaaatctaaattcatcatcaaaatttctcaaatataaatgtgaaaaa
gttcATAGAATCTcttccaactatcttctttcaggagattaaAAATAGTT
GGtcagaaattcttatttttttacgtGTGCAATCTTTAATAATCGATCCA
AAGATTCGTTTTTCGTTAGGTACCTACCTGTAGGTAGAGGAGCGTGTCGC
TCTTCCTTTATGTGTTAATTGTTGacgtttctttttttaagaaaggtaCG
CGATATTCCTTTTCGTTTCACAGGTTAACTTGTTCATCTTCACCAGGGGA
CAAAGAACAGACGAATAtcttggtgaatgcaatggtaaCTTCTATTTCTC
TCTTTCTTTCTCTTCTCTCTCTTTTACCGTGGCTGATATGGGCATCCCTG
CGCCTATCTTGCCGCGGCGGTGTaagttaggcggccgcctaacttAGCGA
TGGATTAACTCGGGCGGCCGCCCAACCTAACTTAGGCGTCCGCCTAATTA
GTCAATCTTGCTGATCTATTCTGGTCTGTATTTTTATCATATCAATTCAG
GCGGCCACCAGTTTTATCATTTCAAATTTCAAAACAAACAAAAAATATGG
TAGCCATTTTCCTTTTGCTTGCTTTTGAAATTCCTCTGCAACTTGATACa
ccattttggtatttttgtttactttattaACACGTGCAACAGAAGATAGG
TGGCCAACTCAGGTGGCCGCCtaagatttaacaagttaggCGGCCGCCTG
AATTAGAATAGGCGGCCGCCTATATCAACTCAAGCGGCCGCCtaagattt
aacaagttaggcggccgcctaagaTTCAAATATAAAATGTAGACCAGAAA
GCTAATTTGATGACCATCCATCGATaagttaggcggccgcctaagaTGAC
AGGCGGCCGTCTGACTTGAACCGCCGCGGCAAGATAGGCGCACGGTACTC
TTTCGATAGAATATTTTACGCTTGGTCTGTAAGCTTAACGGAAGACTGAA
TTTTGCTAGCACTAATTCAAACTGTCGACTTTTTTGTCTTACTTCCGTTG
GGTGTGAAAGACtgttgaaaattgactgaaaaTTGATATCGATGTAACTA
ATTAATCGATGTAAGCCTTTCTCTTGTTTCAGAAAACCTTCAAGGAAAAC
TTCGATGACTTTAGATCGTACACTATATCCatccaagaaaaattgaaggT
AAATGAAATTCTTCAAGTCCCTCCCAAAGCTTTGTCCCAAAAAATATTAT
AGCtgcaaaaaatcgcaatgaGATAACATTTATGAGAAGATTTTTATGcg
tcattcattcattcatttctgCCAAGTCAATGAGACAGGGATGATATATT
GTTCATTGTATCCTTTATTTTTAGACGCAATCTTCCCTGGAGCTTTCACA
ATCACCTTCCGCCAACAATTCATCACCTACAACCTCCATTTCAAACAAAT
TATTACGTCATCTACAGAATCGTGTACAACAATTACGTCAAGAAAATATT
CAATTGAAAGAGAATTTAAAGAACTCCTCGTTAACGGTAAGTCATTTGAC
GTTATCTATTGCCCATTTTTCATGATATGGTGTTTTAAGATGTTTTTTCg
tggatatttttttcgaagGAACCTGCTTCGAATGTCAGTTGAAACCTATC
TTCTCTCGATGAAAAGATGTGTCTTTCCGAACTTTAACCTGAATGTATTT
TCCAACTCCGTTGCTATCATCCGTCATCTCCGTTTATTCTCATAAAGTTA
CTGTAAAGACAGGGATTTAAAACTGCCCGTACATTGTTCCCTGGACAATG
ACTTTGATACAACACGTGTGAAAATGTGTTAACAAATCCTTTTTTGTCTC
AAATAGTACTGAGTTTATGAATGTGTGTTATTCTTCTACGGAAATGGTTA
GCTTTTGCTAAAGTTTTGgttttccaaatcgctttagcTCAGACACTTTA
CTGTCCTTAAAAGTGCAAATGCATAAACTCACTATTGCGAAAAAGATAGT
GTCCTTTTAGCTCATTCTTCTTGTAAGTTTGAGGATTTTGCCTGTTAAGA
TCTTTTCTTCGATGCGATTGTACTCAAATATTACTTTCTCGTTAAAGATC
AGCATTCTGGTTTCAATTGATTATTTATCAAAATACTTAAACTGATCTTT
AGGTCTTCGATACAAGTGATATAACGAGGCGAGTAGAAGATTTGGAATGT
CAACTTCAGGTAAGAATTATAACCGTCAAATATCACGATTGGTCACGTGG
AAATAGTTCTTCTTTTTATTAGGGCAATTAGTTATGACTACCAAGAAGCA
AAAGAGCTCAACCGACTGTTGAGAAAATCTAGTTTAAGATCCCAGAATTT
CctgatttcaaagccccgaaaGGTCTATATTTGAAACTCTTGTATAGTAA
ATGAGGCCACTAATTAAATAGTTCTTCTTTTATTGCTGGGCATTTTGCAt
gcagtctgttcctctaaaggatcctgcattgtaaTACGCTCGCATGCGTA
TTTTGTTGTTCTTTTAGACcgcatgtagttaattcccgtgataaacgaaG
GGGaatggtacagtcactttcggtcggggttgtggatggcgNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
tattccaaatcgctttagcTCAGACACTTTACTGTCCTTAAAAGTGCAAA
TGCATAAACTCACTATTGCGAAAAAGATAGTGTCCTTTTAGCTCATTCTT
CTTGTAAGTTTGAGGATTTTGCCTGTTAAGATCTTTTCTTCGATGCGATT
GTACTCAAATATTACTTTCTCGTTAAAGATCAGCATTCTAGTTTCAATTG
ATTATTTATCAAAATACTTAAACTGATCTTTAGGTCTTCGATACAAGTGA
TATAACGAGGCGAGTAGAAGATTTGGAATGTCAACTTCAGGTAAGAATTA
TAACCGTCAAATATCACGATTGGTCACGTGGAAATAGTTCTTCTTTTTAT
TAGGGCAATTAGTTATGACTACCAAGAAGCAAAAGAGCTCAACCGACTGT
TGAGAAAATCTAGTTTAAGATCCCAGAATTTCctgatttcaaagccccga
aaGGTCTATATTTGAAACTCTTGTTTGAGGCCACTAATTAAATAGTTCTT
CTTTTATTGCTGGGCATTTTGCAtgcagtctgttcctctaaaggatcctg
cattgtaatacgcatgcgtaatttgttgttcttttagaccacatgtagtt
aattcccgtgataaatgAAGGGGaatggtacagtcactttcggtcggggt
tgtcgatggcgaaatatgtcgttttttatgagatttttcgttctttttgt
ctatttttagtaatgcaggattctttagataaatgGTTCGCCCTGACTGT
TGAGAAGATGTAGTTTCGTCTCCCAAGagttttcagaaaagataatcaat
tttaaaCTCCATCTAGGCAGAGAAATGTAAAGGGATAGAAAAATAACTTC
TCTGATTACCAAAAGTGATCGTTTCTGCCCCCATGATGTATTTTAGAACG
TCAAACGTTGACCCTATGGTAATTTTACGATGTTTCCCTCAGGATTGTAG
TTGATTGCGACTAAAAATAATGTTGTTTTTCTCTCAGGACAAGGAAGTTA
AGATGAATGAGCAGCAAGCATTATTAGAATCGAAAATGTTGGAAGTGTTG
ACGCTACAACACGCTCTCAAACAGTCAACAAAGGTAATGACAATCAGTTA
TTTTCCATTAttaatacacgcttttctttataaaaatggtataaatccat
ttcattatggatattcttaacttttttgggaaaatacaTCATTCTTAGCG
GGAAATATTCCCGGAACGGGAAAGTGGAAAACTTCCCGAAACGGCTAGAT
TTTCCTAATCAGGAAGATCGGATGTTTCCTGGTCGGAAAAGTTGGCTTTG
AGCACCCCGGAAATGGTAGTGAAAAATAAATAGCTGACTTCTCTTGTAAA
GGAGGGAAAATAAATAACATTCATCTTCCTGATTTGACTTCTCGAATGGA
GCACTAAAAATCGGTGGAAAATTCAAGATTGCAGCCataaaaattgatca
aattagGAAGTTGTGTCCTTTTCAGGCAACACTACCTCCCCGTAAGGGAA
ATATTTCCCATTTGGGCGATACTTTTCATATCgatatactcttaggttcc
aaataaacgaccCCCCCNCCCCCCccctggaccttattaggacctgccat
ttattaatttttaagaatatgttcagcaggccccttattttgctctaaaa
agCCTGTTTTTAGCCTgcatttaccttatttttgggttttcagaagtaca
atttccacctcccccgtttatttggagtAGTGTTACCGACTGTATGTTAT
GGCTCAAAATAATGTCATTTATCATTCCACTTTTCTAGGAGCGTCTTCGC
CACGAGAAACAATATGCAGACACAATGGCCATCAACCATACAGATCAAAG
CCCGAACACGCTTTCTCATCATTTAAACGGTAATGACTTGACCTCTGAAA
TCTCTTGACGTGCGGCGGGAGGGAGGTAGACGTTATTTTTGTAGCTATGT
CTTGTTCTTTACTCGGTCTTAAAACTAGTGTGGTGGAAAAACTTGATATG
AAACTTACCTCCTTCGATCCatgctttttgttttttccaaTATAAAGCTA
TTTAGTATCATTGAGATGGTAGTAACAATATTCGAGCTTCTTGTTAGTAT
GTTTTGAAACGAAAAAGTGTCCGG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00028581	TCONS_00028581	Clytia hemisphaerica	transcript
TCONS_00028582	TCONS_00028582	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00028581-protein	TCONS_00028581-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000692	supercontig	sc0000692:16440..25163 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.98	4.93	1.98	1.26	16.81	10.98	8.17	8.42	6.37	5.13	4.05	5	2.62	3.25	4.04	3.32	7.73	5.56	1.56	2.83	3.05	3.55	7.13	6.43	9.28	7.8	2.79	1.58	4.32	6.76

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XLOC_016209 (gene) - C. hemisphaerica