XLOC_015958 (gene) - C. hemisphaerica

Overview
NameXLOC_015958
Unique NameXLOC_015958
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000670:27210..34345+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015958 ID=XLOC_015958|Name=XLOC_015958|organism=Clytia hemisphaerica|type=gene|length=7136bp|location=Sequence derived from alignment at sc0000670:27210..34345+ (Clytia hemisphaerica)
ATTTTAGAGAAATACTAAATATGAGCAGAAATCTTGCACCACTGGTATTC GTCCTTTTAGGATTTTTATCCCTGGCTTCATCAAGGATGTTTATCGGTGG TAAgtagaaaaaatgattttaatctcTATCATTGTCACACCCCCGCCCCC TCCCCCCCGTGTCCAAGACCTCCGcaccactggaaaatttggcaaaaatt ttatACCCGGTGCGAAAAGTTCCCTAAGATTCCAAACCCACTGGGAAATA AACACTATTCAAAattgaatttagaaaattagACACCTAAAATAgtatcc ccactggatttttcgagagaacaatataatttctatccccattgggctTT TCAATAGAAAACTCAAGGAGTTTCACTGGGACTGTAAGAGAAGAATGCAT TACCATTTATGTGGAAagtaaacttttcaattttgggGTTTTGTatacct tatcggtagaaaattTGTCGGTCAAAAATATTGCCGGTAAAAAATATTCG TCGGtaaaaaatttcatcacttggcaaaaatttcgtcactttttgccAAC GAATATTTTTGACCGACGAATTTCTTTTCCTTTATTGTTCTAAATTTCCC CTGCTGTACAGCATTTTTCTGTACTAAAGAGCtctaaaatgaaacaatat gtTCTATTCAATCCTTCCAAAGGTAAAACGGACGATTTTACGAAAAGAGT ACttttaattttgacaatttcgtcggtcaaaaatattcgtcggtcaaaaa tttcatcaccaagcgatttttcgtcactttttgccgacgaattttctacc gataaggtattttgtctcatatgatctggcctacgtgccgcgcttaaggg tggggtttttcagcatcccaaaatgcactgtaagggtgtgtttctgtgag attgcactgcaagggtcgaattttaaaacaaattcaaaataattgataaa aagaaaggtttttacttctcgtttgtttgaaaaagtttctattgccTGAT AATTACacctgacaagaataatttttctttgaaactgaaaatttcccaag cttcttttttcacgcagatttacagctgaaaaatatagtgcactataagg gttggataaatcaagagaaaatgcactgaaagggtaccttttcagccaaa ttgaactgcactgtaagggtacgattttgaaaagcagattttgcgcggca cataccgtcgtttcgaaatcgagtgccccctccCTGGGACAAATCGTCAT ACCAAAATCGAAAGTCCATTATCATGATTTTAGGCAGTATTTTAAAGGGA AAGTCCTAAATTAATCAATAATCTTTTTCTTTGGGGAAAACATGGGAGGT TATGAACATCAAAGCAGGATTAACATAATTAACGGGAGAATCTTTTATTA TGAGTGCTTTTCAAGGATTAGTTTTTGAAACCATTacagaaaaagagaaa atctaGTCAACCAATTACACTCGTTTCGTAGCTAAACCTTCTAAGCCAAT GAATGGCCCTAAAAACTAATctgaaatattaattttttaactgaGTCCCA CATATATCCCGTGCAATGCAGTTTCTGCTCGGATATCAAAGGGATTTGAA ATTGTTTGAAAGATTTAGAATGCCTGCTGAAGCCACTGAAACAGAAAGTA ATTCTAGGATTCATTAGACATTGGCTATGCTCCCTTTATCGCGGTTGAAA GCTTTCAGCAAATTTGGATACTGAATTGAAAGGACTAAACATCGGTGGTG ATGGAAAGTGTGTCATTTTTCCCATCGTTTACAGTCGGAAaagatgtttt aaatttttgcttaatgtCCAGTCAGGGTGACAGTTCAGTGTAGCTAACGA ATTGCGATAAGATTATAGGGTTATTGTTGGCCATTGTTCCCAAAACAGGT CGTTTTTTGACCAGTTTCTATAGTGGGGTAACCTCTCTACCTGATCACGG GAGTTTCATACATCTcttaattgaaaattgatctcGAAGCTAAGTGTTAG TGCCGAAAAGGCTCTACCtaacaacaaaatattttccgtGAGTCATAAAT GTCTTCAAAGAAAACTACTTGACAAATTCTTTCATAAAAATGTCACTTCC GTGCCTATAAACTCTTGAAAAGTTTATATGCAGTCATTAAGTGAAAAGGC CAGCCAAATACCGACGAGGGGTACTTAACTGCGGTATTTCGATATAGTGT TCTTTTATAAATACTTTACTACTGAATCACAAAAAGTCTTTGCCTTTCCC ATTTAGTATTACATCACAATTATGTGAAATTAAGGCGTCGCTGACACCAT TACGTACCGAAGGGGCTAGAGGTAAATCGTTAACCTTTATCaatcaagaa aaagtgaagccttaagatttaCACCGTATTTAGAATAAAAGTGACTGAAT CTAGCCCCGgaagggggggggtactagggttgcgagctaaCGGgtggtgc cgcccgactttcgagctttggacccttaccgggactaaaaaggagaaaaa aaaggaaaattttgggaattttacgacccttagcgggacaaatttgacca attttgatctttcagggggtaaaaagttttttcaaaatctagcgATAGGT TTTAGTTTTACTCTCAGTTATGCGTTTATttgaaaaccacgcgggtcacG AGTTTTGGATGGCAAtaaagtggcttcatttcccatccaggagtttcaAG TCCTCAAAAACTTCGGGGCTTTAAAGTCAATGGTTGACAcatctttaaat atttttaccaaGAAAAACCGTTTATTCAAAAGTATTTGGTAAAGTAAAAC GGCTTATCTATGATATTTTTGGTGTTACCAAAGTCAAATACCTCTCTaca cttttcaaaaatcgtttaaCTTTTTCTCCAGAAACTTCTCAATCTAATAC TCAAGAGTAAACAATAATCTCTTTTTGCAAAGGATAACTTCAACTGTAAA CTTGGGTTTTTGGCTTATAAAAGGTGTAGTGTAGTgtcaagataaataaa aaatgttcataGCGCTTTCCGGCAACCTGTCAAACGGCCGACTAAATCAT AACTTGCTAATACTTCCGACGGGATAAAGTGAATTTACATAAACACTTTT TGACAAGACACTCCCTTATGAAACATtcacaaaacaaacaaaaataaaag cgTATAAATGTTTTTCTTAGGTTAAGCTAACGTACAAACCTTTTTGAGCT TGTCGACCAATGCTTTGGCAGACCTAACCAAATATTTAGCTCTACCTTAA ACAGAGCCCTTTTTTTTCTAAGTTATTAAATGACtgtctttttcacaaaa tctttTCCATTCAGGAAACCCCTTGTATTTTCTattgttatctgatattc cgatggcggccgcccacgctaaagttctaaaggagcgggccaaatTCTCA TaagagaggaatgatagtcggcctttgatgtgcctcATCCCCAGTCGGGC TCAACTACTCTTGCGCGTGAAGGtagaaatatttcggttggacccgccaa tccccgaaaacgaggccTGGGACAACAGACCTctcgctgcaaaatccttg acgcggtcttgcaaaattccgtactTTAAACCTAAagcgaccttcagagc tttggCGTGTCGGATGAAGatttctgcatctgggtgccagataacttCTA CTGAGCCTAAGATTCTCTTACTGGATGAAATTATAGATAGACAGATCATA GATCGAATCATATGGATATACTGTATGCCTTTCGAGGATGGGTTCTACCT ACGTGGGAACCACTTTGTTCTAGACCAATCTTGTATTTGTATCCGAGCGT CCGAGATTAGGGTCACATACCACTGCTGGAACCTCACTAAGTaatgatac acccctgtctcgcagtcCCGGTGGAACATTTTTCCTCAATCATTATGAAA ATCCCTATTTAAATCCAAATGCGGATAACAATTcttttgttccaaggtta aaaaatccagtggggatgattttgagtgcaattttcaaacattgaatttc gaatggggatgaaatcaaagtaaatttcccagtggggctggggtccccag cgcgtctatgacacaggggtgtaatgaTATTTTTCTGACTTTGATAGCTC ATCTTATTGATAACATtccaaaactgaaaaaagtgaatgcaaatatctaa aaatatgttttcttgCTCCAAATTTCTTTCAGATTGTTCGTACAAATTCT GTCACCAGAAATGCAATCAAATAGATGAAGAGATTATAGAATGTCAATGT TTCAAGGGATATGTCTTGGAAGCTGATGGACGAAAATGTGTTAAAGGTAG TTCTTGGCATATCAAGACAACATTGAGATTTCTGTAGACCCAAAAAGACA CTTTTATGGGTAGTAAAAAACCAAAACTCTACAGTGTGTCCCAGAAAGCG GACAACTTTATATATGtataaaatcctcaaaattcaTCATCTTAACTGGC CTTGTGGTCTTAGAATCATTAAAATAAGGAGATTTAAATACTATTAAGTA CTGACAAGTATTATATAAAATATGAGGACTTTCGATATTAatgggacaca ctgtattagACCCTTCTCCACCGATTGCACTAAACTCAGCCTCAcgcttt ctttttatttgaaatagtTGAAAATGATTCAAGAATCAATCGTTAATAAG TACTTTGCTTATGTCATTTAAACTGAATGTGACCTAAGATTCGGTATTGT TTCCTTCTAGGTGATGGTGATGTAAGTGATCCAACAACGATAGCAGAGTC ATCAGGAGATGATATTGACGATGCTGAGCAAAAAGGATCTGGCAACAAAG AAACCACAACCAATAACTGTGATACTGAAGGTGGTTGTGGTGAAAATGAA GATGGTAATGAAGGCTCTGGTGAAGAAGAGCCTGATATTAAACCATCATC CAGTATCATACCAATGACCACAACATCAACAATCCATGAAGTAACACCTT CCATTGATGTCATCCCTGTATCAAGCAGTAGTACCAAAATTGTTCATTCG ACACCTGTTAGAGCCTTGAAACCATCAACTTCGATTGTCCATCAAGAAAC ATCTTCAATCATCTCCTTACCTATGGTAACAACAGAGCAACCGATCTCTA CAATTGCAACGGATGCAACAGAGACGACATACGAACCAAAGGTCACAACA GCGGTTAAATTAACAACCGAATCTGAGACAACTGTCGCAACAACTGAAGA ATCAGATAATGGAATTATAGGAGACAAAGACTCGACAACAGAAACATTGA CAACACAAGCAACGACAGAAGATACAACACCTTCAACGGAGCAACCTCAA ACGACAAGAGCTGTCGATCTCACAGGTCGTGTATCATCTACAGTTGCACC AGTTGAAACAACAGTTGAAACAACAGAATCAACTGACGATAGTGTTGTTG TTATCAGTACAGAATCGACAACAGAAGTTCCTCAGCAGTCAACAAAAGAA TCGACAACAGAGGCAATATCTACAATAGAGCAATCAACGCTCCCTCCCAT TGGCGACAAGAAAACAACATCAGCAACACCTCAAACAACAGAAGATACCG ATTCTAAAATCATCgtcacagaagcaaaaacaacaacaacaacagttaTG ACAAGTTCAGAGCAACCAAAAACAGATCCAAAAATCGCTGTTGTGCCAGT CGTCTACAATACAACAACGCTCAAACCTGCAGCATTCACAACAGAACGCA CGACATCTAAAGAAACCGTCAAACCGATCGTAACTGATTCAGGGACACAA ACAACTAAAGAACCAGTTACAACAGAACAGATCGATATCGCTGATAAAGA CCGATCTACAGCTCAAAAGTCCACAGCAACAGTCGCTGCAACAACATCGA CCACTGTACAAcctgataaaacaaaagaaaaggtaCCTTTTGTTGCTACA ACCTTGCAACCGGAAACAacagaaaacatcaaaacaacgaTCTCAGTTCA AACTACCATACAACCTCCGGTTATCATGACAGAAGAAAATGCAAAGAAAT CAACTGAATCTTCGGAAATTATAACAAAAACAACTGAAAACATTATaatt acaaacaaaaacatgaaaactaCTTCGAAAGCAACAAAAACATCTGCCAC CGATAAACCATTGATAAATACATCAACAAAGTCGAAATCTACAAGAGAAC CATTAAAATCTACACGCCGCCCATCGAAATCTACAACATTGAAGCCAGAA GTAACAACAGATAAAATCAAGAAATTGACAACAACGAAAAACaccataaa aacaacaaaagcaaCAATAGCTCATACTACAATAGACAATGACATTAAAG ATGTCTATTTCACTCAGACAGACTCTCCAACGTTAAATGAAATAGACAAT GataatgaaattattattctaAGACCTACAGAGGAAGTCGAAAACACTGT CCGAGATCAACCCGTGGTTGGCAAGAAGGGCAACAGTAGTAGTACCATTA GAATGGATTGGACTTGTCTacttttaacatgttttttaatGCTCAGGTTT ATGGTAAACTGAAATTTATAGCGTTGTTATAATTGTGGTGTTTTTGAGAT GAGAGATCGTAATTGATACTCATGGTGTTAAATTCAACATCAGTGAACGC TGGTGAAAACAGGTTCATCCTTGTTAGCAATTCTGTATTGAAgacatttt caataaaatgtGATAAAATGGATATAAGAGCTACGGTGAAAGCTTTTTTA GACTACCAAAAGTTTTCATTGTAGAGTTACgattttttaagcttaaaatt taaatttactgATTGTCTCATCGGTTCGCCTTTTTCTGTTATGAATCTAT CCACTCGGTTGGTTTTTCTGTATGATAATATTTAGCAAATATAATCAACT GCTTAATTTCAAACCCTATACGTAGAATAGTTCTCCTCTAAGAAAATTTC CATATTTTGTCAAGGTTTGTCAACAGTGGACGGGTCTATGGGTAGATAGC CAAGATGCCTGACATGTCTGACTTAAGATGAAATTCTCCAAACCTTGTTA CTGTTCAGtagaaatattgataaatttattttcgtgttttaaattactta ttataaatataaattatataaattaaaCTTACATGAGTTGTTCAATATAC TCTTTTTATATGCTTTGAATCCACTTAAAGGACAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028189TCONS_00028189Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028189-proteinTCONS_00028189-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000670supercontigsc0000670:27210..34345 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.18 22.44 7.34 5.51 3.37 2.86 1.31 1.18 0.64 2.12 1.23 0.36 13.86 12.64 7.12 4.63 17 27.58 14.93 17.38 16.11 15 23.17 22.59 17.7 19.84 69.95 62.04 30.81 36.54