XLOC_015948 (gene) - C. hemisphaerica

Overview
NameXLOC_015948
Unique NameXLOC_015948
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000667:96509..103473-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015948 ID=XLOC_015948|Name=XLOC_015948|organism=Clytia hemisphaerica|type=gene|length=6965bp|location=Sequence derived from alignment at sc0000667:96509..103473- (Clytia hemisphaerica)
ACTCGTGAATTCATAGAGACAGTTCATAATCGGATTGAAAATGTGTAAAA AAGATGCTCATGTGATGTGTTACACAACCGATTACAGCAAATTCGATCGT AGCTGTGTCTACCATCTTTTTCCGATCCCCTCCAATTTTTTTTGAGCAAA CTCGACATTTGATCTCTTCTTTGAAAATATTGCTAATGTGCCGAAATTAA TTACATTATTTCTATGGTAACGATCAATAAATGGCGTTCGGATATAATAA CAAAACATTATAAAAAGTTATGAAAATTGTCTTGTTATCAAATTCACTTA CTAATAGGAAACCTTAGAAGGATGTATCAACTTTCAGGAGAAAAAGATGT TAAAAAAATAAGAAGTGATATCATTTTTGAGCAAGAAGAAAGAAGAAAAA CCGAAAATTCAGGACGAAAGATTCCATGTTTTTGTATTGAAAATGGTAAA CATCCGAAGTGGAACCTTTGTCCAATTGATACGACTCCGAAACTTTATTT TGTCAACAATAACAGGCCAGGAAACAACAGAACGAAATCAAAGATACCTT TACTGAAAACATCGAACGAAAAGTTGAAACTTCCTTCTTTAAGCTCACAA AATTCACAATGGGTTACAAGTACATGTTACAGAAGAAGTAAGATTCCGAG AAGAATTGACAGCAAAGAGACCGGAAATGATAAAGAACAACAACATTTGA TGACCCTTCAGTTTCGTGTAGATTCCGCTAACACGGACCGAAGAAAAACT TTGAAGAAAGGCTACCACGAAAAAGGTTTTTACAAGGCGCCACGCCCACA CCATTTTCGAGATGATATCCATCGACCAGTAAGTTTACGAGCAGCCATTA GCGTATTGACCACACCCACTTGTAAATTATTAGATTAGATTGACGACTGA CATTGTGCGCAAGAAACTGCGTCAATGTCAATGCAATAGCTTCACAATTT TGACGTCATTCACCCTCTCTCATTTGATTCGAACTTCAAACCTAAGAGAA GTGCCAACCCTACCCACGGTCGTTTTAAAGAAATCGAGAAAAATTTAAAC ATTTTCAGGATTTTTTCTGCTCGTCAAAATTAGTTCTCGCCAAAATAAGT TCCTCTATTCCCTTCACCTATATTTTTCCGTAGTCCCCAGGTTGGCAAAT ATATTGACTGTTGTTAGTTATAGCAAAAGTCGATAAAAAAAGTTAATAAA GATGATTTTACTCTTTCCATTACTGTTCCTTCCTGTTTTTAGCTTCAATC AACTGAAGAGCTTGGGAAGCCGGACTTTAAAGTGAACATAGAGCACGATC CAAGAAATATCAACTTCAAAAAACATACCATAAAAAACCTAAGGATCCCT GGTAAGAAATATTCTAGTCGTCCACATTTGAAGAAAATGGTATCACTGAA AGTAAAAGCTGGAGCGCAGAGGGCGAAAATTTCCATTCTAGTAGCCAATT TTAATCAATTTATTGCAGCAAAGGATCAACATGAAAGAAAAGAATTTTAG AGTCCGGGGTTTGAAAATGAAGTCAATTCAAAAGTGCACTGAGCAAATTT TAGAAATTCTTCTCAACTTTTTTTCAATAGAGTTAGCATCAACGAAAGAT GGCGATACATCGCGTTCGTTGGATAGACTTCCTATGGAAACGTACAAAGA AAAAGAACCGCGCTTCGAAAGCAAATTACTTTTTCCGAAAGGGGTAAGTT TACGTTAATTCAAAAAACAAAGTTACTGTAGTGTCTTTAAAAACTTCTAA AAGGTATTCTGACAAGCTACAAACATTGAAAATCATCTTCAAATTTAATC TTTTACTTTAAAATTGATATTAATAATTCATTTTAGAAATATCGTAAAGG TCGTGATCCAAAAGATGTTCTCTACGAGAAGATCGCAAAAGCAAAAAATC TACCCATCTCCAATAAAGAGTTCGAAATTCAAAGACCTGATATCAATGAT CATAAGACAGTTGATTTATTAGAAATAACAAGAAATGGTCCACGTCATAA ATGTCTTAACCCCGTAGAATGAAACTCCATCAATAATGAGAAAGGAAATG GGCGGACAACAACAAACTTTAAAAGACATACGTCTGACATGTTATAATGC ATCAAAGAGCTACGGAATTAAGCAAGATGTCAGTAACCATCAATAGGCGA TGATGTTTCCCAACTCAAGGTTGTCGAAAATCCGAATTNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNGCCCCTTGAAAAGGGGTCCTACCAC CTTTTTTGACTCATTTCAACCTTTTCCAAGCTACTTTTCTTCAAAAACAA AAATAAAACAATGCAATGTCTTCTTTTTTCAACAAAAGATATATCTTCCG TTATTTTGATAAATATACTAAATATTTTACAAATATTTTTATATAAACCA TCAAAGAATCCCCCTCCAAATTTCAGGTCTCTAGCTACACTAGAAAAAGA GATATGCAAAATTGAAGAAGCATGACTGGAAAATTTCTTTTTTTTCTTTT TTGACACATTTTTCGAATTTTTCCAAGCTATTTTCCTTACCTTTTTTTTG ACATTTTTAGTCAAATTTTTTACACTAAAATTTGAATATCTTTACAACCA CTTATCCTCTGGACAGTCAGTACCTTTAGCCAAATTAGGAATATTTTTCT TACTTTTACTAACTAGTATTCCTAATTAGGAATCTTATTCCTAATTAGGA AGAAAAAAATTCCTAATTAGGAATATGAAGCAAATACCTAGATTTTCTCC AAAAATAGAAAAAATCGNCAGCAAATTCGATCGTAGCTGTGTCTACCATC TTTTTCCGATCCCCTCCAATTTTTTTTGAGCAAACTCGACATTTGATCTC TTCTTTGAAAATATTGCTAATGTGCCGAAATTAATTACATTATTTCTATG GTAACGATCAATAAATGGCGTTCGGATATAATAACAAAACATTATAAAAA GTTATGAAAATTGTCTTGTTATCAAATTCACTTACTAATAGGAAACCTTA GAAGGATGTATCAACTTTCAGGAGAAAAAGATGTTAAAAAAATAAGAAGT GATATCATTTTTGAGCAAGAAGAAAGAAGAAAAACCGAAAATTCAGGACG AAAGATTCCATGTTTTTGTATTGAAAATGGTAAACATCCGAAGTGGAACC TTTGTCCAATTGATACGACTCCGAAACTTTATTTTGTCAACAATAACAGG CCAGGAAACAACAGAACGAAATCAAAGATACCTTTACTGAAAACATCGAA CGAAAAGTTGAAACTTCCTTCTTTAAGCTCACAAAATTCACAATGGGTTA CAAGTACATGTTACAGAAGAAGTAAGATTCCGAGAAGAATTGACAGCAAA GAGACCGGAAATGATAAAGAACAACAACATTTGATGACCCTTCAGTTTCG TGTAGATTCCGCTAACACGGACCGAAGAAAAACTTTGAAGAAAGGCTACC ACGAAAAAGGTTTTTACAAGGCGCCACGCCCACACCATTTTCGAGATGAT ATCCATCGACCAGTAAGTTTACGAGCAGCCATTAGCGTATTGACCACACC CACTTGTAAATTATTAGATTAGATTGACGACTGACATTGTGCGCAAGAAA CTGCGTCAATGTCAATGCAATAGCTTCACAATTTTGACGTCATTCACCCT CTCTCATTTGATTCGAACTTCAAACCTAAGAGAAGTGCCAACCCTACCCA CGGTCGTTTTAAAGAAATCGAGAAAAATTTAAACATTTTCAGGATTTTTT CTGCTCGTCAAAATTAGTTCTCGCCAAAATAAGTTCCTCTATTCCCTTCA CCTATATTTTTCCGTAGTCCCCAGGTTGGCAAATATATTGACTGTTGTTA GTTATAGCAAAAGTCGATAAAAAAAGTTAANGGTTGGCAAATATATTGAC TGTTAGTTATAGTCAAAGTCGATAAAAAAAGTTAATAAAGATGATTTTAC TCTTTCCATTACTGTTCCTTCCTGTTTTTAGCTTCAATCAACCGAAGAGC TTGGGAAGCCGGACTTTAAAGTGAACATAGAGCACGATCCAAGAAATATC AACTTCAAAAAACATACCTTAAGAAACCTAAGGATCCCTGGTAAGAAATA TTCTAGTCGTCCACATTTGAAGAAAATTATATCACTGAAAGTAAAAGCTG GAGCGCAGAGGGCCAAAATTTCCATTCTAGTAGCCAATTTTAATCAATTT AATTCAGCAAAGGATCAACATGAAAGAAAAGAATTTTAGAGTCCGGGGTT TGAAAATGAAGTCAATTCAAAAGGGCACTGAGCAAATTTTAGAAATTCTT CTCAACTTTTTTTCAATAGAGTTAGCATCAACGAAAGATGGCGATACATC GCGTTCGTTGGATAGACTTCCTATGGAAACGTACAAAGAAAAAGAACCGC GCTTCGAAAGCAAATTACTTTTTCCGAAAGGGGTAAGTTTACGTTAATTC AAAAAACAAAGTTACTGTAGTGTCTTTAAAAACTTCTAAAAGGTATTCTG ACAAGCTACAAACATTGAAAATCATCTTCAAATTTAATCTTTTACTTTAA AATTGATATTAATAATTCATTTTAGAAATATCGTAAAGGTCGTGATCCAA AAGATGTTCTCTACGAGAAGATCGCAAAAGCAAAAAATCTACCCATCTCC AATAAAGAGTTCGAAATTCAAAGACCTGATATCAATGATCATAAGACAGT TGATTTATTAGAAATAACAAGAAATGGTCCACGTCATAAATGTCTTAACC CCGAAGAATGAAACTCCATCAATAATGAGAAAGGAAATGGGCGGACAACA ACAAACTTTAAAAGACATACGTCTGACGTGTTATAATGCATCAAAGAGCT ACGGAATTAAGCAAGATGTCAGTAACCATCAATAGGCGATGATGTTTCCC AACTCAAGGTTGTCGAAAATCCGAATTTACGATAAGGGTGGCTAAGATGC AAATCGCATGCGAATCTTCATTTCTGTAAGCTTTGGCATAACAGGATCAG AAATCATATCAAGCTCGAATTCGTCTGGATCGAGATACCATATTTCATTA AAAAACAACAAAATGTTTATTTACAGTTAAAAATATCTACAAAAATATAA ACCCCATCCAAACAGGATATAAAAATAAAGAGAAAAAACGTCGTAATGTC AGGTGGTCGGTACTAATCGTCGCTGTCGTAAGCTAATCGTTCGATTTCGC CGCGTAACCTAAAAATATGTGTTTTCAAGACAGAATAATTTAACTATTTC TAATTATCATTATAAGGAGAAGTATAAATTTTCAATCAACTTAAATGAAC ATTGTCGTGGAGAGTGCTCGATACGTTTCCATTGCCAAATATCAAATTTC ATTTTTCTTCAAAAATTTAAACATTCTACAGTTTGTTTCACGCTTACGCA ACCGCAGTATAAATATTAACTTTTTAAGAATTTTATGGATATTTTTTAAA GTGTATTTTGTGAATTATTTTTACAGTAATTTTGATATAAATAAAGAAAG CGTCTAAAACTTATATCGGTAGCTTCTTTGTGGGTTTACTTAACGCAAGT CTGACCTAAAAATATCATTACCCGAGACTACGTAACTAACAAGCTTGCCA TCAGAACTTGCAACTATGGATACATACCTGTCTATGATTGGGGTGTATAC TTCACAGACTTGGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00028179TCONS_00028179Clytia hemisphaericatranscript
TCONS_00028178TCONS_00028178Clytia hemisphaericatranscript
TCONS_00028177TCONS_00028177Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00028177-proteinTCONS_00028177-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000667supercontigsc0000667:96509..103473 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.72 1.6 2.46 2.72 41.2 30.49 32.34 31.87 15.5 29.73 14.45 11.08 1.51 1.32 1.35 1.32 0.94 1.9 1.08 1.6 1.55 1.82 1.6 1.4 9.92 9.18 19.56 20.29 3.33 2.93