XLOC_015711 (gene) - C. hemisphaerica

Overview
NameXLOC_015711
Unique NameXLOC_015711
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000646:162233..171461-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015711 ID=XLOC_015711|Name=XLOC_015711|organism=Clytia hemisphaerica|type=gene|length=9229bp|location=Sequence derived from alignment at sc0000646:162233..171461- (Clytia hemisphaerica)
GAAACATTTCTTATTTTCTTGTTATGAACTAATTAATGTCTTAATGATGG
CAATCAGTAACCGAGTGAAGTTATGAATCAATTATGAAGCTTGCTAAAAA
CAGTATCATATCGACTATTCTCTTGACTTTCTGAACACAAGCAGCAAGTA
GTTGTCGTTTTAAAGAAAGCTTGAAAGAATTCCTTGATGAGAATACGAAA
GCGGACAGCAACCACTTCGAGCGTGGATACAGATGATGTGTCGTATGATC
TGTTCATAGGTAATGACTTATACTCATTCTCGAATGTCATCAAAAAAGAG
TTAAGCATCTTAAAATTCTATTTAAGCTGGCTTAATTAACATTATTTCCT
GTTTAAAATAGAGATAAAGGGTTCATTTTTTACGATATACCATGCCTGTC
TGTGGTAATTACGAGAGTCGTTGTTAAATGGGAGTAGCAGAATCAAGACA
CATCCTGGAATTTTTTTGCTACCCTTCTTAACAGGGAATTCAGATCTGAG
AAAAAGCAAATTTACCCCAATGAAATTCTTGTGATAGGACTGCATATCTG
ATCTATAATTTTCAAAAAAATTGGGATGAAAAGTTGGTCAAAAGCCACCA
TTTTCAGGATTTTGAGACAAAGAAGCTTTTCCAAAATGTTCCGAAATTCT
ATTGTTACAGTAGTTTGGTTAAAAATACACCATCTAGTGCAAAGAAAAAT
TCTAAATCTTTTTTCTTCTCCGAAAATAAGCTCCTCAAAGGTGAAATACT
TATCTTCGCAAAAGTCTTCATTTTCTTTATAAACAATTTTTTTCGTTGCA
ATTTTTAAATTTTCAGATTCAGAAATACACCTTTTCGACCGTAGCCGCCA
TATACTTCACGGGCAATTTTTCTGCTTTATCCCACTAAAACCGTCCCAGT
CCTTTTTGTCGCACCTAACCAATAGAAAAATGTTTCAAAAAAGGATTGAG
TTGAGTAGGGGGATGATTAAATAATTAAGTGGTACACGTCTGACCGCGCG
ACTACGGTCGAAAAGGTGTATAGTTTGCCTAACAGTTTTGTTGGTTACAT
CAGCCAGAAAATACACGACAATTATAAAAAATTCACAATGGTCAGAGCCC
TTAACCTTATCTGCCTGTTTGTTCAGCGGTAGCGGCAAAACTGCTAAAAT
CTCAAAATCATAAAATGGCCTGCTTAAAAGATTTCCCTGCAACTATCTAT
ACCAAGTGGTCTGTTTTTCAGGACAGGCAAATAGCCGATTTCAAATTTTT
TGCCGCCATTTTGAAAAATTTTGAGTATGGAGGGAATGTATTTTAGCCAA
TCATGATTCTTAAATATTTATCTCAATTTTATAAATTTTCACGTTNATGG
CCTGCTTAAAAGATTTCCCTGCAACTATCTATACCAAGTGGTCTGTTTTT
CAGGACAGGCAAATAGCCGATTTCAAATTTTTTGCCGCTATTTTGAAAAA
TTTTGAGTATGGAGGGAATGTATTTTAGCCAATCATGATTCTTAAATATT
TATCTCAATTTTATAAATTTTCACGTCTTTTTTCTTCAAAAATTTACCTA
ACAGTGACCCTTTTTGGATCCCATTTTGTCAAAAAAAATTCCCTGGTGGG
GTTAGGTAAGGTGGCCAACCCCCCCAGAAAAATTGAGCAAAAAGGTCAAA
GCTTTCCCGATAGAATGTGAAGGTACCTGCAGTTTTTGCGACTTTTTCTG
GCTACCTTTGCCCTTTTCAAGGCCTCCTTTAAGCTTTTTGACATTAGACC
AAAATTAGAAGAAAGCTTTCTGTGACATGAAATTCCGTGCCTTCTGTACT
TTTTGTGAGCTTATTCTCTCTAACCTTGACCTAGCCTGGGAATCCAAGCG
TTAAACTTTATTCACAGTTTATGATATTTTTGTTGCTTGTTTAACGCTTG
GCGCAGGTAACTCGCCTGCAGGGAGATTTTTCCCTGCAATGCAGGTTCGG
CCTGGTTGGCCAGCTTTCGGCGTATTATCTAGCAGTATTTTCGCGCGCAT
TTTGATGATTTCGATGTGCGCGCATAATTTATGGAAAAAGCTGACTCTGC
AGAAAAAAGGAAAACAAATGAAAATGAAAACTATATTTATTTCGAAACAA
AATGGCTGTTGGCTGGAAGTCTAACTTCATGTGGCTGATGTTTTGATGTG
GTTTTTAGTATTTTTGAAAGTCTTTAGAGCTTGTAAAAGATTTTTTATGG
TAAGTTAATTATGTGAGTTGGCCTGGATTTCAAAGTTTAGAAAGTCTGTC
AACAAGGGTTCACACACAGACTGTTTATAACATTCTGTGTCAGACTAATC
TACCTGCACCAAGCTCTATAATCTTAGAACTTAGTGANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAT
TTTTGTATAGAATTTTTGACTGAAGATCGTGACGAAAAGTTGCGTGAAAC
TTTGAGTATCAAACAATTCTTATCTCAACTTCAATTTATTGTGTATATTA
ATTTTATAAACAAAAACTTTTTTTCTTTCATATAGCCTTGTACCTCTGGC
GATATCCCTTCTTGGTGTCTAGCGGGGGGATAAGGCTATTATTTTTTGTC
AGTAGTGTTTCGTCTTATTTTTTCGTTAGTGTACCGTGTAACCTATATTA
TAAAGAAAAAAATGCATTTGCGGGGCATTCATAGCGACAGCTGCTTGCTA
GTATATAGATTGGTCCGATTTGCCATATCCCAAAGTGGAATACATGAACT
GTGATTTAGTTTTAGTTTAAAGTTTTGTTTTGCTGCTATTTGTTAAATTA
TCAGAAATTAAAATTCAGTCAGAAGTGGACTTTAATCTACAGATGCTAAA
TGATTAAGCTGAATTTTACATATTCGTCATTATTCAAAACTTAATGGATT
GTTATGAAACATTTCTTATTTTCTTGTTATGAACTAATTAATGTCTTAAT
GATGGCAATCAGTAACCGAGTGAAGTTATGAATCAATTATGAAGCTTGCT
AAAAACAGTATCATATCGACTATTCTCTTGACTTTCTGAACACAAGCAGC
AAGTAGTTGTCGTTTTAAAGAAAGCTTGAAAGAATTCCTTGATGAGAATA
CGAAAGCGGACAGCAACCACTTCGAGCGTGGATACAGATGATGTGTCGTA
TGATCTGTTCATAGGTAATGACTTATACTCATTCTCGAATGTCATCAAAA
AAGAGTTAAGCATCTTAAAATTCTATTTAAGCTGGCTTAATTAACATTAT
TTCCTGTTTAAAATAGAGATAAAGGGTTCATTTTTTACGATATACCATGC
CTGTCTGTGGTAATTACGAGAGTCGTTGTTAAATGGGAGTAGCAGAATCA
AGACACATCCTGGAATTTTTTTGCTACCCTACTTAACAGGGAATTCAGAT
CTGAGAAAAAGCAAATTTACCCCAATGAAATTCTTGTGATAGGACTGCAT
ATCTGATCTATAATTTTCAAAAAAATTGGGATGAAAAGTTGGTCAAAAGC
CACCATTTTCAGGATTTTGAGACAAAGAAGCTTTTCCAAAATGTTCCGAA
ATTCTATTGTTACAGTAGTTTGGTTAAAAATACACCATCTAGTGCAAAGA
AAAATTCTAAATCTTTTTTCTTCTCCGAAAATAAGCTCCTCAAAGGTGAA
ATACTTATCTTCGCAAAAGTCTTCATTTTCTTTATAAACAATTTTTTTCG
TTGCAATTTTTAAATTTTCAGATTCAGAAATACACCTTTTCGACCGTAGC
CGCCATATACTTCACGGGCAATTTTTCTGCTTTATCCCACTAAAACCGTC
CCAGTCCTTTTTGTCGCACCTAACCAATAGAAAAATGTTTCAAAAAAGGA
TTGAGTTGAGTAGGGGGTGATTAAATAATTAAGTGGTACACGTCTGACCG
CGCGACTACGGTCGAAAAGGTGTATAGTTTGCCTAACAGTTTTGTTGGTT
ACATCAGCCAGAAAATACACGACAATTATAAAAAATTCACAATGGTCAGA
GCCCTTAACCTTATCTGCCTGTTTGTTCAGCGGTAGCGGCAAAACTGCTA
AAATCTCAAAATCATAAAATGGCCTGCTTAAAAGATTTCCCTGCAACTAT
CTATACCAAGTGGTCTGTTTTTCAGGACAGGCAAATAGCCGATTTCAAAT
TTTTTGCCGCCATTTTGAAAAATTTTGAGTATGGAGGGAATGTATTTTAG
CCAATCATGATTCTTAAATATTTATCTCAATTTTATAAATTTTCACGTTT
TTTTTCTTCAAAAATTTACCTAACAGTGACCCTTTTTGGATCCCATTTTG
TCAAAAAAAATTCCCTGGTGGGGTTAGGTAAGGTGGCCAACCCCCCAGAA
AAATTGAGCAAAAAGGTCAAAGCTTTCCCGATAGAATGTGAAGGTACCTG
CAGTTTTTGCGACTTTTTCTGGCTACCTTTGCCCTTTTCAAGGCCTCCTT
TAAGCTTTTTGACATTAGACCAAAATTAGAAGAAAGCTTTCTGTGACATG
AAATTCCGTGCCTTCTGTACTTTTTGTGAGCTTATTCTCTCTAACCTTGA
CCTAGCCTGGGAATCCAAGCGTTAAACTTTATTCACAGTTTATGATATTT
TTGTTGCTTGTTTAACGCTTGGCGCAGGTAACTCGCCTGCAGGGAGATTT
TTCCCTGCAATGCAGGTTCGGCCTGGTTGGCCAGCTTTCGGCGTATTATC
TAGCAGTATTTTCGCGCGCATTTTGATGATTTCGATGTGCGCGCATAATT
TATGGAAAAAGCTGACTCTGCAGAAAAAAGGAAAACAAATGAAAATGAAA
ACTATATTTATTTCGAAACAAAATGGCTGTTGGCTGGAAGTCTAACTTCA
TGTGGCTGATGTTTTGATGTGGTTTTTAGTATTTTTGAAAGTCTTTAAGA
GCTTGTAAAAGATTTTTTATGGTAAGTTAATTATGTGAGTTGGCCTGGAT
TTCAAAGTTTAGAAAGTCTGTCAACAAGGGTTCACACACAGACTGTTTAT
AACATTCTGTGTCAGACTAATCTACCTGCACCAAGCTCTATAATCTTAGA
ACTTAGTGAGGTGAGGTATTTTTTGTTTTTTCTAAGATTATGAGCTTGGA
TTCCCAGGCTAACCTTGACCTTCTCAAGCTCTTATTTAAGCTATTTGAGC
TTGCTTAGAGCAAAACTTTTTTTTCAAGCTGGCCTCTGGCAGCTGCTATA
ATTGTAGCTTTTCAAATCGTTTTGAGAGGTCAAAGAAGACCATTTATAGG
TGGCCTATATTAGGAGGGGTACCAAAAATATATTGACTGGTTAGAGGGGG
ACTTGAAATTCTTTTGAGGATATCAAGGGGTGTGCGAATCTTTTTTGGAA
TCGTTGAAAATATCCTCCACCCCAGATACTTTCTAACACTCCCTAAATTG
GAAATTTTTCAATTTCTTTTCTGACAGGGTACCAAATTCACCAAATATTC
ATATCTGACAGGGTCCATTTTTCAAACATCAGCGGTACGTCCCCGTGACT
GATCAATTGGCCAAATAATTGCTTTTCTCATAAAGAATTTTTTACGTCAA
TTCAATTTCTGACCTGGAAAGCATGCATAAATGAATTGGGTTTTCCATAA
ACTGCACTCATCTTTTTCAGTAGAATTTTAGGTACTAACTTACAAAAAGT
TCTTTATTGGCGCTAGGATTACCGGAAACGACTTGCAAAAATGTCACCTT
AAAATTATCCGAAATGGTCTTCTTTCGGCCTTATTTCCTGCCATCAGTTG
CCCATCAAAAACATATTGAACGACCACGAATACATTTTCAAAACCGTCAT
TTCACTCAATTTTCTTGATAGAAATAAGAAGAAATCGTTAAATCGCTTTC
TCTCCTCTTCAGCAAACGTACTACGCAGGAGAACCATCTCAACCAAATCA
TAATAGTCGTTTGAGTCTCCCAACGAAATACTCTTCCTTGGTCTGCCTTT
AGAATTGTGCCACATTTCAGAATACGGATTGAATTTTGTGAAAATGTGTC
TGTATGAAAATGAGCTAAAACCTTTTCTTTCTTGAAGTGTTTTTTTCTCA
ATTTCGATTTATTTTAAATTCAAACTTCTCCCATTTCTGAGCTTAAAACA
GTTTGAATTTCTATTACAGTAAGTAGTGCAGTGAAAGAGGTTTGACCTTA
ATTACAACCTGGAGCGGATTTTCTGCGGTTCTCCACAAATTTTGCGAAAA
TATTTTTGCATAATACTTTTTAAAGAGGGGTTATATAATGTAAATCTGTG
GTAATCTACGTCAGCCGATAATTATCTTGAATAAAGCCAATCAAGTCAAA
GCAAACAAAACTGATAAAAATTAGCTTTGATTTGAGAACTAATATATTTG
ATTTGTCTGCGATTTAATTTCTAAAAATAGATGTAAACTTCCCCAATATC
AAAATTATTCTTCTGCTTTAAATTGCTTTATTTCAAAGGAAGAACATATC
CATCGGTAAACTAAAAAAAAAATTACCAAAAATCTTGGCATTCGCAGTTA
AACTTTAGACCGGCATAACATTCGAAAGCAGCTGACGAGGCGACCTTTTT
TTCGGATGTGTTCTGAGAGTAGTTTAAGTTAGATTTTTTATTTGTTCTGA
TCATCAGAGTTTAGAAAATTAATCAGCTGGAAAATAATTATGTGTTCTGA
CGAGACAGGCGTATAGTTAACGTCATCTAACGTGTTCTCGTTGTCTAGGT
AACCCTAGAAAGCTCAATACCCATCTTTCAAGTACAGGGGCATAATCTAA
AGAATCTTAAGATTCGTTTATAATCTACAACTGACTCTCGTTTTCCCTCC
CGAACTCGAACGGAGAATTAAATTATATTATTATATTATAGAAATTATTG
ACAGGCACTGAAAAATAGTTCGAAAGTCTGCTGTAATGAAAAGTATTAAA
CGTAAAGTCTTATAAGAAATTCCAAGGAAATTAGTACTTAGCTCTCAGAA
TCTTTTGTGTCTATATTTTTAATTCTTTGCCTGGTCCATCATTTTGATGC
AGATTTCCTGCAAACTGCTGCGCAATATTCTCGGTGTTTTTAACTGATCA
ACTGGACGAGTGTAATCGAATATATTAATTGTGAGGAATACTTAAATTAA
GTTGTCAGGGAATCTCGGGGAAAATTCATTCCAGTGCCTGGCAGAAAAGG
ATTACAACCAATAATTTCCTGTAANGTAATCGAATATATTAATTGTGAGG
AATACTTAAATTAAGTTGTCAGGGAATCTCGGGGAAAATTCATTCCAGTG
CCTGGCAGAAAAGGATTGCAACCAATAATTTCCTGTAATTTAATTCCCCG
GGGGGGGGCACTCAAGGTAAATGACCTACCAGACGTTCGGCCCTTAAGGG
TAGGTTTTTCATAGTTTANTTTAATTCTCAAGAAAGCTTCCAAGAAGCCC
GACAAATATTCTCAAAAAGACCATTACTGAGCAAGTGAAAATCAAGGGAT
TAGAGAAGTAAAAAAAGATAATAAGAGTCGAATACCCAATCTATGCTCTT
AAAATAAGAACATAATAAGAACCATTGGAGCCAAATGATCTTAAAAAAAA
TAAACGACCAAGCGTCAAAAAAGATTTTTTGTTTTTATAGAAAAAGTGAA
TATACAGTTATTTAAGTTTCAGATTAGACATCAGAAGGTTTTTTTTAAAT
GACAAACTGGATCATACAAGGAAATTGTTCCACTGTGCTTTTTTAATTGT
AGACTGTATTTTCTTATACGTAGATTTTCAATGATAGAGCTGCCAATTTT
CATAAATGAACGCCAAAAGAATTAGTGTGGCAATTTCCGCCTGTTAATGG
AATAGTATTAGAGTTTGCTAATTAGTTCATTTTTATCATGAAGAGAAAAT
CAATTTTTATCATTAGCTAATTCATATTGTTACTTACTAGTAGGCCATAA
TGTGTTGACTTTATCAAGCGAAATCTACTTGTTATACTTAAAAAAGGTGT
TTGTTTAGCATTACGGAGAATCAAAGTCACGAAATGGGTTTAGAAGAACT
CGATTTAGGTAATAAATTAATAAATTATTTTTAACTCGGTTAAAACAATC
TCCACTGTTTCGGTTGTTTACGAAACTGTTTTTTTTTGTATTCAAAGCTC
ATTGTAACAAGATGGTGATGTCGAGTGTGGAGTATTTCTTGCACTGAAGT
GTTGAAATTGAGAGTACTGGAGTTTCGTTAGAAGTTTTTTTTAAGATTAA
GGTCAATGCTATGTTCAGAATAGTTTGTCAATTCATGGTTCTAGATTCGC
ATGATGGGAATTATCGTGGGTTTGTGAGCTGTGTGATCTGGAAAGAAAGA
TTCTTTCAAATTTATCTCTATGGCTATTCTTATTGCTTTGTACTTTGTAC
ATTTTCGAAATTGATGATTTTCTATTCTCAATAGACGAGCGGGCGAGGTA
GTGAATTGTGTCACTTCGTAGGGCACCCCTTAGATTAGGGCAAATTTTTG
ATATTATGCCCCTAAAAGTTCTAAGGGGCGTCCTACGAAAACCATTTTTA
AGGCCTTTTCTGAATCACGGACGCTGGTCTACAAATTGATAAGAGCTTTT
TGTCTACAATTTAATGAAACACATCTTCATTGTATTTCAGCGACCACCAT
GGTGGTGCCGTCGAAAGGACCAGCCTACATCTTACTAAAAGACACAGTTG
GCCTTAAAAGAGCCAAACGTCGTATCGGTGTACGATTTGGTTCGCAAACC
ATCTTCACTGCGCATGCAGGAGCCATCTACCTTGCCAACAAAGATGATAA
ACAACCTCAAGACAAAACCATGATTTCCTTGGTCTCGCTCACCGACACAA
AACGTATTTTGGTCACAGCAAAGGAGAACACACGCATGTTGACCACGGCT
GAGCTGAATATGATGCTTCCAATCACGTCTGACCAAAGACGCGCAAAAAT
TTTATCAACTTCAGTCTTTATGGAAGCGATTACGGCGCAAATTGATGACG
TTGTTGCTGTCAACGATGGTGAACATCAN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027814TCONS_00027814Clytia hemisphaericatranscript
TCONS_00027813TCONS_00027813Clytia hemisphaericatranscript
TCONS_00027812TCONS_00027812Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027813-proteinTCONS_00027813-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000646supercontigsc0000646:162233..171461 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11	0	0	0	0	0	0.52	0.78	1.33	0.98	1.9	3.1	5.18	3.34	9.03	9.72	2.66	1.74	0.86	0.72	0	0	0	0	0	0	0	0	0	0