XLOC_015554 (gene) - C. hemisphaerica

Overview


Name	XLOC_015554
Unique Name	XLOC_015554
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000635:19016..31206-

gene from alignment at sc0000635:19016..31206-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_015554 ID=XLOC_015554|Name=XLOC_015554|organism=Clytia hemisphaerica|type=gene|length=12191bp|location=Sequence derived from alignment at sc0000635:19016..31206- (Clytia hemisphaerica)
CACCAAGAACGTTCAGGACTGAAAAAAAGAAGAAAGTAGGTATCGTATTT
TTCATATTTAACGTTTTCTTGATATTAGATTTTGTTCATTTAGCGATTTA
GCATTTCTTGAAGAAGAATCACATATTCGTGAATTTTTCCCCTGTTCATT
GAATAGAAAATAGCATGTAACAGATGCACGAATCCTATTTTTCTTCCAAT
GAGTAAAATGAAAGCTATACGTAGACTTGTTATCATTTTTGTTTCGAGCT
GGTTAAAGAAAACCGCAGACCATTTACATATAATACTAGTCATAGCTTTC
ACTAAATGCCCCCACATAAAGATCATGTCATGCACTTATAAAGCTTTAAT
GCTTTAAATATTAAACATTAAAAAATANNNNNNNNNNNNNNNNNNNNNNN
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NCAACAACAACAAAACAATTCGCAAAATTTTGAGATTCCAGTCCAATATC
TATGCGTGAAACTATGAGAGCCTCCTCGTCGCTACGCTCCTGCGGGGGCA
ATAACACCCCTGTCTCACAACCCCGGTGGAACTTTTTTCCTCAGTGGGGA
CAATTTGTATTGAAATCTCAATCAGGATAGAAATTCTAGTGCTCCAAGGC
CAGTGGGAGCGGTTTTGGAGTGCAATTTTTAAGCACTGAGTTTTGAGCAG
GGATGAATTAAAACCCAATTTCCGAGTGGGGCTGAGATTCCAGGGTATTT
TTCGGGTATTTTCCCACTGCAAAATTTTTGTCTCATTTTCTAGTGGGACA
GAGGGGTGTCCTATATTTCAGAAACGCGGATAAAAAAGTAATCTGATTCA
GATATACACATTTTTTATGAGAACATCCAAAACTTTTGTCTGTACACAAA
CCCAATATCTACGGCTAATTTCAAAATTCATTGCCGTAGAGAACTACGCT
ACGATAATCGTGAGATACACTCTGGTACAGAGTACCAAAACTTACGATGC
CTTCGGTTTCTTAGCTTTCTGAGTTTTAAGCCTAGAAATCTTTTTTTTAT
TTTCACCATATTTTTTGAGTATTTATGTCCATTTTGTGTTTTAGAGTTCG
CGAAGCCTTAAAATGTTCGTAACTTGTTCTTAATATTTGGCCGTTGAAGC
CTTATGTTCTTATATAGCTTGTTCTTATAAAAACCTGTACCAAGCCTCAG
ATCTGTAAGGTTATGAACAAGGTTATAAATTGCGTGTGTGAATTCTGAGC
TTATAAAATCTTTTCACCATGACTGAAAACAAGAAATTTACTGAAAAGCG
GCCCCTGCCCTGTTCGTTATTGTTCGCTTTTTCAGCCATGGTGGAAGGTC
AGTGCAGTGCAGTACATGCTCGCTTTTTTAAAGGGTGGGGTTGGCCTTCA
CTAATGTACATCTCTCTCAAAAACAAATTCATGGATGGGATTGGTTGTTA
CAGATAAAAATTTTCGGCTTTCGATGTTTGTTTGTGAAAGGAGTCCCAAG
AGAAGGAAGAAAAAAATCATCGCGATATGACAAAGGAGAAGAAAGTTTGC
ATACCATTATATCTTTTCACACATTTTGGTGAAAAAGAAACTATAATATT
TTCTACTGATGCCATCTAATTTCTCGCAAAATCATGTTTTGTTTGACTCA
GCTGCCAGACGCTAGTTTGCAAGGTTGCATATCCATGACGAATTTAAAAG
TAATTTTTCGCTAGTTTTCTCAATTTTTTCGATCACCAAATTTTAATGAA
CTGCGTTTTGATTAGTCAAGGGTGAAAAATTATTGCTTCAATTTTAACCA
GAACACTCAGAAGTTTCAGAGTCTACAAAGAGTATTGATTACTCTTTTCA
ATCTCTGGTATAACATGATTTCTAATCATGTTTTTTAATCAGCTACACCC
AGTTTCGATATCTCATCATCATTCAAGGTGGAGGCTCTTTAGTTCAGCAG
GCGGAAGACATCTCATTATGTAACGTGAGCTGTTTTTAAACCAAACTTGT
TAATTTCTATACTAATTTGTTGATTGATGATTAAAATTGAGGAGATAATC
AGTGTTGGTGAGATTTTACACCGAAATGTTTAGTTGAGACAAAAACAAGG
AAACGGTTTAACTTCATTCGAATATTAAACTGTTTTAATTTGTCCATAGG
CACTTTCCTCGAGGAAATGACACTGGCATAAAAAGTGATGCAACCTTTCT
CCATGCAAAATGTGTGAAAAGATATATTGATATGCAAATTTTCTCCCCCT
TTATCATATCGCGATGATTTTTTCTATCTTCTCCTGGGACTCCTTTCACA
AACAAACATCGACAGCCGAAAGTGTTCATCTGCATCGACGATCCCCTCCA
TGTGATTTTGTTTTTAAAGAAAAGTAGTGAATTACTCTTGGCTAAAGCAT
GGGGAGCTTTACGGTAGTATGTAGATTTGCAGAGAACTGTCACAATCAAG
GGACTTTAATAATCTTTTATTTAAGTCTCTTGTCACAACTGAGATAAAAT
TACAAAGTGAAGAAAGTCTCCTGGGTTTTTTTTTTCACACAAGACGTAAG
ATGTGGTTGAATATAGCAGATTTGCAAATAAATTTATTGCAACGAATGTC
GGTGTTTAGGAATTGCAAGGCAGAGAGGATTTTTATTGATTCTGTTTCGC
TGTTAGTATAGTACACGTTTCCTTTTTTGTTGGCTTTTTGTTTAGTTTTT
GGAGAAGAAGAGCGGGCGCGCCATTTGTTGGTTTTCTGTTTCTCGTGTTT
GGCAGAATGCGCGCTCATTTAAAGTTCTTTTGTTTCAAATTTATGCCGAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAACGTG
TAGTCTCAATGTGAAAGATTGGGGATTGGATTTGAATAACGTCATATTTT
GGTTGTAAAGGTTATTTTTGTTCGATTTTCGCGCCTTTGCGAGTTGACGT
TCTTTTACTATACATCAAAGTCGTAAACCAATTACAAAAGTTTACGTGCG
GAGACAAAGGGTAACTTTTCTCACGACCATCCCTCATATGCTGCACAAGT
CAAATTTTCAAAAGAAAAATAATTTTTACAAAAGTTTGTAACTTTTCTTG
GTATAATTTACAAACTTTATAAATGTTGTTCACAAAAAAACAAATTTCAT
AACATGAAAAATACTGCCTGCAGAAAATTTTCATTATTTGCAAAATTTGC
TCATTTCGGAAAAATTCCTGTTTCGACAAGCAAAGTAAGGCCACCTGAAT
CTTTTGTAAACCCTAAAGGTTTGGACGTCACATGGCTGCCATTTTGTAAT
GACGTCAGTCCTAAAAAAAAGAAAAACAAAAAGCTCACACTGCTTCACAT
TTTCCCATGGCAACTGGCTTTATTTATAAGAATTCGAATAGTTGGCAAAC
GGAGCAAGACCCTCACCGCACCCAAATATATACAAATCTAAAATCCCATT
GACCTTAATAAATGCATTTCCCTTTATTAATCCATGCTACAAGCCAGTCA
AAGATTTTATCTTTTCATGATCTTTTAAATCAGTACTTTTTTGTGGATGT
CGAGGAATCGATATTTATATGTTCTTATAAAAAATACTTTTGTTCCAACT
TGTAGTCTTGGCCCAGGCGTGTTGGAAAGCTGACACTAGTCGCTACGTAA
AGTTTGTTTGAATTGTGGGGGAGGTAGGTAAACAATACTTCAGTGGGCGA
AGAATTCATTTTACGAAATTTTGGAAGAAATAAATTGTTAAACAAATATG
TTACCTTCAAAATTTAGTTTAAACTAACTTGTTTTTGCATTTTTTCTTGA
GCTGGCGTAACGACTAAAATTTGCGAAATGTGACGCATGACGTATATAAA
AGGTTGGTTAAATGTACAAATTCTTTTGTTATTGTTCAAGTTCTTCAGAA
AGGCCTTCAATATGGCCCAGTCAGGACTGGGGACTAGATTTTGCTTAGGT
AATCTTCGAGGCTTTTACTATTTGTAAAAAGTTTTGTTTTTTACACTTAG
GTCCTCACATTAGTAAAATGTGAAAAGTATTTAGTAAAGCAATGCTGAAA
TTTGGTCACGATAAGTGTAAGTGTCGAGTCACGCAAAGATGTTTTCTCTT
GCACATGTCTGAGATTTCTATTTGCTGGATTGGACTGTATGAAAATTAAT
TTTGAATTTTTGTGCATGCAAAATAGTAATTTTTGAGAGCCTTGGTCATA
CCAATGTAGACGTAGTTGTATTTCGACTGAATTCTAGGCCTGGGTTCGAA
AGTTTGTATGGGTCCTTCTTGGTTTAGTAGGCAAGGGTATCATGATTTGT
TTGCAACGAGGCAGGAGTGTCTTGAGTTGTCTTAAAAGAGACAGGGGTGT
CATGGATTGTTCTTTAGAGAGACAGGAGTGTCATAAATTGTTTTGCAGTC
AGTCAGGGGTGTCATAATTTGTTTGTAACGAGACAGGGGTGTCATGGGTT
GTTTACAGTATGGAGGTAAGAGTGTCACGATTTGTTTTACTGTGAGACAG
GGGTATCATGAATTGTTCTTTAGAGAGACAGGGATGTCATAATTTGTTTC
GCAGTCAGGCAGGGGTGTCCAGAATTATCTAATGTGAGGTACAGATGTCA
TTAATTGCTTACAGTGAGTCAAAATGATTTGTTTTACTGCGACACAGGGG
TGTCTTGAATTTTTTTAAGTGAGGAGTGTCGTAATTTGTTTTGCAGTCAG
GCAGGGATGTAATGAATTATTTACAGTAAGGCATGGGAGTCATGGATTGT
TTTATCAGGAAGTGTTGGTGTGTGATTACACATCGTTGCATAGCTGGCCA
AGCTCAATTTGTGTCTTCAGAAGGCGGAAGGCGTTTTCTTGTAAGAAAAA
CTTTTTGTAAGAACAGTAGTTTCTCAGATTTTGAATGCGGAATAATTTGA
GAGATTTTGTGTAAATTTTACATATTTCATTTTTCATTTAGTGTACCTAC
TTCTGAGTATATTTTGAAGTATCGTGTTCTCTAAGGGTTTTTTGAGAATC
CATTTCTTCGAAAACCATCTTATATTATTTGAATGTGCTTATCTACAAGA
TACATAGACACTATCAGAAGTGTGTAGGCTGTAGTGATATTAAAAATGAT
CGGTCGAGTTGATTACACAATCACATATTATAACTGTCACATTTAAATTT
GATTATAAATGGTTTGAGTATATTGTATCATCCTTAATGAAGATGTTTAT
ACTGATTTCAATCTATGTGTTGATGAAAGTTCAATTTTCAATCATCAGTT
GGCAGTTGACATGTCCAGGTGGCTGGCTCATGTAACTTTGTTTATTATTG
ACGATTTTGTGTCTTGTTTTCATATTTTAATTCTTGATGGTATTGTGATG
TGATCGCTATCGATGTCTTTCAGTCTTTTTTATACTGAAGCATATAGCTG
AAAGCCGAGGTGCGAATGAGAGACCAGCAAAAGATACAGAGGGTTTTCAC
TGTAAGGAATCGCTATAGAAAAAAAGCGCCAAATCTCGGTGACGCAATGT
TGTTTGGAGCGGCTGCCTTTGTTCCGTTTATCCGCCTTTCTGTATGGCGT
AACTTCTCTCATGTTTCGGTTAAGGGTGCTTTCTTTTATATTTTCCCTAT
CGGCTGCGCTTTTTGTAATGTTTTTGGGCTTTAGGGCTTTATCAGTTTTT
TAAAGTTTAAATGGATGGTAAAGGAAGATAAGCCTTTGATGTATCCAATA
GTTTGTTTAAATCTTTTAAATTTTTCAACAATGTTTCTTTTATTCTTTTA
CCCTTTGGCGAAGTTGCCGCAACAAAGATCTTCGCATTTTTTGAATATCT
TTCTTTTCAAATTTTACAAAATTCTTCATTTTAAAGCTTTTTTCTATCAT
TTGTGTAAAATTTGATCAAATTTTTCATGTTATACAAACTTCATCTATGT
ACTGTTTGACCAGTTGCAAATCAACTTTAGATCTGATCGCAGCAATGTCA
GATATTTTTTCATGAATATTTTTACAGTAATCCTTATAAATCTGGGTTTA
ATAGGATTTTCGTACGCGCGCCTTTGCACGCGTTGCTACGAGATCTAAAG
TTGAAAAGTTCGAGCTAAAGTGAAGAATTTTTCCGTTATTTCATTTTTTG
TCGTGTTATTTGCATATTTGCTAACGTTATGAAAGCCTCATGAGAAAACA
ATGAAGAAGAATAAGAAATTTCGTTTGTGGAAAAATTTTGTTTTCTTTAT
ACATTATGAAGATTTCTTTTCAACATTTTTTGATGGGAATATTTATTAAC
TCTATGTCTGGTTGTTATGTTCGCAGTTTCCAAACTTTTTTTTGCAACTG
ATTCTCTGTATGGGGGTGAAATTTTGAAAATTCTAAACCCGTAATCATAG
AGAAAGATCATTGCACTTCATCTGAGCTCATGCTCTGTATAACTCTCTTC
TGATTGGTTCTCACACGACCTCTATTTTCATTTTCCAACCACTCGTAATA
GCTCATTTTCAAAACAACTAATCTGATTGGATAATTTTTTTTGAACTCGC
CCTCTGATTGGCTGGCTTTTATTAATTTTCTTTTGATTCTATTGTTAAAT
CAGCTGATCAGTTTTTTTTGTTCCCTGTGATTTTTCTTATAAGCTGTTTA
AAATTTCATTTTCGTTGTGCTTTTGTTTTGATCTTTGAAATGAAAAGAAC
CCACCATTTCCATCAGACGCTTGTAGGAAAGGTGCTTCTTCAAATAAGTT
GCTGGACAACTTATGAGAACCAATCAAAAGTAGAGCTGGCTTTACTTTTA
TGATCCTACTTAACCATCCTTCATTTTGTTTTGATTCAAAAGCATCAACA
GAAACAACAACAACAACAACAACAACAAAATGCCTTGCTCATGTCGACAA
CAACAACGAAGAGCCAGAATCACATCTACATCAACCAATGGCAGCTTACG
AAGCCTCAACTCCTCACAATCAAGCCTTCCCGAAGAATTCGATTGCTCTT
TCTCAAGTGATGACGTATTTTATCAAAACAAAACAATGACTTTACAAATG
GGACGTTTATTAGGGTCCGGTGGATTCGGCTCTGTTTTCGAAGGACGTTG
TTCGGGACGTAAGATCGCTGTCAAGAAACTACACCACAGTCAAAAGAACC
CTAAAGCGATCGCCGAATCTTTCCACGCTGAACGAGCAGTGATGTCATTG
AAACATAGAAACATTGTTCGAGTTCTCGCCACCACTATGCATTCAAACAT
CTTCCAATCGTCGTCAGATCGTTTTGTTATTATGGAGTACGCTGGAGATC
GAAATTTATTGAGTTTATTAAACGATGAAAAAATACGAATCACTCGATAC
GATCGATTACGATACGCAACGGACATTGCAAATGCATTGCATTATATTCA
TAAATTGAACATTGTTCATTTGGACATAAAACCAGCCAATATCATCGTAA
CCATTAAGAACACTTGTAAACTTGGTGATTTTGGATGTTGTAAAATGTTA
CCAGAAAGTGGTCAAGGATCTCCCACAACTCCCACAAACTCTAGTTTGAC
AGGAACATTGGCCTACACAAGTCCTGAACTACTTAAAGGTATGTTAGTAA
TTCATACGTCTTTTTCTGTTTTTTTTTATTCTAGCAAGCATGATATGTCT
TTGATCATCATTACTCTGATTCTAACCTTTTTGTAAAATTTGATATTCTT
ATAAAAAACAGATATAAACTATCAGTTTTCGGGCTCAACATTTAGAAGGG
GATTAATCAACAAAAGGTTTTACGAATCTTTATCTAGCCAAATTAATCTA
TACAAAGCTTTCTGTGCAATGTGTAGTTTGATGAGCAATAAAGCCTCTTG
CAGCTAGTTGGGGCGGCTGCAAAATTCTCAGTCTTCAAAAGTTCTTTACT
TTTTCAATCAAAAGATTTAGTAGCTCAGCTGGTTTTCACAATGAAATTTC
AAACTTTTCACAAAAGTTTTTTAACTCAAACAAGAAAAAGAATTTGAATT
GATTTTATTTTTCTAAAAAATATTTTACTAGTTGGTAATAAAATTTTCGG
GGACTCCTCAAATATCAAAATAACGAAATAATATCAAAACAATTCGCTGT
TTGCCTTTTTTCAAAAATATCTTTTAAAGCTACCATGTTAATATGTATTC
AAATAGGGTTTGAAGATTTTCTAAACTGTATGGCACATAGAGCTTTGTTT
TGTCTTTTCGAAATCACATAGAGCTGTTCATGGATTGAGAAATCTTCTTT
TTTGCGGTATCTAACGAAAGAGAAAATTTGCGAAAAGAAAACAATCATAG
AAACTTGTTGATTGTCTCTTTAACGAACGAAATTACATAGCTTCATTTTG
CATCATCATTAATTGTGCGAAAAAAACAACTCATTGAAAATCAAGCTAAT
TACACTTGTTATGATATAATCATGTTTGTTGTTATATGAAAATTTAACCA
CAATTGAAACCTATTACAACATATTACACCAAATATTATCACATACTATC
ACTTCTCCCTTTTCCACGTTATATCACAAAAATCCTACTCAATTCAATAT
TTGGATACATTTATATATTTTTTTGACAACTCCACCCAATTTTTATACCT
TCCCATGAGAAATGTTGCTATTTTTAACTCAGCAGAATTCAACAATTTAC
AAAATGAATCCAATTTTCACAACGCGTTTTACATATTTTTGTATGATACA
TAATAAGTCAGCCTAAAAAGTACCCTACAGGCTATCTTCCAATATGTTAT
CACAATGAATAGCTGAAATAGAAAACTATTGTATAGGGGAGTGTATTTCC
TTTCAGCAGTGGCTGAATAGATAACTTATCTTCAGTTACCACAACAATGA
CCAATTTAATTCAATTTTCAATTGTTTTTTCCTTCAGGTGAATTTCCAAC
CAGCAAAGCTGACATGTACTCTTACGCCATTTGTTTATGGCAACTACTAT
CACGTGAAAAACCTTACGGTAACGAAAACATGTATGTCGTCATCTTTGGC
GTTGTGTCTTACAAATTACGCCCAAAAATCACGCCCAAACAACAAAGAGA
CAATAAAGCTTACATTAATTTGATTCGCTCTCTTTGGGCAGCTGATCCAG
AGCAACGCCCTTCCGCAAAGCAAGTCATGATGAAATTACGTAATCTGCGA
AAACAACCAATTAAAACTGTCAGTATCAGAAACAAAGAAAGATGGCGCAT
TTGAATATGTTTGAAAGTCGTTTTTCATTTACAGTCGAACTAGATTGCCA
GAGACTATATCAAAATTCAAGGAAAAAGTGATAATTTTGTGGATATTCTT
GTAAAATATTTATTAAATAGTTTATATATGATAATTGAATGTAATAATAT
AATGTTTAAAAAACAAAATACCTTATTTGCTAATATATACCAATTTTAAT
GCCGTCTCTTTTTAAAATTTCTTTTGTGGTGAAAATTTTCTTTTTTGACA
AGGTTTCATACTGTATTGAATACTTGGAAATGTTTCTAAATTAAATCTGA
AATTTTTTAGACAGCTCTTAATTTTCTTTTTGATTTTCTGAACATACAGA
GATCAAATTTTTAAATGATTTATCTTATAGTAATTATATTATAACCTAAT
TTCTTCTTCAACTTTTTGTATCATAGCAGAATTTTTATATCGAACAAAAC
ATTTCTTATCCTCCTTTATCATTATACTTATATTAACAGAATTGTAAAAT
ACAAAAACATTTTTATGACATTCTACTTGACTGTGAATTTC

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00027580	TCONS_00027580	Clytia hemisphaerica	transcript
TCONS_00027579	TCONS_00027579	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
Mos3 protein	TCONS_00027580-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000635	supercontig	sc0000635:19016..31206 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0.06	0.03	131.32	100.7	38.31	40.29	21.67	15.06	34.58	49.38	30.4	29.16	33.33	63.62	27.48	32.4	11.95	11.32	19.12	17.54	15.91	16.21	20.65	29.95	3.1	0.98	0.11	0.2

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XLOC_015554 (gene) - C. hemisphaerica