XLOC_015309 (gene) - C. hemisphaerica

Overview
NameXLOC_015309
Unique NameXLOC_015309
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000611:83900..92073-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015309 ID=XLOC_015309|Name=XLOC_015309|organism=Clytia hemisphaerica|type=gene|length=8174bp|location=Sequence derived from alignment at sc0000611:83900..92073- (Clytia hemisphaerica)
TGGAGCGGAAGTGTCTCACGAATGGTACATGGTCTTTACCGGATACTTCG AACTGTACGCGATCTTCGGTAGTTGGTTTTCGTGAGAAGTTGTATAGAGG GATGGAAAAAATTGCCATTAAAGTAAGTTTGAAATTCGTTCCGTCTAAAA AGCACTAGATCCCAAAAATTAGTTTCACGGTACTGCAAAGCTGTCCTCCA TCGGATATATATATGGTCGGGGAAATGGGAGATATATAGGTAGAATCGAT ATTTCATATGAATTAACTCAATAATGTAGGGCTTTTAGACAGCCTTTCGT TTTTATAGGGTCCACGGCCAGCTCGTTCCGCTATCCATGAACCCAATGGA TGGAGTTTTGGATAGAGCGGGTATTTGACGAGCATTCAGTGATTCAAGCT TTTAAGGGAGTACCTAAATTTGCTCAATTAAGCTTTTACCTCTATAAAAT TGCAACCGTCCTATGCAACCGACTGCTTCCTTCATGCCTTCTTTTTCAAA CCAGTCGTTTGTTGTAATTGACTTAAATTTCAATATTTTTTAAACATTTA GATTTACGCTGAACTGACAACAAAGGTCGTAAATATGACAACATTGAAAG ATTTTACCATACAATACAGAAACGAATGCTTGAATAAAGCTACCAAAATC AAAAACTTAAGTAAGTCTCCTTAACCCTATTAGCCCCAGGGGGGGGATAG AATCTACCACGCTGGAGTTCTTTTGTTTATATCTCGGAGAAAAATTTTTC AAACGACTTGAAACTTTCTGACTTTTAATAAAATCTTANNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNAACTCAAAATTTTAAAGTGCTGATAACTTCTA AACTATTTATTCAATCATTTTCAAATTTTGACACGTGATAGGCATTGATA ATAAAAATTTAAAAAATCTAAAGAAATTTTTTGAAAATGATGACGTCATC ATTTATGACGTCATCAAATTTTGAAAATTTTACTCATCTTCAGCATAGAT TTTAAGAAAAAATCTTCATGGAAATTAAAAAAACTGGCAATTATGTTAAA GAATAGTCTTTTACCTTTCAGAATCTTCAAACAGAATTGAAATATCTGTA TTGGTTCGACTGTAATAGACACTTTTGTAAACCATATATTTGGGCTTTTT TCCGACAGGTGGAAATTTTGTGATGACGTCATCAGTTTTTGGATGACGTC ATCAATTTTTTTTTTCTTCCTGGAAAATTGTATCATGATGGAGAACATCT GTACCAAATTTCGTGGCCATAGCTCTTCTAGATCGAAAATAATCGAGGGT GGTAGATTCTACCCCCCCCCCCCCGGGGGAAAAAAAAAAAAAAAAACCGG GGGGGTAAATTTTTCCCCCCCCCCCCCCCTGGGGATACAAAAGTCAAAAA AGCTTGGGGCTAATAGGGTTAAACCAAATTGATCTTTACAACCGCAAGGT ACCTGAAATAACAACCTGGTGCACATAATATTGTTTTAGCGTCCAAATAA TTACGTTAGATAGATATAAAACCAAAGTTCGTACATAACAACACCCCTGT CGGATAGCCCCGGTGGGAACGTCTTCCCACAGTGAAAATGAAAATTTTTT TTCTGATCCAAATGGGGATGAACGTTCCATTGTTCTTAGGTAAAAAAAAT CGGTTTGGAATGGTTTCGGAGTGCTATTTTTTCCATTGAATTTTAAATCG GGACGAAAAAATAGCCAATTTTCCACTGAGACTGAAACTATAGGATATCT TTCCCACCAAGGACAAAATATTGGCCAAATTATCAAGTGGGCAGAGAGCC CACCAGGTATTGGACACAGTGATGCATAGCAGACCCAAAATCTATGTAAA ATTTGAAAATTCATTGCCGTGCTCTTCGATATACGTGAGACACTCTGGCA CAGTAGCTCGTTTGTTACCGTAAACATTATTTCAATAACGAAATTCATGG AATATAACTAAATCGATCGTAACATAAAGGTAGATCATCCAGCTACGGTG CATTGGAATCTCGACCGGGCCAAAATAGAGATGCATCTCTGCTTTTTGCT ACGCACTTTAAAATGGGTTACGGGTAAGCAGGGAAAACCAGTCTAAGGAG TGCCCCCCTTCCCTACCGTTAGGTAGACAACTAAAGAAAAGGGAGCCCGC AGGTTGCCTCACTGCGGTCGTAAACATATTCAAGCATGCATATCGCCACA CCAGCACATATTCTTCAATTACGGGCTTCCATGATATTGATATTGAAAAT TTATATCGGTTACATTATGAGATACGATGAACAAAGGAGGATACTTGTCG CTTTAGTAAATTATATATATTGTCGGACAAGGTCCATTTTAAATTCATCA GAACAGTCTCTGGAGTTTGTTAAGGTCCATAAATAGAGAATTCTTTTTGC ACTTTTTTTCTATATACCTGATGTTTTTTCTCTATTAATCTTATATATAG ACTTTTCTGTAATAATCAATTTTTAGACTCGAGACAGAAATGTGGACCAG ACATGGAGCTCCGTTATCTTCAATGTTGGTCAGAAACACCGAGTGATAGC ACAGCATCGATTCCATGCCAACGTCCATTTTTTGTACCATTTCAAGGTAC GGCTTTGTTGAAATCGTTATTTTTTCGGCAAATTCAACAAATTGTAAAGC TAAAGCTTTTTTTGCTATAGTGCACAAGCTCATCGGTTGAACCACTAGCG GGGTCATTGAAAGAGCTTTAAAATTATTACTTGGTTGCTTCTTCAAAAAT TTTCAATAGTTTTAAAGCAGAGAAAACTGCCTGTCTTTTAATCTTTGTTT TGCCAAAATCCGTCGTTTTACTGGATTCTCTTGTCTCCCGAATAGACGGG GGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGTCCGAA TAAGCAGGGGGTAGGAAAATTTTCTAAATTCTAATAGGCGGGGTGGATGG AATAAGAGGGGGGGTAATTTTTTTTAACTGATATCAATTTCAACAACAAA AGTGAACCTTTAACAAATTAACACGTAAAAAAAGAACCAATACTAACAAA AAGGAAAATTTTAACAAGTTTAAGGTCTATCTACACTGTAATAAAAAATT AATTATTCAAATTTAATTAGCGGGGGGTCTTAATAAGAGCGGGGGGGGGG GGGGGGGTGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGAGG GGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGG GAGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGTGGATTTTTTTTGCTC TTAACAATTAGCGGGGGGGACGTCTATTGGGGAAACAAGAGTATTCTGAA AGTTTTAGCCCTCCCTTAAATCAGATATATATCGTAAAGAGCATCTCCTT CTACTTTACAGGCTCAATAACAAGACGATGTTTATCAAATGGGACCTGGG AGCGACATTCGAATGCTACACAATGCATACGGTTACATCCTGGACAGTTA TGGTGGCGTTTAGAAGATCTGTTGAATAAATACGGAGTCTATGTATGTAA AATTTCGTCTTTATCAGGGGGTTCGACTTTGTTTTTATTAGTCCAATCAA TGACAGTCCGGCTAATACTAGATTGTAGGCAAGTTCTTGATAAATGCTTT CATATGAATGTGTTTGGGCCAGTCGACAAGATATTTGACCGGCGAATCGT AATTTTTATTTTGTCTTAGCGACAAAGTTCACCTTTCCCCCCGATGAGAT GCCAAAATAAGACACCCTCCCTACCGTTAAAAATTCTCAACATTATGCAT AAGCAAACTTTTTGAAAAGAACTGAGTAGCTTTGAAATTACATATGATAA ATGTTTGCTTATTCTAATAGCCAGATAAAATTTTTACTGGAATAGAATTC AATTTTCTTTTTTTCTATAGAGAGTAATGCCTGCCTATGTCAATACCACA ACGGAACCAGAAGTGAGTATTTTTCGAAAAAATTAGCTCCTTTAAGACTT TTCATTTAACAATACCAGGCCGAGAGATGGACTAGGTTTGGAAGGTGACG GGCCAAAGTTTGAAAATTATTCCTTTGAGAGACTGAATTTCGAAAGTTTT GCCCATTTTATTTTCTAATTCTGGTCCAATTATGGAAATATATGACCCTA TGAGAGATTTTGTGACCCTTTCAGAGACTCAATCGCTGTTTTATATCACA TACCTGACACCGATTTTGCCTAAGTCATCCCCCTCCATCTAAATAATGAC GCATATACCAATAAAGAACAACATTTCAATGTTTGCAGCGAACAATAGGC TAATAGGAAGCTACTCAATAGAAAGATATCCCAGATAAATAAAATGAAAT GTTATCATGTAGAAACTGTTGTATTTTGTTACACCCCTGTGTCACAGACC CGCTGGGACCCCAGCCCCACTGAAAAATTAATCAAAAATTTTGTCCCCAG TGGGAAAATACCCTTGAATTTCAGCCCCACTGGGAAATTGACTTTTATTT CATCCCCACTCGAAATTACATGTTTAAAAATTGCACTCCAAAACCATCCT CACTGGCATTTTTTAACCTTGGAACAATAGAATTTCTATCCCCATTAGGA TTTCAATTGGAATTTTTATCCCCACTGAGGGAAAAAGTTCCACCGGGGCT GTGAGACAGGGGTGTTTTGTTAAAGAGACTTAACTAACTTTTCTTTTTGT ATAGCCTCCAAAACCTGTTCCATTTAACAAAACCAGCTTTCAGAAAACTG TCACCATTCATGGACATAACACTACGCAAAAACTGCTAGGTAAGAAAATT GTGTTGCTTAGAATAAATTGCTTTGCTCATTAGTGGTGACTCGCAATGTT CATTTTACATTTTATGTCAGTTTATGTCAGTGTACCGTGACTTCGGTAAC TTTGTCAATGAATTTTGTGAAAAGCAAAAGCGGTTTTGAAGGTGATGGAA ATTCATGGAAGATAAAACTAACCTCCTTTTTACGATAATCTTCCTTATTC AAATACGAGTTAAAGTTTTCTAATTTTTTGACTCCTTAGGAGTGGAGGTA GTATGTCCAGCTACAGTCGATCCTTACTACCAATACTGGCCGGATGGTCT TGTTAATTCCACACTGGTGCAACCCTGTAACCGAAATTTCTTCGAAAACG GTAGGTATCTACGAAGAGTAAACCACTCAAAAAAGTTCCAATCCAAAATT CCTTTTGGAATCAAAAGAATATTTTCACGAAGATCATATCACTCATCCCA AAAGTTTTTTGATAGTCAATAATGTTATTCCTTATTCGTCTCATTTTCTA TCTTTGAGGAGACGCCAGCTTGATAATGTTTGATATTCGTTTTTAGGCCT AACAGAAAGATCGTGTGGAAGCAATGGTAAATGGGTTTCTAGGGTTGATA CGTCAAATTGTGTTAAAAGATCCAATGGAACAGCTATTGCTTTACATTTT CAAACGTTTGTTGGAAGATTTGGGTATGAGGTAGGTTTCTGAATATTTTC TCTGGCACTATCCGGTCTGAGTAGGATTTTGAGCATACAAGCTTCAGTCT GCAAATGACAGATCCCCTAGATTTAGTTGCTACCTTCATTCTCAATTTTA GACCGATTTATATACGACTGAAAGTTTTTTGGCAAAGACAGGTCTTTTCA ATGCTTCCTCATCAGTAAGACCAAGCTCCAACGCAACAACCACAAAATCC ATCACTTTCACTACAAGTATAGATACTACAAAAACTCCGAATAAAACGTC GGCATTTTCAAATACCACTACATCTCCCTCTGCTACAAGACTCTCGAGGG TAAGTGTTTTTTCACTGACGGCTTAAATTAACAGGATTAATGAAGCTNAA TCGGACCCTTGCGTACAGGGTAGAGAAAATCTACCCAAATTTGAGTAAAT CTGGGCGAAAAATCGACTTTTAACCTTTCAAAGCCGCTAACTTTTTTGAA AAAGGCCAAAAATTTCATCATTTTTTTCTGGAAATTTATTCTTTCAAAGG CCATTTCTCGACCAGGACAAACGATTCAGGTATCAACTTTGGTATCGTTA GAAAGCCCTTTCTCTCAGCTACAAAAAATAGCAGATTTTTTTTCTCTGAA TCTCAAGTGGTCAGGAGTTATGACCAAAAGACTGTGTATCGGTAAAATGG CCGTATATAATATATATATACGTATTCTGGCTTCTAAGGGTTAATGGAAC GAGGAATAGCCCAAAGTATTCGTATAATTTTTGGATAAAAAGATATGGTT GCCCGTTTTTTTGTTTTTTTTTTCAGCAGTATTTCCCAAAAGAAGGAAAG AAAGAATCGTCAAATCTTTCGTGTTTTGCATTTATTTTTTAATCCATTTG ATCTTGGTCGAGGGAATGTTTGAGGGAAAAAAGAGCGAGGAGAAGCGGAA AGGGGTATACAAAAGATTTTTCGATCCCCCCTGTGTTGATGTGGGGAAAA ATTGAAACGAAAACATCAACGTGTAACCATCTTGTTTCATTTACAATGGT GAAATTTGTCGTTCTTTTTTAAATTTGTCGTTCTAAGCATAATGAGCCTC GAACCGATTTTCTCGTATGCTTAAAAAACGAAATGAGTAGTAAATAAGAA AACAAAATATGAGTCCATGTCAAATTTTTTTTTATGTTTCAGATAACACC TTCAGAGGAAGAACACATAAAAAACATTTTCACCATTAAATGCAAAGAAA TATCTAATCGCACAGGTAATGGTAATGGTAAAGTTCTAATATTTTGATAG TTTTATTGAATTCACTCTGATCATTTACCAAGGTCGAAATTAATATCTTC TGATGAATTGCTTTACAGTATATGACTTAAAATAATATTACTAAGGTAGT TATATCTATCAGTAGTCAGTTGCATGGAAGCAGGGGAGGGCTGCCCCCTA AACGGCCGATTTTTCGGGGGAAGGCACCGAAAGGCAAGGGTCACTAAAAG ACACATCTGGTTACTAACCTTTGGGGCCTCTTTGTATATTTACACCTTAG AATTAGCAGTTTCAACCAAAAAGAGAAAAAATTCCCAAAGATTTTCGTGA TCGTTTCGTTCGCGTCATTTCAAAAGCTATTTTACTTTCAAAAGGGGGCG CTTAAATCCCAATTTTCGAAAATTACCTCTCCATCTTTGGCCAACCGACC ATGCTAATGATGTCTATCATAGATTACCCCTGCGCTCTTGGCTAACGAGT TGCCTGAACAAACTTATTCTTCTAATAAAGATAAATCGCTATTCAAAGGA TATGATAATGTGCGGTGTGTGTATTTTACGCGCAAGTTATTTGTAAATAG ATAAACATTAGAAACTGACTTAATTGTGAATTAACTTGAAGAAGCCCCCT TCCCTTTTCTCCCCCAGCAATTCTCGTTATCGTGCACCCAGTGGGCACAA GATGTCCTATGGACGTCCTTAGAAAGTCCATTTTGGACGGGAGGACGTCT AGAGGAGACGTCTATTGGACGTTCTATGGACGTGCAATATGAAGTCATAT TCGTCTGTTCGATTTCGGTCCGAATAAGACGTCCTTATTTGACGCGAAAT GGACGCTATTTGGACGTTTCTTTTAAAATTTGACGTCTGAAGGACGTTTT AACGACGTCATATGGACGCCTGAGTCACTTCATTAATTGAAGTTTTCCAA TTCACGATCACATCACATATTTTTTTAATTTTCATGCATTCAAATAGGTA AAAAAAGCCAATTCAAGCAAATCGCTGGGAAGAGTCCCTTACGGTGTGTA CACACAACACAGATCTTCTCTGTTACTTCTTTTTCTTTTGAAATTTACAG ATTCATCACCAACCAATATGACATGTTCCGGTCATGTCGATGAATATTAC CATTGTTGGCAAGAAACTCCAGCAAATTCAACAATCAGAATCCCATGCAT ATCACTTTATTTCTATAGTGATCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027228TCONS_00027228Clytia hemisphaericatranscript
TCONS_00027227TCONS_00027227Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027227-proteinTCONS_00027227-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000611supercontigsc0000611:83900..92073 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0.96 1.15 8.28 8.94 10.02 16.4 0.29 0.2 1.49 2.17 0.05 0.13 0.68 0.15 0.4 0.39 0.98 1.35 2.48 1.16 0.19 0.65 4.39 2.89