|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00027227-protein ID=TCONS_00027227-protein|Name=TCONS_00027227-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
ERKCLTNGTWSLPDTSNCTRSSVVGFREKLYRGMEKIAIKIYAELTTKVV
NMTTLKDFTIQYRNECLNKATKIKNLNSRQKCGPDMELRYLQCWSETPSD
STASIPCQRPFFVPFQGSITRRCLSNGTWERHSNATQCIRLHPGQLWWRL
EDLLNKYGVYRVMPAYVNTTTEPEPPKPVPFNKTSFQKTVTIHGHNTTQK
LLGVEVVCPATVDPYYQYWPDGLVNSTLVQPCNRNFFENGLTERSCGSNG
KWVSRVDTSNCVKRSNGTAIALHFQTFVGRFGYETDLYTTESFLAKTGLF
NASSSVRPSSNATTTKSITFTTSIDTTKTPNKTSAFSNTTTSPSATRLSR
ITPSEEEHIKNIFTIKCKEISNRTDSSPTNMTCSGHVDEYYHCWQETPAN
STIRIPCISLYFYSD Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001879 | GPCR_2_extracellular_dom |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016020 |
membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001879 | GPCR, family 2, extracellular hormone receptor domain | SMART | SM00008 | HormR_1 | coord: 78..147
e-value: 0.012
score: 19.7
coord: 204..270
e-value: 0.0064
score: 22.5 |
| IPR001879 | GPCR, family 2, extracellular hormone receptor domain | GENE3D | 4.10.1240.10 | | coord: 36..144
e-value: 9.7E-12
score: 44.6
coord: 332..415
e-value: 2.3E-5
score: 24.1
coord: 181..271
e-value: 7.9E-9
score: 35.2 |
| IPR001879 | GPCR, family 2, extracellular hormone receptor domain | PFAM | PF02793 | HRM | coord: 90..139
e-value: 2.8E-8
score: 33.8
coord: 207..263
e-value: 7.8E-7
score: 29.2 |
| IPR001879 | GPCR, family 2, extracellular hormone receptor domain | PROSITE | PS50227 | G_PROTEIN_RECEP_F2_3 | coord: 366..415
score: 9.104 |
| IPR001879 | GPCR, family 2, extracellular hormone receptor domain | PROSITE | PS50227 | G_PROTEIN_RECEP_F2_3 | coord: 208..265
score: 10.905 |
| IPR001879 | GPCR, family 2, extracellular hormone receptor domain | PROSITE | PS50227 | G_PROTEIN_RECEP_F2_3 | coord: 65..138
score: 13.555 |
| IPR001879 | GPCR, family 2, extracellular hormone receptor domain | SUPERFAMILY | 111418 | Hormone receptor domain | coord: 366..409 |
| IPR001879 | GPCR, family 2, extracellular hormone receptor domain | SUPERFAMILY | 111418 | Hormone receptor domain | coord: 55..142 |
| IPR001879 | GPCR, family 2, extracellular hormone receptor domain | SUPERFAMILY | 111418 | Hormone receptor domain | coord: 205..266 |
Blast
The following BLAST results are available for this feature:
|
