XLOC_014488 (gene) - C. hemisphaerica

Overview
NameXLOC_014488
Unique NameXLOC_014488
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000547:135177..145763+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014488 ID=XLOC_014488|Name=XLOC_014488|organism=Clytia hemisphaerica|type=gene|length=10587bp|location=Sequence derived from alignment at sc0000547:135177..145763+ (Clytia hemisphaerica)
GCCCGCTCGGTTGGAATCAATGCAATGTATGAACAGACAAATGACCGATT
ATTAACATTTTCAATGATTAAAATGCAATATAATGAGACTCTTGATTATG
GCATAAGGCCCCATCTACACAATGTGAATGTATGTACTCGCTATATTGTA
GATTTTTTGTATGATTACTGTGTAACGTATTAAGCTAAGGCCAGCAAATG
CAGACTATACGATTTTAACGACGAGTGTTGACTGTATATACTGTATATAT
AGCAAGCCTGGCATCAGCGGTCCAACGGGAGTGTTCTTACTATAGGGACC
TATAGACTATTGTATGAGATACAAAAAGCAATAATAAACCCAACCGCTGT
CAACAACAAGTATCCTATCATTTCATCTTGGCGCGCGTGCATGAGAATGG
GAAGCAGCAACTCTCTTCTCTATGTTCCATTATTGTTGGTAGTTTgatat
aatataataaaaacatgatgTAAACATACCCTTAAAGATTTTCTATAATG
GACCCAAGCTTCTATTAACTCAAACCCCCAATGATAATTGACGCTCCCCC
TTCCTGCAAATATTGTCATCAAGTATTGCAAACTATACAACATCGTCTTA
TTTTGATCACCCTGTAGGAGTGCTTGTTACTGTAATTGGGAGCATCAGTA
AGTCAATTACACTATGCAAGACAAAGGCCAACCACCACTAATAGTAAgac
tttattattatttttcatgtttgCTCTGATACAAAGTCTTCTAACTACTG
TTTTTTTGCGGAGATTTTTGAGAGCTAAATAGTGTCTATTTAGATTACAA
GATTAGCTTTTATTTGCTTGTTGGTTTTTAATTTGAACACATGGATGTAT
TGCTTCCAGGATATATTTTGTTACTACAGGCCGGCGAAACTGAATTTAAA
TCTGGGCGAGTGCTTAGTACAATAAGTCTAACGATTGCTACGTAGGCTGC
TCTCCAATTAAGTTAACACCCCTGGAGTATATTAAGGATCAGTGTCAAAC
TTTAATGGTTTATTTGGTGTTGAGCAGctgtttttgtttcaaactgCTAT
ACCAATTTTATCACCATACTTTTAGACAGTTTTTCAGATACCATATCTAT
AAATGATTGGTAGATTGGAAACCAGTTACAAAACCATTCTAAAGACCACC
TTTGTGTGTTCGTAGAAAGTCTTCAAACTTCAACTtattttttggaacat
tttattttgttaatttgaCATGAATGCTACAATTAAACTTAAAACCCCTT
CACAATCACGTCAAAGTATCTAGCCTGCTTTCACTAAATCCTTAGTATTC
CATGCACGCCTCGATCTAAACTAAAATATTTGACAAGTTATTCTGCTGTT
GTTAAGATAGCCCTCTTGTAGAGTGAGTGTTTTGCTTTGACCTTGAAGAA
gactttaaagaattttttttttccattaccTTCTAAAAGTTTTCCTTCAG
TTTGAAGGCCTCGAAAATGTTTTGTTCACTTTCCCCTTGAACTCTTAAtg
ttatttgattaaaaaatcattattaaAGGGGCGCCAGGGCACTTTCTACC
ATCTTAGACAAAATGTGTATTTAATTATCAAACATATAACGCTTATAAGT
GGAACAACAAAAAGTATGTCAATTCCCATGTAATTGTACCATCTAATTAT
ATCCTTACCATGATTAAAGTGATTACTGCTCCTGTGGCTTTTGTACACTA
ATTGTTTAGGAATATTTTTGTCCTCGAGattcctttcttttttaaaaagg
tcagtgatacttttcaaatttctgGGTGAAATAGTCTTGGTGAACTTAAA
AGTCTTCCAAATATTAGAAAATGAGCTTGAGAGCTTGGAGCCCTTTTAAT
TGTTTAANAAAGTCTTCCAAATATTAGAAAATAAGCTTGACAGCTTGGAG
CCCTTTTAATTGTTTAAATTGATTgttaaagaaaatatatttagtACTCA
TTAAAAATAACATTTATATTGCTTAAACCTTAGGtttcttacacgttttt
taataagaacatccaaaacctttgaagccttcggatgttcttataacata
ttcttattttcactattttgtgagtatttttgcccatcttcctaagaaat
cagatgtttttgagtccacgaagccttaaaatgttctaaacttgttctta
acaatttggccattgaagccttatgtatgtttgttcttatataaaaaacg
tgtatcagacTCTCTCAAGAGGTTTCTTTCTTGGAGGTCTAATCAATGTT
TATCTCATCGCTTCAAAGGGTTTAGTTTTACATAAAATGTTCCCACTTCA
TATTTGGTGATGAATAGAAAtttccctctttctgaccaatcttgctccac
atccgtgtcaattcaatgtgaaaaagcttataaattaagattgatgagta
agcaaacgatatcaagTGTATGATTGAGTTCTTCAATTCAGGTTTCAATT
CGTTacaaaggttgttttttttgttgttgaaaaattAAGATTGATAGTTG
ATAGCAagaacctttttatttttatcttcaaCGGGGAGCACTTTGTAAGC
TTATCTGATCAAATTAAAAGTAGAACCACTGGCATTGCGAAAATATGATT
TGATTAATCTAAAAATGGGGTATGCTCAAAGAACGGTTAATGATGATCGT
TTTGAAATTCTGAGAACCAGATACTGGCTGCTTGACAACAAACTGATTGT
AACAGAGCTGATTTCTTTTTAGACTGTTTTCTGATAGCATTATATGACAT
ATTGAATTTCCTTTCACGTTTCTTCACAGGGAATcagagaaaaagaagaa
caaattgaaaatgaatcaTCACGGCAGCATAGATGCTATGCACGATCAAG
CCGAAGAACAATCCACGTCATCAACGAAGGAGAGCAAAAagaaatccaaa
gaaaacctaaGCAAGGATACAGAGGACTCCACCTTAgatgataaaaacga
aaacaacAATCTAATCAATAATAAGGataaaaagaaatccaaaaaggATA
AATCCAATACGTCAAACAGACAACCGgtttctttcaaaacaaaatatttt
ccatgGATTGTTTGCGCTACAAGCTTTGTGGTCCAGTTTTTCGTGCTGGG
CTTTTATAAAGCTTTTGGTCCGGTCTATGTGAAATTGTTACAAGAAGAAC
CAGAGGGGTATGGAGGTAGCCCCGTCGCTACTTGTAAGTATTTACTTTGC
TTGCCACCATAATCTCCCAGTATCCTTGTCTCGAGAAGCTTTTAACCAAT
AGGAATGCGATTTATAAGGAGCTTTACAGTTGACgttagaaataaaaatt
taggCTAGCAAATTTCCCTTTTCTCCATGTGCACAATCCTAGATTAAAGT
AGAGTCTCTCACacgttttctcgtcccttcagttaacaaagccttataaa
ccttactccataactcgaaatttcactaactcgaacaaattcgtgTTCCT
CGTGtgagttcgagttatggagactccaatGTATTGAATTCATTGAAATT
TCCCCTTGTCTTTTTAAAGCATGGGTAGCTTCACTTTCCATCAGTACATC
ATACCTAAGCACACCTTTATCCTTTGAAATCATCCGAAGAATCAAGTTTC
GACCCGCCATGTTGATCGGTGCTACGTTATCAGGTATTCATTCAGTAATT
ATCCTTTATAACTGCCTTCTCGAATTTGATTGGATTGATTTATCACTTTT
TTCACTTCATTCATCTTACGAATAGTTTAATTTCAATCGAAGAAATTCCT
ATCTTCCAACGATTTTGAGTTATCTTTCTTGTGAATATCGAAGTTCACGA
TTTCATTGAGTTTTGTAGGATGTCAAAGGCCAAAATTTAATTCAAAGTAG
TAGTGTGTAGTCTAATGACTGATTTGAaatctagcctgggaatccaagct
cataatcttagaaaaacaaaaaatacctcaccccacatagttctaagatt
atagagcttggtgcaggtataTTAGTCTGGCACAAAATGTTATAAACCGC
AGTCTGTGTgcgaacccttgttgacagactttctgaattTTGGAAActca
ggcaaacacacataatcaacttaccataaaaactctttcgcGAGCTCCAA
AGAtattcaaaactactaaaaactatgtcaaaacatcagccacatgtatt
tagacttccagtcaacagccattttgtttctaaatgaattatgttttcat
tttcatttgttttccttttttctgcagagtcagctttttgcataaattat
gcattttgataatttcgatgcgcgcgaaagtactgctaagtaatactgTC
GCGCGGGAAGAGGTTGTGCACGGTCCTCTCCTGGCGCGATAAgcgaatat
ttatttttatgccCCAGGCGTTTAAGATCTGACCCGCCGCTAGAAGACGG
AGAGGACTTGAATGTACAGTGGAATTCAGAGTGACAGTAGAACAAAGTAG
ACTAGAGTTTTTCGGCTCGTGCATATTTATTTCAATCCATCCAAATGATA
AAGTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCAGGCTAACCTAGGTCTG
ATGGCCACGCAATCCGTGATTCCTCAATACGTCTTGTCCGGACGAACGCT
CGCTGAAGAATATCTGAATTTCTATATCtggttgaaatatttttatctca
tgcataatgcatatttacaaacattcaaacatacaaaattctatttataA
ATCCCTCATGACAATACgtcgaaagctggccaatcaggtcgaacctgcat
tgcaggaaaaaatctaaaacaagcagcaaaaatatcataaactagactgt
gaacgtCTGTGAAACGCTTGGATTCTCAGGCTTTGAAaaatctaaagtct
attcacgataagtctgcactcttttttcttttacctataacttttgaagg
aattcttcaatctttataaatttggtatcgttggagagatatttgtgagt
gaaacaatttgaaataaaaaaatcttcaaaaaaattctaaaaatgaagat
gaaaatgaagaagaaaaaaatgaagatcttgtagaaacgtgctctaactt
tcattttcactggagagattctttgatctttggaggtcatcactgtgaag
aaatttcactaaaatatttattcaatacaaagttatgatacaaagttaat
aagtaattgaccccaaaaaacagcagaaaacagcgtttttagacgtcaat
tagcttataacttttgactgtatgaatatttttgagaaatttttttacag
tgatgacgttcgatgatcaaggttTCACTTTAAAAgttataccttaagtg
gataaattttcgcgtgtactaaTGTTCGCGAGACGAGAATTTAAAGATTc
cgcgtggattaaatttcgcgaaccaaaggtctttaaaattttcgcgggga
ttaaattttgcgaaaatggccttctttatttaattttgcgacTATATAAA
TTGTAACTAGAAAAGAGATATGTTTTTCTGATCGAACAAAGGCAGACAAA
GTCACTCAAAggctttcaaaaaacttcaaagaaagtACTTTTAGGAGGTT
ACTAGAGTTTATAATTGAAATGAAGAGTTGAACTCGTAATATGTTTTGAT
TCTAACATGTTATCTAGATTTCGCGAACTTTTATTtttgcgattgtaaaa
ttctaaataatttcGCGTGGACTAATTTTTGCGAATCAAAGGCCTCCAAA
ATTTTCACGTGGactaaattttgcgaaaatggccaaaattcgcgaaaacc
gcgaaaattaatccacgcgaaaatttatccacttaagggagaaaaaagag
tgcacacttagcATGAACAACGACAAAACTTGTACAGATCTTAGCAGGCT
ATATTGAGCAAAGCAATTGAAATTTTGGGCAAGGAGTTTCTCAAACAAAG
GTGGCAAAACACATGTAATAAGGATAATGCTAATGGTAATAGAAGATACG
TCAAATATCTTTCAATATTTGATATTTAATACAACTCAAACTAAGGTTTT
TATTCCAGGTCTTGGTTTGCTTGTCTCCTCATTCGCTGACAGTGTTTACA
TTCTCTACGTCACGTTCGGATTGTTGTTCGGATTCGGTTCCAGTCTTTGT
TACAGTTGCTCTCTCTTGATTCTGCCCCGTTATCACACAACATACTGGGC
GTTGGCTCATGGCATCGCACTAGCCGGGAACGGTTTAGGTGGCATGGGAC
TTTCACCGGCTAATGGTATGCTGTTGGATTCTGTAGGCATCAAGAAAGGC
TTCAGGGTATGTATGTGTTATTTGGCACGAGTTAACGATTGCGAGTCTCG
TACAAACTAGAAAGAAAGCTCGAGGAAGAAATAGTCCTAATggtttaaat
catttttgacATGTAGATACCTTTCTTGGTTCGACGACaaaaatttatta
tttgtttaaattcaaatctTGAGTTCTTTTCTAAAGATGGTcatgaaaat
aaatatcttATAATTTTCTACTCCAATCTTTAGATCATGGCTGCAGTGTC
GTTTGGTGTTTTGTTTACATGTGGTTTAGTCTACGAGACACCTCCAGAGA
AGGATCCtgctgaagaagaaaatgaagaggaCGATGAAGAAGATGTAGAA
AGTCTTAATGAAGAAGACGAAGAAAGATTATTAGAAGAAGAAGTCTTCTA
TCATGACACAATATGGAAGAATAAACCGCTTCTCATATTTCTTCTCTCCA
CATACTGCTTAAATTTCGGATACTACGTACCTTATGTCCACTTGGTGAGT
ATGGTTGGTTTATAATCCCCTTGTGACTGGTGCACTTATTATTAACATCA
GTAAAGAGATCCTTCTATTTGGTATAAACTTGGATCATTGCAACAAGGTA
TTATAGACAACTCCTTTGATTTCCAATGGAATGGCCTGGCAAGTGTGGTA
AGTATGGCTAGCCAGATAATCTTCTCCGTCTGGTCTGGAACCTTTCTATG
CTTCTTCTCTAAACACTTCTGATGGTCACAGGAAATTTTGTGCTGTTGCT
TTGTTCTGGAGGACTAAAATTGTTATAAAATGTTTAATGAGTTATATTTT
GATTTCCAGGTAAAGTTATCACTGGACGAGGGTGTATCGAAATCACAAGC
AGACTTGTTACCAGGCTTACTTTCTCTAGCACAGTCAGTTGGTAAAGTGT
TCATCGGCAAAGTATTCTCCTACCCTAGCGTCAACCGTATACGAGCATAT
CAACTCAGTTTGGTCGCTTTATGCATCGCAACAACTTTCGTCCCAGTCTT
ATCAAAGTCATACCCAGGCTTGTTAGTCTACGCAATAGCTTTTGGATTTT
CTGACGGTTGCGGCCAGGCGACGAATATGATTATTATAGGAGATTTAGCT
GGTAAAGAATTACTACCGAAAGCTTACAGCACCTTTTTGGTATGCTCCGC
TTCTGCTTTCGTGGTTGGTCCACCAATTGCAGGTTCGTTTCCTTTTTCTT
GATATCCTTTAATCTTTAATCTCAAAAGACGACAGTAAGTCANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAATGGCGTGGCAAGTGTGGT
AAGTATGGCTAGCCAGATAATCTTCTCCGTCTGGTCTGGAACCTTTCTAT
GCTTCTTCTCTAAACACTTCTGATGGTCACAGGAAATTTTGTGCTGTTGC
TGTGTTCTGGAGGACTAAAATTGTTATAAAATGTTTAATGAGTTATATTT
TGATTTCCAGGTAAAGTTATCACTGGACGAGGGTGTATCGAAATCACAAG
CAGACTTGTTACCAGGCTTACTTTCTCTAGCTCAGTCAGTTGGTAAAGTG
TTCATCGGCAAAGTATTCTCCTACCCTAGCGTCAACCGTATACGAGCATA
TCAACTCAGCTTGGTCGCTTTATGCATCGCAACAACTTTCGTCCCAGTCT
TATCAAAGTCATACCCAGGCTTGTTAGTCTACGCAATAGCTTTTGGATTT
TCTGACGGTTGCGGCCAGGCGACGAATATGATTATTATAGGAGATTTAGC
TGGTAAAGAATTACTACCGAAAGCTTACAGCACCTTTTTGGTATGCTCCG
CTTCTGCTTTCGTGGTTGGTCCACCAATTGCAGGTTCGTTTCCTTTTTCT
TGATATCCTTTAATCTTTAATCTCAAAAAACGACAGTAAGTCATCAGGCT
TTCTTCCTCCCTTTGAACGTTAATCTCTTTGTTCCAggggaaatatcatt
tgatcgATCAACAGTTTCCCTCCCGTCATTTTATAGCAGTTGGACACCCT
CCTATCACAAAGTAGGCTACGTCATagcttccttcgtttcgagcgtaaaa
ctcctactctaaGGTTTAAAAGCCTGGAgttgtctattgtgtagactaat
gACAGAGCCGGTAGGACCTTCATTAGAAAACTTTGCTAAAAATATTGTCT
TAGGTGAGAAAAACCTTGTAATTTCACCGCCCCGTTTCCTAATTCGTTAA
GACGACAGGATTGTCTTCAACTGGTTTAGACCCACACGCTGATTATTTGT
ATGTCATTACTTAACTAATGTTTTTACTTCTTGGTTATTTGAAGGCGCTG
TTTACACGGCGACTGGTGATTACTCAATCGCTTTCTTCATGTGTGGAGCT
ATGGCGTTCGGCTCGGCTGTCCTCCTCTTTCCAGTGACGTGTATACGGGA
CGAAGAACAATTCAAATATCGAGCTAAACGAAGAAAAGAACGAGCAGAAG
CTAAAAAATTAAGAGAAGAACGAAAGAAAATGGGTATGATATAtttgttc
atttgttttttgatttagTGTTTGGGATTCTCTTCTTACTCTACTAAATT
AGCCTGGGTATCAAGACAATACACTCATCATTGTTTAAAATTGTGTCTGT
GCCAGGTGGATTTCCGTCTAAACCTGACCGGGAatgagatttttgtttat
tcatcaaattagaaaaaaataaggaCGGGTTTCCGTCTGAAAAGATGGGT
TTCCCTGCTCCTCTTCTAGCCTGAATAATCAGACTgaaagcttttagaaa
aaactaCCTTAACATGAAAAGTTCAAAGATGTTATACATCAGGCACTGGT
GCTTTCATTGTGCAGTTTAAGCAGTTTGAGGATTGACTCaacttttaaaa
tgtattttgaaTTTACTTCCCTAATCCAGGCTTACCAGAAGAAGAAGCTC
CATCTACACCAAAGGACCATCTGTCGGCTGACAAGATGAAAAAGATACGA
CAATCACAAGTCTCCCTACTCACACGTAGCTGGCATAGCATTGATTTCAA
ACAACACAAATCTAAGAGTAAAGAAAGTATACGTAGTCGTGCTAGTAGGA
GAAATGTCGATTTGAACGAGGTCAAAGTTGATGCTTGATGCCTTATCAGA
CATGCGCGAACTATCtgactttttttatcaaactgtAACCGACCGAGTGG
TGATTGAGTGGCGGTGATGCGGTTTTATAAGAGCGCTCTTTTATttgtct
tttcttcttttttttactcCCAAGAAATTTTAGTCTATCTAACTGAGAAA
ACTCTTTTATCTTTTGAGACATTTTCTGGTCATACATAACTCCTCACTTA
GTTTACAATCAAATGATTTTCTACTTTTGAAAAGCTTGCTGACATCCGCA
TCAACGAATTCGTGCACCTATACTACCTACGGTTTTGCAGATCTGGTATT
TAGACCAGCTGAGAATATCTTTCCACCCCGATACCACGTCGAACCCTTAT
AGATAGATAGGTCGATAGGAATTTTCTTCTTGTCAAGTAGTTTTTAGCTT
TTATCGTGCTGTAAAGGTTAGGTCTCTATCAGAATTCTTAGCAGACGCAT
TCTTGAGCATCGCTATATGCTATACAACGCTAATTGGGCCGTTGCAGCCT
CCCTTTTGCATGTTTGTTTAATGGTATAACATCGTCATTGAGGTTTGTTT
AGAAATAAGCAAAttatttaacttttattttttgtcGTATACATTTTGTA
ATTTGTAGTAATTAttagtaaatattttttgattattgTACAATaaagaa
acaaatcaaaaataccctgaaatacTTTCAAGAAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00025784TCONS_00025784Clytia hemisphaericatranscript
TCONS_00025785TCONS_00025785Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00025784-proteinTCONS_00025784-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000547supercontigsc0000547:135177..145763 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.67	0.56	0.72	0.38	19.15	16.27	31.5	32.26	16.75	22.28	8.15	8.34	5.59	4.84	0.24	0.3	4.23	4.58	4.1	6.98	4.58	5.15	1.6	1.94	1.91	2.49	0.28	0.52	0.47	0.46