XLOC_012911 (gene) - C. hemisphaerica

Overview
NameXLOC_012911
Unique NameXLOC_012911
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000437:176052..185934-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012911 ID=XLOC_012911|Name=XLOC_012911|organism=Clytia hemisphaerica|type=gene|length=9883bp|location=Sequence derived from alignment at sc0000437:176052..185934- (Clytia hemisphaerica)
TGAGAAAGGAGTAATAAAATCTGATTAAAAGTTTTGAATTGAAAAATCGT
GACCCATAGCAATCTTATGTTATACTTTAAAACAAGTTGCATATACAAAC
TCTTTTGAACACGTAAAAATTTCTTGTAATTTGATAAAAGATAGTTTAAT
GTAAAGTTCTGGGCTAAAATAGCCGGTGGCTGCTCTTGTAAAATCAGTCT
TTTTTTGAAATTCAGGGTTTTGTGTATAATTTAAGTCATTTCAGAAGAGG
TTTTAGCTAAAGTTGACAAATTTGGAATTTTTCTTGAGGACTAATTTAGT
ACAGTTTTCTATATTGGATTTTCTAGGTTGGTTTTTCTATGAAACTGTGA
AAACAGCATGATCGATCAATCACTCATTTCCTTGATATTTTTCATCCAAA
TCCTAAGCCCGAATTTTTACAAACAACTGTTGTGTATTTCCGATGATAGA
GAGCTGGCAAGTAAACATAAGATCTCTTTTCTACGTTAATGATCCCTTCT
CAGAGTTTCGGTGAAATTGTTTCATCCAATGGATGTAAACTCGATGGATA
TTGATATTCCCATGTTTTTATGGCTGGTGATTTGAATTCTTGTTAGTCAG
AAAATTCTCTTTCTGTAAGTGGGGATGGTAAAATAGTACGATATTTCTAG
TGAGGATTTCTTTATTCGATTATTTTCAGCGGGACAAAAATTGGAGTGTA
TTCTTCTACTGGCTTTCCAGTCTAGGTCTGTGAGAAGGGTGTGTCATGGA
AGGAAGTTATTGAAGGATATGCACTGACCTTTACTTTAAGGGCAGAAACT
TTCGCGGGCAGAAACTTTCGCGTTTTTCGCGTTTTTAGCATTTTCGCAAA
AGTTTCTGCCAGGTAAGAAATTAAACAAGAAATTCGCAAAAGATAATTTC
GCGAAAAATGAACTTTTCCTAACAATCGCGAAAGTTTTTTCCAAGTTTAA
ATAGCCTAGGAGAGTCGATATTATCGATATTATCGCAGTGACTAAGATTC
GGAATGGGAGGAAGATGTGCAAATAGTTTAATTTTCATTTATTAGCATGC
CACTCTTTCGATTGAAGAAAAAAATGAGATTTGAAATAATTTTTTCACTT
TCCCTAGCCACTCGCGAAAGTTATTGCTACTAAAATTGAACATTCACAAA
AAACCGCGAAAGTTTCTTCCGTAAATTTTCTTCAAAAAGTAAAAATCGCA
AAACTTAAATCCGCAAAATTTCGCGACTTTTTGGTCTTGCGAAACTTTCT
GCCCGCGAAAGTTTGTGCCCTTAAAGTATATACAGTATGTGGCCCCCAAA
ACGGCGATCAAATTTGAAATTTCTCTCAAATCTAGAGGAAAAGAGATTTT
ACAAAAATTTTTGCTGCATGAAAACNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATTTCAACAA
TATTTTTCAATCGCTTAAAGATAGGTAGCTTTTTTCTAATGGCCCCCAAA
ACGGAGGTTTGAAATTTTAGCGATTTCTCGAGATATCTTTAAGACATGAA
TACGAAATTTTGACCATAGTTTTGGAATATGATTTAGAGGGTTTTGGGCA
TAAATTTATTTGATAAAATTTTTACAGTATACCCCTGGTTGTCAAAATGC
AGGTTTGGGGCCCCCAAAACGGAGGTGTAGTTAAAATCAAATTAATTAGC
CCAGTGGTAATAGGGGGAAAAACTATGAACATATTTGTGTTTTCCCTTAA
ATTTACGACCCGATGGATGTAAAATTTATGATTTTTATGAAATATTTCAA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNAAGTTTTTGAAAACAAATCTCTTTTGAAAATAGTTC
CATTCATGTATGGAATAAGCTGTGAAAATTTTAGAAAAAAAGCTTAACTG
AAACTAAAAATATTAAGCTTTAAAGATATTTTTCTCCTATATTTTGCAAA
AAAATTACAGAATTTGCCGTTTTTGCTGATTCAGCGAAAATTTTTATATA
TAATGTTAATTTTTTGTTATAAACTATTAACTTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTCAAGATGCTATATCTTTTACCCAGCCTCTAAAGT
CACAGATGTATTTGCATTTTCTGAACGGCATTAGGTGTAGAAAGTTTCCT
ATACCCCGTTTTTCATAACTTATTTTCAATATCAAAGGAGCTAGAGTGAG
TTATATGCAATTTTTATCTAATTTTAGTGTTAAAATATTTCCTTTAGACG
CAAATATGTTATTTTGAATCTGTCTCAAACCAGCAAAAACATGCTCATTT
TTAAGTATAACCATCATTCTTTCAAAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAATCGTTTAATTCTGATAAATCTACAAGTCAGAAT
CTTCATTTCAATGAAAACCTCCGTTTTGGGGGCCGTCTCCGTTTTGGGGG
CCATATACTGTACCCTTTATATCCCGGCCAAACGGATCCTAATGGCGGTA
CTACCCAATAGCGGTATAAATTCATCGATCAAAGATTGCGAATATAGCAT
GGTTCAGGCAGTGATTACATGCTTTCTCTTTGAAAACTATATACTTCTTT
CTTTTGATTGACATTCAATTTTGACAGATAAATTACGATGGCGAAGAATA
TATTAGATCGATTGAACGAAGGAGAAGTGATTATAGGAGATGGCGGTTAC
ACACATGAATTAGAACAGCGAGGATATGTGACCTCTGGCCTGTATACGCC
TGAAGTCGTCGTTGAACATCCAAGTGCCGGTAGGTTTTTTTGATTCTTAT
CTTGATTAATGATAAAAACTTAATGGGTTCTTACAAATTATTTGATATTA
TTTTTAACTTGAAATTTTCCAAATTGATAACAGATTAACACCCTATTCAA
AATGGGGCTGCCTCTAACTTTTAATAAGTTTCATATCTTGGGAACACGCT
GCTGGCATCCAACGGATTCGCCCCCTGAGGAGTCTCCGATTAAAAGTATA
TTTTAAGGGGGTTTTGAGGTCAAATTTTGCATGTATGGTCTCCTTATTAA
CAGACTTGCTTTCTCTTTAGTGAAAGAACTACACAAAGAATTTGCTCTTT
CTGGAGCTGACGTTTTACAGGCTTTCGTTTTTTATGGGAATGATGATAAG
TTGAATAACGGAAGAAATGAGAGCAACTTGTTAAATGTAAGTTTTCAAGC
AGAAATGTTAGCTTTGCAGCTAAAGCGAAAAACTGGACGAGTTTTGGAAG
TAAAATCTCTAAAGCATGACGTGATATAGAGAATTCCCAAGAGCCGTTAC
GCGTAGAGTAATTTCTTTATCAAGTTTTCTAAGCCAATCAAAATACGAGC
ACAGAAAACTATGCTAGGTCTTTCCTGGCGACCAAGATCCGTTGCTGAAG
CTATCGCCATCATAAAAATCAGAAATTCTTGATTCAATAAACGGAATTTT
TGTCACCAGGCTTCCAGATCACCCTGATATATGTTTTGGGTACACAATCA
CAACACACACCTTTCTCACAGCCCCACTGGAAATTGGCCAAAATATTATC
CCCGGTGGAAAAGTATCCTCTAATTTTTGACCCCACTGAAAAAAATCTGG
TAAGCCAATCATCACTTTAAATTATTGTGCTATTTTTTCCATCCCTACTG
AATTTTCTTGCTCAAAAACAATGGAATTCAAATCCCCAGTTCCGAGCAAA
ATGAAAATATTTCCCCATTGAATTTTGGTCCTCTATTTCTACCCCCACTG
GCTGAAAAAGTCTCACTGGGTCTGTGAGAAAGGGGTGTCATAACCCTCTG
TGTGGTATGTTTTTACTACCATTAAAGCCGGATGATAGTATCATATTGAA
ATGAAAACGAATTACTTTCATAGGGAGAAGAAATAAACAATGCCGGCTGT
CAATTAGTGTCCAAAGTCGCAAAGGATCATGGATGTTTTGTTGCATTGCC
ATTAGTAACCACAGAAGCATACTCACAAAAGAAAGGGAAAGAATTAGTGC
AGAAAGAATTTTTATCACAAATCAATATATTTAAGAATTACGAGGTGGAC
TTACTAATATCAGAGGTATCACTATCTGCTGTCTGTTGCCACTAGATTCA
TTGTTCCAAATCTTGAAATGCTTAAGAAAAATAGATTTCAATTTCTGAAT
GCCCGCAGTCGGAAAAAACCCTTTTCACGATGTTTTACCCCTCAACGGGA
GGGCTGGGAATGATTCTTCCAGTTCTTTTTTTACTATGAATGCCGAAGAT
TTTTAAAAGCTTCAGGGTTTTCTTATCTTTTGGACTTGGATTTTCGTAAA
GTACTCTTCTCAGCGTTTTTTGAGTATTTTGATGTACAGTTGACGCTCTC
GAATTCGATCTTCAAGAGGAATTGGATTTTCATCGAATGAAGGAGCTTAT
CGAATGAGTGAGCGTCGTTTATGAGAGTTTCTTGTTGACGGGGACTTTAG
ATTTCATCGAATAAGGGAGCCTATCGAATAGTAGAACGTCGAATTATAGA
GCGTCAACTGCATATGTCTTCCAAGAAGTACATGTTCTAAGCTCCGAAAA
TCTTTTATATACTTTGATTTTGATTTTACTAATTTAAACAGGATTTTATT
CCATAAATGCTTCACTAAAAAAAACTCACACCATTCTAGTTCATGTCATC
AGTAGAGGAAGCAGAATGGGCAATAGAAGTCATGAAAACGTTGAACAAAC
CAATCGCCTCTACACTTTGTATTGATCAGCAAGGTGATCAGAATGGTATA
TCTTTGCAAGAATGTGCTCTAAGACTTGCGAAAGCAGGTATGTTTTTCAT
TCTTAAGAATAACCACACTCGGAAGCCTAGAAGTTCTTACATGGGGTGTG
GAGTTTATGTATCGGAGGATATCGAGGCCGACGGTAAGTGAAATCGATAC
AAAACAAAGTCGATAGTTAATGTACGGCTCTATATCGCCTTTGCTCACCT
AAACAGACGACGGTATCTTGGTGTTTTTACCGTCGTCGAGCAAAGTGGAC
GGCGATTTCGGTCCTATGTCAGCTTTGCTTTATACCCCTCGATTTATCTC
GAATACATAAACTCGCTATAGTGTCCGAGGAGGGGGTGGTGAAAAATCTA
TAAAATTTGCCTTTTCCGGGGGGTTTACTTGCCGTTTGGGGGGTAATTTT
GCTGTATATGAGGGTAATTTTGAGTGTTCAGGGGGTCAACTAATACTTGC
CCGGGGGTTAGACCTGCTGTCCGGGGGTCAAAAGTCACAACTCCCGGGGT
GGTAAATTTCCAAAAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNACCCCCCCCCCCCCCCCCCCCATATTCAAAAAGCCCAAGCAGGTCCTA
AAAGGATAACTTAAAGAGGGGAAAACTTAGTTGGGGAAAACTTTTCAACG
GGGAAAAATGTTGTCACTTTTTCCTGACCAAGTTTTCTTCTTTAAGGTAG
CTCTGTTTTTTTACCAAGTAGAATTTTTAGCAAATTATGATTTTATTTTT
GATTCGTTATCCATAACTAATGAAACATGCCATCTCATCGCAGTATTTCT
ATATATTGCTCTTGAGCCTGAGAAGATATGTTCGAGTAATAAAGCTTTTG
AATATTTTCAAAAGCTTCTAAGGTAAAAATTTAAAAGGATTTCTCAATTT
CCTAATCTTGAAGGAGCTGACATCATAGGAGTAAATTGTCGTTATGAGCC
GTCAGTGGCAGTAGAGAGTATTCGAATCATGAAAGAAGCTTGTGAAAAAG
AAAGCTTAAATGTTCATTACATGACTCAACCGTGTGGCTATCGGACGGCT
GATGCACCCACATTGGGGATGACTAATGTTCCTGAGGCGCCTTTAGGTAA
GGAAATTGCAGAATCTATTGTCCTTAAACATTAGACTTTTAGTCATTGTC
TGTGTGAAGAAATGCTTTTTCAAAAAATGAAAAAAGTTACTTTGTTGCTA
CTGAAGTAGGGTTAAAACTCATTAGGGTAACATTTCTTTCCTCTTTTCAT
TTCAGCCATGGAATCACGTCAGATAAGCCGTTGGGAAGCACAAAAGTTTG
CGCGAGAAGCATACGAAGCTGGTGTTCGATATATAGGAGGTTGTTGTGGA
TTCAAAGCGTACCATATACGTGCTATGGCTGAAGAGGTGGGTAAAAAGTA
CATCATCCGACAATCTTTTTTTCCCAACATGCCTTTTCATAAATCATTTT
GAGTGCAACGACTGCCTTGTTTTGAAACAATTACCAAAGTGGTCCAGAGA
GAGACACTTCTAAATCTTTTGACCCAATTTTTTTCCCAAAGTTGAGATAA
TTTGATTTTGAAATCTCTAAGAATGAGTCTGTACACAGTCGTTACGTTGA
ATTTCTATTGTTTTCAAGTAAAAATTTAATAATTCAAAGTCGAATATGTC
AGCTTTGGACAAAAAATCGGTAAATTTGTTGACAATCGACAATTTTACAG
ACCAAAACCTGAAAAACGCTTTTGGTCTATAAAATACCACCCATACAAGT
TATGGATCACATAAGCGTGTTTTTGCGCAAAATTGTAATTTTTGTGATTC
TCGGACGTTTTCTATTAAAATACATGAAACAAGCTAGATGCTGAATGGAC
CTACCTGATGATGAAAGTTAGATAGCAATGCAAGGAGAAAAATGAAAAAA
AATCAGTCAGAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCC
AATCCCGAGAAAAGCTAGTAACGAACGGACGAACGGACGAACGAACGAAC
GAACAGAGGTTAATTTATAGGACCTCCACCGGGGTAGGTCCAAAAAATGG
AACCAAGGTAGATTCGATTTCTTATAGACTATACTTTCCAAACAATTTTT
GACAACTGCGTTGGCTAAAAAAATTGAGCGACCTTCAAAAATCGAATAAA
TTTACTTCTAGTACAGTTTCGAATCAATCCTCGGGATAAAATATCAAGTA
AAACATTCTCTGATTGGCTAAAGAGTTTACATAATTTACATCGTATTTAC
GTAATATCCACGAATCAAAAAGTTTGTTTACATGGATTCTTTTTCGTGCA
AATCACACACAGAACCAAATAGAGCCAATTCTAACCCGGTGTATCCCATC
TCATTACAGCTCTCTGACATCACGAAGAAATTACCACAAAACAGCCGATC
GAAAAATGCTGAATCACTAAAACATCACAGATTAACTGAATTTCAAAAGA
GGTAAGAAAAAGCTCTGGTAAAAGCCTCCATGAAGAGTTGGAAATAAAGA
AGAAAACTGTTACAACCTTTCACGAATTTTTGACAAATTACACGTTTTTT
TAGAAGAATATCCAAAGTTTTTGAAGCCTTCAGATGTTCTTAACTTTTTA
AGTTTTAAGCTTAAATATGTTCTTAACATGTTCTTATTTTCAACATTTTT
CGAGTTTTTTGGTCCATTTTCCTAAGAAAATAGGTGTTTAAGGGTCCGCA
GAGCCTCAAAATGTTCTTAATAATGTTTTTGCCATCGAAGCCTTATGCTC
TTATATAGTTTGCTCTTATATAAAAGAATACGTGCAGCATGTTTTCTGGA
ACCTGCTCAAAATGTCAAACAGGTCGACTCCGTCAGTGAGACGATAATAA
AGGATTAAATAATACCAAGGATTATATTTACAAGGGATATAATTCCTGTG
CCCATTCTGCTTATAAACACATCGTGTAATTACAAAGCCTTGAACAATAA
TTAATATATCTAATTTTTTCCTTATGAAGGGCAAACAAAGACTACTGGTA
CAATTTGGCTCCAAAAGACGGAAGAAAAGCAGCAGCTTAAAAATTCAACT
GATCAACGATCTATTCCTGAATTTAAGCAGACAATAGACGCATAAATCGA
TAAAAGTTTTCCCCAACTATTATTTCTTTCAAGATTTTCTATCTATTTTC
TATCAATGTTTGTTTGGCGATGAAGAAAACTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022983TCONS_00022983Clytia hemisphaericatranscript
TCONS_00022982TCONS_00022982Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022982-proteinTCONS_00022982-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000437supercontigsc0000437:176052..185934 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
58.55	52.74	29.85	27.94	3.8	2.6	1.3	1.6	1.55	1.59	1.99	0.89	32.75	27.61	44.26	45.24	20.1	24.84	1.75	1.09	7.16	6.27	23.41	20.26	4.32	3.34	3.43	4.21	17.53	19.43