XLOC_012842 (gene) - C. hemisphaerica

Overview
NameXLOC_012842
Unique NameXLOC_012842
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000435:112689..116853+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012842 ID=XLOC_012842|Name=XLOC_012842|organism=Clytia hemisphaerica|type=gene|length=4165bp|location=Sequence derived from alignment at sc0000435:112689..116853+ (Clytia hemisphaerica)
tcttactAATTTCAGATTTCatagaaaataaagatgaagtaaaataaaca
aaaagaaaaagaaaaccaaaaatgaggaaaatatttttactactAATGGC
AGTAGTTGCTGCTGAGTGCATGAGGAATGATATTGAGAAGGAAGTCTTGC
AGAAATTACAGGACCTTGCAACATGtgctttgagaaaaattaaatatACG
CATACGAAAGGAGACTGCACAGCATGTAAgttgtttgatatttttctttg
ggCCAAAATTTAAATTGGGCCAAAATCCCTAACAATTAGGCGAAAAAGAG
GATAATTCGCGAACTTTAGTCAACGGGAAATTTTTAAGATTCTCAATcca
cgcaaaaattaatccataGGTAGGTTGACCACTCTCGTCATTAACCAACC
TAAAGGATAATGGGAAGGCTATGTAGAATTTTTTAgaacgtcaatttttt
tgacagtGTATAGAACGGAAAGTGTCCCATCCTCTGTTAATTTGATCTCA
TATTCTCTTAAACTCGCTACCTGCAAGTATTTTAATTACTTCGAAATGTC
TTCTTAAGAGGGATAAAATCATTTGAAATTTCTACATTCTCCGTCTAAAA
ACCTCAATTATAAATCACGCCTCGATGTTCCAGTTAAAATAAGCAAGTTT
ACGACTTTAAACTTGACGTATGTGCCTCGACTATCCCAGCCAGTATCAAA
AGAATTATATAAGTacatttggaaatatttttggtggtCCTCACAGAGAG
TGAGTGCTGACAGATACTTGAAAATCTTCTCATACAAAAGGGACAATATT
AAGCGGAATGTGGTCTAGAAATGATTTATATGACCAAACCTGACAGGCCA
TTCACTTTGAACTTTGACAGCGTTCTATTTTAAAATCGGCTGGAACAAAT
ATGTACTTTACGCGTTGACCACAACCCAGAAAATGTAACAATTAGCCAAA
ACAAGGGTTGCAAAATAAAGTTCACGtaattttattcccatgttacttgc
tttacaacttacagctgataactttatcagtgtcaataaattcgaaccaa
tcagaaataaatgtcatgtaacaagcacataaaaatttcgagtgaaagcg
tgatttgtcttccgactttaattttgcaacctgtgtatctTTTTTTCTCG
ACATTTTTCGGAATCTGTGTACTgtatttttatttaataaatTTCGCTTT
TCTTTCTCATATTTTCTAGCTGTGGAGGTTAATTATTGCAATGGAAAATG
TGTTTCGTATACAAAGTATAAGGAAGACTATCCCTTCTTCGAAATGAATT
GTAAATGCTGTAGGGTTACTGAAACTGAACAGAAGCCTATTAGTATGAAG
TGTGGAAAACATGGGCTAAAGTACCAGGTAAGCATAGACTAGCAACTTTA
CAAACAAAGGGATCAAAGTTGGTTATGATTTCCCGCACAGgctaaaaaaa
atgaagatcaggCAGGATAATTTATGCACTTTTGGCTTTCGGTGTGATGA
CGAAGATACTGAATTTGAGGAACTCATCCTAACTCATTTCTTAAGGGCTT
TtattttcgctagcgatttataaaaaaaacttataagTGTGAAAATAGAG
TACGAGaagataaaattgattttggggATCNCTTATAGGTGTGAAAATAG
AGTACGAGaagataaaattgattttggggATCAGATAGTCTaggcaagct
agacgactaattcagacatagtagaaataaagcaaagaGTAATGGAGGGG
ACAATTTATataaactaaatcccgtaacaataatcgtaataccgagttta
tgtatttgcacttttgaggacggtagagggactgaagcgatttggaaaaa
cccgcaattccgccccgcaaaatcgaggacggtaaaagtgctgatttacc
gtcgtcctcagctggtcaggatctactcaaattagaaccttaccgaaTTA
GAACCACACAtatataaactcgctattatcaTACtgtataacgcctatac
tacttactttattacacgcattataaacgactccagtctagggaTCAAAG
ACGAATTTGAGACTTTACCATAAAAATTTaccataaattattttttcagg
tGGTGTTTATTGATGAGCCGAAAAAATGCGAATGTACAAAGTGTAATTCA
GAAGAGGAGCTTCGAAAAAGTTGAGAATGGAGAATCCGATCGGGCGATGG
CGAGAAATCGGGATAAGAGCAGCGGTTAGAAAACCTGGCAAACGTCTCCC
GGTCGGGATTAAAAGACTcggtatttcaaattttgccaatTATTTTACGT
ATTATTTAAAAAANACGGAACAGAAACAGAAAACCTGGCAAACGTCTCTC
GGTCGGGATTAAAAGACTcggtatttcaaattttgccaatATTTTTAcgt
attatttaaaaaaagagaattatgttCGTATGGGTACCATCTATTTTAAC
GGCCAACTTATACTTATTTTGAAGTTGGGTTTCAATAATTTGAGTTTCAA
TCTGTTTCAATTTGTACATAGATTTTACTTTACATCATCGGAGTTTGAaa
gataatttgattttttacttgtttAGCTACTATAACTACTACTACTGCAA
CGtttaacaaaaataatataGAAACACTCTCAAGACTCTCATTTTATTTC
TTACAATATTTTGTTGTTTGGCCGTATGATATGGTAGCCTTTTCCAATTT
ATTTGTGAGATGTGAGAATTTTTGAAAGCGCCGCCCTACATTTAATTCTT
CTGCAACAATCTTTGGCTAACTTATACAAGCTCTCATTTTGAAGTTCTGA
GTAGATATATTGGGCAAAAGACTAGATACCTACGATGGTATCGCATATGA
AAAAAAGAACGTCTCCTTAAAATTAATTAGTACTTAGATCAAGTCAAGTC
CAGTCTCAAATATGAAGCGATTGTCTACAAAAGAAAGGAGGTTTTCAATT
CTATGTAAAACTTGCGAAATTACGATAGATCAGTACTTTCTTCAaagttt
gtatttttaaagcggaatttataaaataatttgatgGTGTAAAAAATAGA
TTATGATGACGTTTTTTTGCGATGATTATtaccaaaataacaaaaaaatt
aatcagaAGATTTtgtctaatgtttttttttatttcctttggACGTTCGC
TCTTTCCGTTTTTTAACGTGTTTCGGCATTTTCTCTTTCCGTTTTTCTCG
ATTTTCCTCTTTGACAGCTTTCTTGTTTTCCTTACGTAACTCTTTCTTGC
TTTTATTTGATTCTTCACATTGCTCTGTCTCTGGCTCCGCCGTGTCGTCT
TCATCATCAGTTGATTCGCCGTCGTCGGTGCCGGAATCTTCAGAGCCTGA
CCCAGAGTCCTGGTCTGCAAAATGTACACCCTTTTTAGCACCCGACAGTT
CTTTATTCATACCGGTCACATTAGCGTAATAAATATTTTCGGTGTCACCG
TCCTTAGCTTTTTCCAAGTCTCTTTCGTAATCAATGACCTCATCAAGGCG
TTGAGGAATGTACGcatttttaaaaacttcttCATCAATCAGATCCTTCT
GTGACAACTCTTCCTCGGTGCGCGTACTAGCTACCTTCTGCGCATGCTCC
AAATAAGATTCTATATCTTCATCCTTAATCACCGGATCTGTCACAAACTC
GAACAATTCTTTTACCGTCATCACGGCTACGTTATGCTTACGGAAAAACG
CGTTGATATTAGTACAGTCCTTACGTAAGAACGTAAAGGCGCACGGGTGA
TCGTGCTCAACCGACTGTGATACGTCAATAATGAACATCTCATCTGAAGC
CGCGTTGTACAGAATATTGAATTCCGACAAATCGGCGTGAACCAATTTAG
CTTTCCAATACAAATTACGTAAGATACAGACACACTGTAAATACAATTCC
CGCGCCTTAGAATCAGAGATATTTGCGTCTTTTAAGAGAGACGCGGGAAA
GCCATTATCCCCTATGAACTCCATGACGAGAACATGTGAGCGCAATATAA
TTGGCTCAGGACAAGGAATACCTGCTGAATGAAGTCGCGCCAAATTTCTC
ATCTCCTTCTCAGCCCATGTTTTGACCATCTTCCTTGGGTTTCCTAGTGG
GGAGAAGAAGAAATGAGGAAAAATACTTGTAGATAGATTTGTAGCGATTA
CTAATCAAAAACAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022847TCONS_00022847Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000435supercontigsc0000435:112689..116853 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.65	0.29	2.13	3.25	6.62	7.96	21.73	2.62	56.18	56.03	19.21	24.01	5.79	7.54	43.55	51.2	17.59	14.61	10.13	11.1	6.29	10.54	18.39	17.54	0.81	0.79