XLOC_012623 (gene) - C. hemisphaerica

Overview
NameXLOC_012623
Unique NameXLOC_012623
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000424:77904..87484+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012623 ID=XLOC_012623|Name=XLOC_012623|organism=Clytia hemisphaerica|type=gene|length=9581bp|location=Sequence derived from alignment at sc0000424:77904..87484+ (Clytia hemisphaerica)
gaatgaaaataaagggataatgataattgaaatactatccattgatgatc cacggcactatcgtaaagctgcGCAGAAGCAGCCTAAATCTCAGTAATGG CaataatttattcaaaaatttgtGAACAAAAGGTATATCAATGCGTTAGA GAAGGTTAAAGACTTTACTGTcaacatagtataagaaagccgcggctgga atggtaacatctgaatttctgttgttctatctctgtcgtatttgatgagt atttgttgatcaagaaataagtaatgtagcatctttaatggtaaatttta ttggtttgtcgttgatacttacttctcagtttgttttagacattaatgat atgcccttgataatacacttgcattataaaatcattgtaaaggaaaaatc aacaataagaaatttaaacaagcacaaaatggcttggctgtaagaaatca aaaattaataaaatgcctcgaaatgccttcacaaaattttagtaaaatct ttttagaaatcaatgaaaaagtacatcaagataatactgtgaaaatttca agccagcacaccttcaaaatttatcattcaaactgacaggaaagttgtca tcttgaatatagttcttataatttcaaatttggcaaaaaactattgttac cacaaaatacccctaaaatatgtccaaaattagttcaagtgttctattgg gtacagattcaaagatatctagcaaaaaaaactttttgtgaaggaaaata agagcaaaatttcaaaaactatctaccaataatgaactgagcatcttgat gttcttataaagctcggagacagagatggaacagcaattatctgaaaaga caatgcggtacatattccagccgcggctttcttatactatgctgtCAATT TGCATAAACTTCCCCCCTCCccgcactaagattccactGTCACTTTTAAA AGCAGAAAGAGACAAGGACTCTAGGTAGTTGAAAAGATGGCTTCAAAATA TTTGGTTTTTTTGTAAGTAAACACAAAACCCTTTCTAATCTCATGCAGGT TATCCtggtagcaaaaaaaaaaacagaacattTTTAATGTTTATCACAAA TTGGATTCTTCCAAAAGTTTTGTAAGATTCTTGAAATTGTTTCAATATTA TGTTTTGAAGTATATATCGTCGtccacatgactaaaggttcaatctcaaa ataagtgtattaaaaaattggaaacctttttttttggaagaattttcttt gttttctagACAAGATtaggaaataaataaatatggACAACGAgccaatg aaaaagaagaaaaaaggcagcaaaaatagaaagaaaggatggcgaaaaaa tgTAGATGTGGAGGATGTCGAACAGCACCTAGAAGATACCAGAAGAGATG AAAGAACAGGGTACAAATTGATATTGTTTATAAAGGATAACATTAAAAAT GGCTATATACAAATTTAGTTGTTTTACATGCAGATCATTACAAAAATGAT ATTGGTtgatctttagaaaaaaataatttgaggcTTGGTTGGATTTCCTC AGTCTATAAAGCTCAAACTTTGAATTACATTTACATAAAGCTTTTCAGGG GATATTGATTTCAGAgctttgaacttgaaaataGCTTTGTTATCTTGCTA CTTTGTTTGCCAATgctattttgcaaaataactgTTTCCTTTATATTATA CATAACCTTTTAAAACTGTTCACTTTTTCTAGAGGCTCAGCAGCTGATAT TGAAAGCAAGGACTTGTTCTTTGTGGAAAAAGAAGTTAAAAACCTTGGTA AGTTGGTTTATACAGAGCTCTTGTAGTCAGAATACTGGGGTCATTGTAGT CAAAATGAGTATAAAGAGTCTGGTTGACAAAGTAACGGTTTGTAGCTTCA TAACATAATTGATATTGATATGCGTGGATTCAAGTTGAGAACAAATAAAT ATAATGAAATTTGACAAAGTGTGAAAAATCACTGTACTTGCATTAAGCTT GACTTGATCAACGTCAGATGCCAACTGATTGCAATGAGTGATAGATTTTt atgagttatttttttctgagaggCCTTTGCAATTATTCTATTGGAACTTT AGTACAATCTATTTGTTATTTATTATTGTTAATTACAATCTATTTCCCTG ACCAAATGCTTTGATTAAtgcagatttttttttcgacagcTCCCCAAAAA AAGTCTAAGCATAAGCACACTTCTGAAGATGAAGAACATGACGAGGAAGT ATATGTACCAAAGAAACAACAATTCATGGAACAATTACACCGggagaaag aaaaagaattgaaacggAAGAAAGCTGAGAAAAGTAAAAAGGCTGTCAAT GTATGGGGTcaaggtaaaaaaataattcgtAATATCGTTTCAATTACAAG TTTTTAATGACCTTGCCGTAAGAAGGCCATACTTCAATTCAAGGGTCAAG GTAAAGAAGAATTTCTGATGCAGTTTCAATTACAAGTTTTTATTAACCTT GCCGTAAGAAGAATGGCCCTCATCCCCTTGGCAAAGTATAGAAAtatgta tgatttttttcattgcgGTAGGGAAGCTCTGGAGAATTGGTTGCAAATGA GGTaacaacaaaatgaaatttttgttttgtataaATTATATCTATTTTCT GAATTATTCAGAAGTGTTGACAGTGAAAGACGCTTATTTGGATTCGACTG TAAAGAAAGCAAAAGTGGTAATACTTTTACCATTATTTTATTCAGTTTGC AATGCCCAACTTGCTAATTAAATAAAGATAATTAGAATTTTATTCGAAAA TAGAGAAGGTTTTTTTTGCAGTGCTGGTGAGCGTTGTTATTCTTTATATA TAATAAACtaacaatgtatagcaatgtgccctcctggttattaccataat ggctttatggcaactcctgaacttgggcacaggatgtacggttataATAA ACTAAGCATAATTCCAGTTCAGAACTGTTTTTTAATATCGAATGTTGCTG CAACAGAGAAATTTAGCGTTTTAGCGTTTTAGATTCTCGTAACAGTTACC TTGAAATATAACACAACTAGCATTGTCAACTGAAAACTTGGACTCATGTC AACATTTGTTTGATACAATGccatatttttctcttcttcagAAACCAAAT ACAGTTGGAAGAGGGAAATTGGAAGGAGTTGGCGCTGTCTTACAACCTCA CCCTGGCTCATCATATAACCCTGACTTTGACTCACATCAGGTTAGTTTTC AttcaataaatcaaataaaTCTGCTTgtatttttgttgttgaaactTTTC GAGGAAATTAGCAAAGACTACCCATTTTCAGGGCTTTTTAAATAAGAGAG ATCCTGTtttcttactcatcaattttaatttacaaccATTTTGATATTGG CTTGACACGGATgttgagcaagattggtcacaaagaggaaaagaaaaaca ttttttgcttatatcagcacattataacaataggcagacactgcccTGAT GTAAAACATATGTCTGATAtgatgaaacgggaacacttatgtgtGTTATT AACTTTAATATAACGGTTGGATATCGGACATTATCCAGCTTAAATTGTTG CTTGTCCAGCACCAAAATCAGAATTTTTCATATCAAGCTTTAGGTTAGGA TCATTGAAATATCGAGCCATGCATTTCTCCCTCAAGAAATTAGGAATAAA TCAAATAAGAAACCAAGTAATTGACATTTAAATACCCTGAAATGCATTGT TTTTTTACTCCTCTGTTCATCTCACCTGTACTTACTTCCTCGCTTACTTC CACTGTAAGctgaaaaaagagtttttcaGACCAGGCTGTGAGCATGTGAA TTTTGATAACTAAGgcaaaattattgaaatatcTTGTGCGTTTTTACTTG AGCGAGTTTAACTTGATTAACCAGGTagacatagtgtgcagaggattcca ccccccccccagcattcttcaaggggggggggctaaggaaAAAAGCCCCC GGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNttcaaggggggggggctaaggaaaatag cccccggctaaattctagaaacatagcccccaccttcacaaagcaaaata tcaaagaatttttgcatgcaaaattgttttcaagaggaataaaaccttcc ccacagcatagatttttaacataatttaaaatatcttcaacctatcagct cttcccccagttctattacacaacactcagcccccccccctagaaagcta gcccccagtattttttgaaaaatacagcccccaatcaagcaaaaatgatt TAGCCCTGAGCTTAGGGGGGCCTAAGCTCAGGGGGGTGCATTATATGGTA GGTCAATAAAAGTATCACTCTTTTTCTGTAGGATCTTTTGGGTAAGGCAC ACAGCGAAGAAGAAGAGAAATTGAAAGCAGCTGTCAAACTCAACATGCAA GTCAAAATGGTGTCAGTGCAACAGCTGAAAAAACAGGTAGTGACGCTGGA AAACACTGATTGAGACTTATAATTTTAGgttaacttttttttgccttGAC AGTCCTTGGTAACAAACATCATTCTAAATAGCAGTTTCTTGACCTAATGA TTCAATGATCAACGAGATATAGCCTTGTACAGGCAAGGGAAAAGTGCTTT AAGATCTTATCCGCATTTCGGAAGACGGGTTGAATCTAACGCTTTCTTCG TTTTAGTGTTGCACACTTTTTTAGAACACTGGTGATaaatatttctttca aactAGCATTTGCATTTGTATGGGAGATTCAATGTCGCGCAgatacaaaa ttttaaatatttctattttaaaGACAACTTTTGAGTAGATACCAATCTTT TAAAAGATACCTTATTGGTAAAAATACGTCTGAAAAAAGTGATTTGAAAA TCTGTTGGTGACAAAATGTTTTATCAACAAACCTTACAAGCCGACGAATT TTGTTTGTAGACGATTACTTTTCACCGACAATTTTTTACCGATAAGATAT TTTCCAAGCTGTTTTCCTTTTANGATCACTTTTCACCGACAATTTTTTTA CCGATAAGATATTTTCCAAGCTGTTTCCTTTCCAACCTTAGGGTGACATT TGGCTAAAGGAGATGTCTGAAGGGCTGAACAAGAAGAAAGGAGGAAGCGA TGATGACTCAAGTGACGAAGAAGAGGATGAAGATGAAACGAATGGTTTGA ATAGCAAACGAAAGAAAGAACGAAAAACTGGACAACAAAGACGTCGAACC AAATTGAGAAGAACTCAGGTATGTACTTGAGTAGAATGGAATTGCTTTTC TTCTACGCCAAGAAACcaagaaacgaaaaaaaaaacggtttttggCGAGG TGCTCGCTAAGCGAAACGCAGCAAGTGAAGAGATTTGGAAAGTTCAACTT GAAGGGAACTAAGGTGCATACATACAGGTATTTGTTGATTTGTTTGCAAC GGGAAATTGATGTGGCTATAGATATGCTTGGCAGTGCTTAAGTTTATACT TGAGTACGGAGATATACTGTCGAGTACTGTATTTCGCAGAAACGTCTACC accaattttcaatttaaaaagggGTGGCAAACGGCCGGTGTTTCTGTGtc aaagattacgtcataaatatcaCAAATTGCTAAGCAATATTTTATGTTAA CTCTTTTACAggaaaaagaaagatttgaagCAAAACAGTTAAACCAGAGG CTACATGATGTTTTTAGGTATGATcgtttttctctatttttgaaTTCTTA TAAGcaatttcacagtcgaaatggatcatgggtaatccaGGACTGATTGC GTCTCAATAACGGCTttctgttggctagacgcaaaaatcttcacaATCTT TCAAAACTTTAGACCAATAgtatagtaagtcgtcattagcgcacTGTGGT CTTGATTACCAATtgcgctttgcgactgtgaaatggccttgCCTATTAGA GTTTGATAAACATCATAATTAGCCAAGCCTCTATCTGCGTCTCTTAGCAG ATCTTGATTACTACAGGAAGCTTCGCATGAGGATTTACCCAGTTTGTTGA CAGTACCGCTGTGATGCTTTCCTCTATATTTGTTATGAATATCAAACATA GTGAGATTTTTAGCACGTTGGGTACATACTACGTCATCTAAACGTTGTAT TAGAATCCGCAGTCGCGttcgttttcaggcaatctgTACCAACGTATCCC TTAGCGTTTCAGTCAGTTTTTAAGGAGACTGGCGACGAAAATACAAGGGG AAATTTTCTCGATGACGGTATCGTAAATGTATATATGAGCGctcttttga aaaatgtcaaataccCTTGCAAACGAGTGATAAAGTCTTTAGCTGAGCCA TtccaatataaaaaatattttaccccACCGCAGATGAAATGTATCTCATA GCATGCAAACCATGGAAGGAATTTGCTTAATTTGTTTTGAGGCAATTATA AAAATGCCGtgcgacaaaaaaaaaaacattttccctgTAAAATTATCAGC CCCCTAAAAGCCGACAGCGATACTAAGGGTTGATAGGCAACGTACTTTTG AAGTGATTTAAATTATCAAACTCATAGCAACTATttagatggagttttta taaaagaaattcaaGTAATGCGCCCTAGAAAATTGATGTATTGGATTCTA AGGTTTGGTCCCCTGctacagtagagtctctattattcgaacatGTACGG GGAGCACAAATTTGTTCGCGTTAAGGaagtttcgagttatggagtgaGGT CTATATGGGTCATTGTTAGCTGAAGGGACCatgaaacttgttcgagttaa gagaCATAAACTTAAGACACTCGAGTTGTAAaaattcgagttaaggagac tccATTGTATCTCCAATGTACATAAATCTGTGTTTTTTGCTCACGTGAAG CACAAAATCTTGTATTTCATCCCCAGGCTGCGGACGATGAACAAAGAGAT CCGACAGGCGGAAGAACAGCACGCGTTGCGTATACAAGAGAAAGTCAAAC AACAGGAAGAGATTGAAAAGACACGCACCAAACGATTGAGCAAATACAAA TTCCAAGAAGATGGAACCACTTATCAGCTGAGTGAAGATCTGTCAGGCTC TCTGCGTGAGCTTAGGGTATGTTTGTATGTTCAATGCGCTCTTCTTGAGA AAGATCATTgtagagagattcgaattaccGGGTCGTCTATAAAAAGTGTT TTATATTGGCCCATAGCTCTGAACAtccctcaaaatttcattttcaaata acGGTCTAGAGAGTATTTTAAAAGGATTTCCCGAGAGAGGCTGCACTGTT TCTCAAAATGAGGCCCGCAAAAGATTATGAGCACTAATTTAAAAAGTGTT TAGTTTCGAAAACTTCTTCCTCATTGTTACAAATAAGGAATCAATAAGGC GAAATGAAGATGTCCTATTTATCAGAAGTAACATTAGCCCTCTGTAACCG AACTGTTTATGGAACATGTTAACCTTAACTTAGATGACTGCAATTCTCAT TGAAgagagattttattttatttttctacacAATAAGCTCTTATTCACTT CGCAGCTTTTCCTTTCCTTTAGCCCGAAGGTAACCTTATCAAAGATCGAT ACAGAAGTTTACAACGAAGAAATATCATCGAAGTTCGAAGACCTGTCGTG TAAGCAAGATTCCATTCTtaaaaaagttatatttctTGTTGAACCAAATA GTTGACTCtcactctaattcgatcttcaagggaccagggattttcttcga attaaagaaagattcgaagcacagagagtaatttaaaccaccTTCCAGCG CTGAGGAAACAAATCTTTTCGTTCGAAAcacagaaaaattcgaattatat aTGTTCGAAATAGAGAGCGTTGACTGTATAGTTCTTTGAATGTATAATTC ATTACCATAGAGGTGTGCGAGTAGAGTACGATCAATCAACTTGAGATACA CATTCACTGAGTGTGTTGCCATGGGTAACCTACAAAATCAAATTACCTTG AGTGGATGAATTTTcgtgggacttattttcgcgaatcgccCCCTTTTTCG ACAAATTTCTCATTTTCCTAACGTTTTTTGCCAAAAGTCTAGGGTCTGTA AAAAATActggtttttaaaaatttcgtgAGTAGTGAGTATTAAATAACTC GTGAAATATAATCCtcacgaaaattaatccacttgaGTTAGCTAGaaatt cttcaatttcttcGAATTGTTTCTCTACAGACCTCATCGTCGTTACAAAC GTAAAGTAGTAACAAGGCGTTCTTATCTGGCACCCACTATACGCGATTTC AACCCAACACGGAAGAAAGGAACCTAGAATCAGGTAATATAGACTAGAGT TGTTTATAATAAGTGCTACAATAAGTGAtataggtgttatatgataatgc CAAAACTGATACGGTATAATGTTAGTTTGTTACcctactctctctctctc tatttTTGATTTAGTCCTCCAGCATGATAGAGTCAGCTAATATATGATGA TTATGACaacttaaaaataaataataattttcaagaTTCCAACTTTTATC AAAGATTCttgacaaaaaataaaacatttcgtCATGCATACAACAAAACT TAAATCTCTTATAAATTTTAGGATATTCAGGCCATTGTGATAATTATTAC TGGAAACGAGACTACATCCCGACGAAGCAGACGTGTATGATGTGGTTAAT TTGCTTTGTTTCTAAACACTTTGCGGCTATCATGCCATTCTGCTGACTGT GTAAGCGTCAAGTTCAGAATGTACCTTGCCAGAGTGGGTTATTTACTTTT TGTGCTGgaatagttttttttatctgtcatattttttaaactattttatA CAATGGAGTTTTATATGAAGAATGAAAATGTGATCCTTCCTGAGCTAAAA TAAGCTCTATCTTTCAAACTGATAACTTACTACTAGCACTGCAATTAGTT CTAAGCCTCGAGAGACGACTTTTGGAATTCAAAAGGCTTGATTTCGGCTA TATctgcaaaataaattttgttaAGATGGTTGAATAAAGTGACCTGGCCA GAATATTTGGCAGAAAACCAAGAATTTTCCATGATTTCAACTTCCTCTCC TCCAAATTCCAATGGTTAAACTGGTGGATTTGGCCTACTTCAACATTGAA GTTTGAGGGGGCAAAGGAAATTGTAATACTTcaattaaaaggttttttga ccTTATTGCTAATATATTCTGGGTAGGATTCTTCATCTTGAATTCTCGTG TAATAGTATTAGATTAGGTTAGGAGACAAGtacatttcaatttgaatttg cAAGAGAATTATTGTTGTACAATGACGATGCTTAGAGGAGAGTGAAGAAA ATTACTGAAAATATACcatgaaaaaaaagag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022500TCONS_00022500Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022500-proteinTCONS_00022500-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000424supercontigsc0000424:77904..87484 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
GLTSCR2glioma tumor suppressor candidate region gene 2 protein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.86 19.66 10 9.66 69.44 55.62 52.89 55.87 50.08 47.63 55.14 58.91 56.77 58.13 46.64 56.66 43.55 43.36 17.03 18.12 40.86 38.35 41.98 38.84 47.65 47.59 17.79 18.45 30.96 30.94