XLOC_012607 (gene) - C. hemisphaerica

Overview
NameXLOC_012607
Unique NameXLOC_012607
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000421:219571..223062-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012607 ID=XLOC_012607|Name=XLOC_012607|organism=Clytia hemisphaerica|type=gene|length=3492bp|location=Sequence derived from alignment at sc0000421:219571..223062- (Clytia hemisphaerica)
ATATGGCAATAATGACCTTCATTTTTAAGGAAATATTTAGTCGCAATTTT
GCGATTCTTGTTTGTTTTCAAGTGGTCAACATGAAATCGTTTTCTGTTGT
GGTGCTGGCATGTTTGGTATACAATTTGCAAACTATCGAAGGTTAGTTGA
GTTTTGTTTTTGTCGACCTGTTCCCAAAATAAAAGAGTGCAATATAAATG
AAGTCCTGCTAGTCCTAGAGCAGTGTGTTTTCTCAACCCGCATGAAACTT
TCATGTGGAGTGTGATCTGATTTCTGGTAAATTTTAAAATCTGTTCAATG
TCTTCTGCTCCCATCTCCTTGTCTACAAGCACAGACTTGTCTGACGCGCG
AAAAAAATTATCCGCCAACAGAACACGAATGCTAATGATGTTAAGATTTC
CATTCTTGCAGGTTTGAACTCGCTTTGAATCTTCTTTTTTTTTCTTTTTT
TTTTTGAGTTTCGAATTTTTGTTTAAAGGTGGAGACATTGACATGTGTAG
GTTTAAAGACACTGGCGATAAATTCTGCTCCTTATTTGGTCATTGGTTGG
AACCAGATAGTAATGTGTGGCAGATCCGATCTACGCCTATAAGTCCAAAC
ACAGGACCGCAGAATGGTGCTGATCCTACAACTATAAGTAAGTTTTGTTT
TAAAGATATTTTTAAGAATCTAAAAAATAGCTTATATCTCTTGACCTTAT
TAAAAGTTTGTTTTCAAAACCAAAATATCGAGCCAGAGGCCCACACCTAC
TGGAAAGATTGGCAAACGCTAAATTGAGCTTTTGGCCTCATGTCAATAAT
ACAGGAAAACATGACGAAGTTAGAAAAAGTAAAAAAATAAAAGTAGATGA
TTAACACGATACGAAATTCCACATTGAGTTTCAAAATGTGCATACACGTT
TTTTTTATAAAAAAAACTATAAGAATTTAAGGCTTCGATGGCCGAAATGT
TAATAACGAGTTAAGAACATTTTAACGCTTCGTGAACTCTAAAACACCTA
ATTTCTTAGGAATATAGACAAAAATACCCCAAAAATGGTGGAAATAAGAA
CATATTAAGAAGATTTTTAGGTTTAAGACTACAAAAGTTAAGAACAACCG
AAAAAGGCTTCAAAAATTTTCGACGTTCTTATAAAAAAACGTGTATGGCT
ATGCTTGTATACATTTTGACCGTCTTTCCATAATCACAACTTCTTTTATC
CTCTCGTTTTAGGTTCTTCTGGTGACAAATTCTATCTTGTAGCTAACGGT
TTGCCTAACACACAGCATTGTCATTCGAGTAAATCAACTTCAATGAATCC
AACAACTGACACTAATGTTTGTGTAAGCTTCCTCTACAACATGAACGGGG
CCACCATGGGAAGTTTGTGTAAGTCGAAATACAATTCTTTTCATTATATT
TGAGACAAAAAAAGGAAATTCCCAACGAAGTGTTGTAACACCAGACGAGT
TGAAAGTGCTCTAACTAAGTCTAGAAGGGAAGAGTTTTAAATCTCACATT
CAATGGTAGACATAAGACCTTAGGATTTCAGGATCCAAAAAATCCCTATG
TACTATTTGAACTTTCTTCAATATTTCAGATAACGGTTTCTAATCCTCTC
TTCAGTTACTTGAAGTATTTACTTGGAAATGAATACAATTAGAAAAAACA
AGCTAGATGCTGAATGGACCTACCTGATGATGAAAGTTGGATCGCAATAC
GAGGAGGGTTGTAGGGGAAAAATAAATAGAAAGTTCTGGTCGCAAAATTC
AGTTTTATTGACAATTGAATCATGCTTGATGGTGAGCATTGTTATCAATA
ATGTTTTGTGTGAAAAAACATAGAAATACAAGGAAAAAATCTAATGAAAA
TCTGCAAAAACGGCGATTTCCGGCATTTTCAACCGAAAAAAAAATTTCTC
AAAAATCGAACTCAGCCATTTTTTGAGCATTGCGAATACGAATCTTTCTG
CAAAAAATCAGAAAAAACTTTTGATGAAAATTCGAGAAAATGTAAAATAA
CCGGTTTTTCCAGCATATTTCCGGCATTTTCGGCCGGAAAAAAATGTTTT
TCTAAAATCGGGCTCCGTCGGTATTGTCATATTGCATCAGTGTGTAAAAT
TTCATAAAAAAATATAAAGTACAGCTCGAGAAATTCAAGAAATACTGTCT
TTCCGGCAAAAATAGGTTGTTCCGGCGATTTTTAAATAGCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTTGAAAATTGAAACATGCTTGATGGTGGGCATTGCTATTAATAA
TGTTTTTGAATGAAAAAACAACCAATTGTAAGGAAAAAGTCCAATGAAAA
TCCAGAAAAGCGGCGATTTCCGGCATATTTCCGGCATTTTCGGCCGGAAA
AAAAATTTCCTCAAAAATCAAACTCGGCCATGTATTGAACAATATTAATA
CGCATCTTTGAGAAAAAAAATCAGAAAAAACTAAACAGTTTTTCCGGCAT
ATTTCCGGCATTTTCGACCGGAAAAAAATGTTTTTCGAAAATCGGGCTCC
GTAACTTTTTAGGTATTCTCATTTTACATCAGTGTGCAAAATTTCATAAA
AAAATAAAAGTACAGCTCGAGAAATTCAAGAAGTACCGTTTTTCCGGCGA
AAATCGGCTGTTCCGGCGATTTTTAGAAAGTTCCGGCTTCAAAAATCAGT
TTTATTGACAATTGTCGTGGACATTGCTATTAACAATGTTTTTGTGTGAA
AAATACAACCAATTATAAGGAAAAAGTCCGATGAAAATCTGCAAAAACGG
CGATTTCCGGCATATTTCCGGTATTTTCGGCCGGAAAAGATTTTTTCTCA
AAAATCGGACTCGGCCAAGTTTTGGGTATTGCTAATACGCATCTTTGTGC
AAAAAATCAGAAAAAACTAATGATNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGCATCATTGTGCCAA
AAATCAGAAAAAACTAATGAGCCAATCTCGAGAAAAGCTGGTAACAGACG
GACGAACGAACGAACGAACGGACGAACGGACGGACATCGGTTCATTTATA
GGACCTCCAAGGTAGGTCCAAAAAACAGAAAGCGCGGCTTTTTCAAACGC
TGTAAATTTTCATAGATCAAGTGTTATACATCACACGAAGAAGGTTTACT
TTCTCTGTTTTAAAACTTACAAAGGTACGAGCTAAGATATCCATACAGTG
TGTTTATCCTGTATTTGTAGATGTGATTCGGGAACACCCGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022483TCONS_00022483Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022483-proteinTCONS_00022483-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000421supercontigsc0000421:219571..223062 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.66	0	0.46	0.18	0	0	0.73	0.49	0.44	0.21	0	0.1	18.93	24.02	0.23	0.33	0.4	0.1	60.32	106.27	0.59	0	0	0.34	0.14	0.73	1.48	1.37	0.15	0.3