XLOC_012506 (gene) - C. hemisphaerica

Overview


Name	XLOC_012506
Unique Name	XLOC_012506
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000411:6374..12652+

gene from alignment at sc0000411:6374..12652+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_012506 ID=XLOC_012506|Name=XLOC_012506|organism=Clytia hemisphaerica|type=gene|length=6279bp|location=Sequence derived from alignment at sc0000411:6374..12652+ (Clytia hemisphaerica)
TCATTTTTACATTTAGACTCCCTACACAAGCTGCACAATTTCATATCAAT
CAGGTACAGTGTAAGAAGCGCATGTTGTAAAAGATAAAATATGAAGTTGA
CATTGCTTTTTGTTGCAGCACTCATCTTTGCAGTCCAATGTACGTATATT
TTTTTACCTGTATGTAATATAGTGTTTGTTTCGAAACATTGACACACATT
TCAAAAATTAACTTTGgggaaaaatttataattctatcCTCTTTAAATTG
ACTTTAATAGACCCTTCTAGAAAATCTAATTTCGACCAGTTTTTTATTTG
GTACTCCAATAGTGGATTGGCGACCGCCCAAattaaagctctaaaggagg
cGGGCAATAGAATGAAAACTTTAAGGTAAAATCATGTTTTTCGACGACCC
AATCGGTCTTTAAACTAAGCTGTGGATAAAAACTGTAAGAATTTTATTGC
CCATGTCTGAATAACATTAATATCCCAAGCATCGAAGATGGAGAGCACAT
GTTAAGCTCAAGTAGATTGTACAATTTTCTATTTCCAGTTATTTAAAACT
CTTCTGAGACttataaaaattaatgaaacgTGTTTCCTTCAAAAGAAACC
GTGAATGCGTAAGTTGAAGGTCCGGGGTCTCGCCGTAGATGTTACGTTCT
GAGATTTCACTCTTTCCCCGAATCTTTTCTGCGTTTCTTATTCGTGATTT
gatttacacccctgtctcacagccccgatggaactttttcctcagtgggg
ctgaaatttcagagGTGTGGATTTCATTCAAGATCCTGGAGGattgtcat
ggttacttttgccTCACCGAATGCGCATTGAATGAAATCGGGATTTGTCT
TCGCAGTATGATATATATCTTTCCAACTAAATgcataatttcataatttt
catttgTTGCTTCTGTTATCGATATATCAGGTGAGGCGAGATGGTCAAAT
AAGTTCATTCAAGATGAGAACCTTGATGATGAATACCAAGAGAGAATGGA
CGTGATGAAccaaagaagaattgaagcaattGAAAATTATCGCAAAGCAT
TTTTGGATGAAAGACGAAGAGAATTGAGaatgaaaaagttcaaaaaattc
AATGGTAAACCATTTCTTTCATATTTAAATGTTTTTCAACTTGCTCAATA
CACCGTTTCGACCGTAATcgcactttattatttaattatccccctaaatt
cgatccaatctttttttacacctttttctattgtctaggtctataggtgc
gaaaaaaagactgggacggttttagggtggtaaaatggacaaaaaatgcc
cacgtggcaattggcggctacggtcgaaaaggtgtatactgTGGTTTTTT
CTATCATACAAGAATTTCCTTATTTTCTTTGCTCATTATGATTTTCAAAG
CTCTTTCAAGAGAAGAGGAGTTATGGTAGCACTTTCCTTCTTATGAGACC
CCCCTGGCTGATTCTGAGTAATTGATTTTGAGATTTCCTTAATTTNNNNN
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ggctttttaaatgtgcgttatacagctccgctataacatattcCTGGTGT
ATACGTATAAAAGAGTCAACGCATtgggtgtttttccactgacGGCTTGG
TAAGCTAACAGGATTAatgtaatttttgataaaacgaTGAATAGCCCAAA
CTATTCataatttttgaatgaaaagagatggttgcacgttaatttttttt
ttcagaaaatattcTATTTCCCAAAACACAGGAGAAAAACCGTTAAATCT
TTTGTATTTTGCACGCATTTTCTAATTCTCTAAATACATGGTCGAGGGCA
TGTATGAGAGAACAAAAGAGCGAAGATATAAGCGGATCAGGAAATACaaa
agattttcgatttttcctGTGTTGTTGGGggaaatgaaataatttttttt
aattgaacatAAAAATGGCCGTCAGTGGAAAAAACCCATGACTGTCACTT
TTAATCGATCCTCCTTGATTAAGAGTCGTTAGCCCTACTGTCTTAAGGTA
GGAGcaccctttaaaaaaaaacaaaagaagcaTAAACAAAGGATGCGTGc
aatgaacaaaaagttttgcGATTTCAAACTCAGATGACTTGGAGAAAAAG
AGTGTATTATTACACTGTTGCTTGAAAATTGCTTGtaaaatagaaacaaa
aaagtGNACTTTAAGGTAAAATCATGTTTTTCGACGACCCAATCGGTCTT
TAAACTAAGCTGTGGATAAAAACTGTAAGAATTTTATTGCCCATGTCTGA
ATAACATTAATATCCCAAGCATCGAAGATGGAGAGCACATGTTAAGCTCA
AGTAGATTGTACAATTTTCTATTTCCAGTTATTTAAAACTCTTCTGAGAC
ttataaaaattaatgaaacgTGTTTCCTTCAAAAGAAACCGTGAATGCGT
AAGTTGAAGGTCCGGGGTCTCGCCGTAGATGTTACGTTCTGAGATTTCAC
TCTTTCCCCGAATCTTTTCTGCGTTTCTTATTCGTGATTTgatttacacc
cctgtctcacagccccgatggaactttttcctcagtggggctgaaatttc
agagGTGTGGATTTCATTCAAGATCCTGGAGGattgtcatggttactttt
gccTCACCGAATGCGCATTGAATGAAATCGGGATTTGTCTTCGCAGTATG
ATATATATCTTTCCAACTAAATgcataatttcataattttcatttgTTGC
TTCTGTTATCGATATATCAGGTGAGGCGAGATGGTCAAATAAGTTCATTC
AAGATGAGAACCTTGATGATGAATACCAAGAGAGAATGGACGTGATGAAc
caaagaagaattgaagcaattGAAAATTATCGCAAAGCATTTTTGGATGA
AAGACGAAGAGAATTGAGaatgaaaaagttcaaaaaattcAATGGTAAAC
CATTTCTTTCATATTTAAATGTTTTTCAACTTGCTCAATACACCGTTTCG
ACCGTAATcgcactttattatttaattatccccctaaattcgatccaatc
tttttttacacctttttctattgtctaggtctataggtgcgaaaaaaaga
ctgggacggttttagggtggtaaaatggacaaaaaatgcccacgtggcaa
ttggcggctacggtcgaaaaggtgtatactgTGGTTTTTTCTATCATACA
AGAATTTCCTTATTTTCTTTGCTCATTATGATTTTCAAAGCTCTTTCAAG
AGAAGAGGAGTTATGGTAGCACTTTCCTTCTTATGAGACCCCCCTGGCTG
ATTCTGAGTAATTGATTTTGAGATTtccttaatttctttttttttcaaaa
ttttagaatatATATGCTGTAATATTTGTTTATTTAAGATGACATCCGCT
CGGAAACGGAAAGAAAGAACGCTGAAGCTCTTGAAGATGTGTACGAAGAT
AAATATTTCTCCTTAAACTCCAATGTCAGAGGTTCAGTTTCGAAAAATGA
TAAACCCGAGGAAAACAAAAAGCCCGAGGAAAACGAAAAACCCAAGGAAG
ACGAAAATCCCGAGGAAAAGAAAATACCCATGGAAAACGAAAAGCCGGAG
GAAAAGGAAAAACCCAAGGAAAACGGAAA

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00022291	TCONS_00022291	Clytia hemisphaerica	transcript
TCONS_00022292	TCONS_00022292	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00022291-protein	TCONS_00022291-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000411	supercontig	sc0000411:6374..12652 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1	0.49	0.35	0	0.14	0	0.4	0	0.14	0.43	0.21	0.21	0	0	0	0	1.2	0.68	0	0	193.48	162.7	332.56	487.3	345.29	146.49	101.03	35.99	2.71	0.84

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XLOC_012506 (gene) - C. hemisphaerica