XLOC_012335 (gene) - C. hemisphaerica

Overview
NameXLOC_012335
Unique NameXLOC_012335
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000401:251543..262751+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012335 ID=XLOC_012335|Name=XLOC_012335|organism=Clytia hemisphaerica|type=gene|length=11209bp|location=Sequence derived from alignment at sc0000401:251543..262751+ (Clytia hemisphaerica)
tacgcTGTAAGAGAGAGATTAATCGAGTGCAAATATAAATTGGTAGAATG CAGAAAAATTAATTGTTCTGAAAACACTGCAAACATTGGTAACGCACTTA TTCTGTATAACTTTGATTGCAACCTTCCCCCAGCGAGGTGATAGAAAATC TTTACTTTCGCTATTGGATATAATcgttcgaaaattgaaaattttgattt tcaaagtgaagagCTTGTCAAGCCGGTAAAATAAGATTTTGTAAATAGAA ATGGGGCAATAACTTGGAAATAATCAAGGAAAGAAGATCAAAGACGCAAA CATTTGATTGGCTACACATATATTACATATTGAAGCGAAATGAAGATACT AGCAATTTGCTCAATTATATTACTGGGAATTGTTGTTTTCACATCTAGCA AACAGAGGTAGGTACAAATCAGGTATCAGTTTATCCCATTGTGCAAGCAT TACTTTGATGTCGACATAGATCTCCGGTGCCCCAcacaatacacgctttt ttataaaaatggtgtAAATCAATTTCaccatggatattcttaactttctt gggaaaatcatcctaaaatattcttacagcattcttaggttaggatctta attcagactagatttaacatttagtacagtagccaaattccatgatggtg atattcttagcattattcttaattattttgttcattttcatcatggacat tcttataaagtgtattcttataaaaaaagcgtgtattcataAACCATTTC GTTTCTGTAATGTCTGAACATAGTCTAACAAGCCGTTCGTTCGCAAGTAG TGATACAaccaactctctctaattcgaatctctattattcgaatctttct gtaattcgaactagaaTATTGGTCCCCCCGGCAGCTGGAAAATGGTTCAA ATTACTCTCTGTGATtctaattcttttttaattcaaataaaACTTTTGGT CCTTTGAAGATCATCCTTTTCAGTTCTGAGCTGAAGATCAGTCATTGATC AGCCTGAGTTTTAACAAatataacacccccttcttacttgaaaaattagc caaaaaattGTCTCCAGTGGAAAAATATACTCAGATCATCAGATaagcca atcctcactgcaaaatattatgctatttttttccatccccactgaatctt ctggctcgaaaacaatggaatccaaatccccagccataaaaacatgggaa tatcaatccccatcgagttttggtccttTACTTTTATCTCCACCAGGTGT GaagaaatcctaccgggtctgtgagaaggggatgtaatATACATATCATA ATCTCGTAAAAATATTGTcttactttcttttttcttttagaaacaAGAtc aaaaaacaatggaaaactCAAGCAAAAGGTAGGAGGACTCACAAGAAACA TTCAGTGATCAAAGCAAACTGAAGTTTTGGTGAATTATTCAGAATTTTGA GAAGGAAAAAGACACTTTATATACTTTGCTGAGACGGAACTCCGTCTGGG aaggaagaacttttaacactgaaCATTCTCTGTGTAAAAGCTTGGACAGA TACTTAAGTTGCATTTATCTTAAATATTAGAACCCCTTCAACAATTCATG AGAATTTTTCCAactataatattttgcagttgGAAATCCCTTAACAAGAG AGAATTACTAATACAAATAAACCTCTTTACACATTTTAAGGTAACAAAAG GGTGCACGCCGCCAGCGAGATGCCCGCCCTAGACACACTCCGCCCTTCGG AATACAAGAACGCAGCCGTTGCAGCAGACCATGAGATTTGTTCAACGATG GgccaaaaaatcttaaaagaaaacaataaagctaCAGCTGCTGATGCATT GGTGAGTTATTTCGATTGAAATTATGTTCATAATATACACATAGACACGA TTGTTGTAAGTCGAAATATTTCTGGTCTAGAGTCGTTAGTAATCCGTGTA ATTCATAATACAGTAATATAGGTGTTATATAATAATACGAAAATTGTAAT GAGATAATATCAGTAGACAATCATAGACAATCAGGTTACAATTAGTCCCC TTCCttttttttgaatcattttcTACAAACACGGGATTAGTCGTTCAGTA TGCTAGACTAtattttttcagacaaaaatgaattattttttgagcttcAA GGACAATGAGcaattacatcatggacccaagaGCTGATTGGatttaagtg acgtaaaattagtcaatacgtcactttcaaccaatcagctgttgggttag tgaaagacattgcaatggcgtATATCATGAATGACAGCAGTCATCCTATC GAGCAACAGAAGACCTCACAATTAtacaaaaacattcaatttaaAGTCAG GGTAAGCCCCAGAAGAAAACTTTACctaaagaaaattgtaacaaCAAGCG ATTGTAAAAAAGATAGGTTCTTAGAGACCCACGGCGTGCCTTGAACCTCa atcctttaataaataaaattttatacaaGGATTCTTCTCGTTCAGGTGAC AACGCATTGTTGTGTAGAAATAGTCCAAAGTCATTCCACAGGACTTGGTG GAGGAGGCTTCGTCGTATATTATGACAAGAGCAGTGGTAAGatttataca ttttttataagcataacgtttataagcagaGAAAATCCTTGagaaaatga agtttataagcataattatctaaaaaataagcatataaGAAGCATATTAC TGAGCTTGCTTTTTAGGTGTGTAAgtggaaaaataaattaaactGTATTT TAATTTAAAGAATACAAGCGTAAACGCGGCCATCATTCATAACTTTCCTG AAAAATCTTTGTGTCATTACTTATTTCCCTGTCCTCATGTATAGCAAcga cagattttggaaaaattggagactaaatttttcgcaaaaataagCATGTG ATAAACAAAATTTGAGCATGAgtctaaaatatttcacaatTTCACAAGAC TCATTTTTAGCTTAAATTCTACACAAGAAAGCCTCAGATTTGCAAGGAGG GGTCTAAAATAAGAAGGGCAGTATGGGTCGCAATATTAAGATCAAAATTA TCCATGTCATCCACATGGAGAGGTTGTGCAAAAACAATGCACTAAAAAGT GAGATGAGAGGATCTTTTTAGaccgaattttgaaaaaacagatcattttt gccttaaaaatggacaaaaatttataaaaaataccCCATGGACTGTTTTT TTCGTCCAAATTTACGTCCGTTCCAACGTACTATTCTAACCTTCTTCTAC TTATAGGGAATTCTCACGCATATGACTTCCGAGAGACGTTACCCTATGGT TATCAAGAATCGACAAGTAAGTTGCCCTTAAGGCTGATTGccgaaaattc acaaaaatgaaCTGATAAAATAACTCATACACTAATCCGCTATACAACAC GTGATCACACAAGCCTGCACAAAAGCCTGCACTAAAAAAAATAGCAACTA GTTCATCGCAAAAAACTAGCAAGCAAAACAAGCACAAGCCAttcaagtca aaaataaattgaacTATGTTTTTATTCTCAAACTCAGATCAAACGCAGGG AGAAACCGTTTTAGTACCTGGTGTATTGAAAGGTCTCCACGAAGTATGGA AGGATTTTGGTGAAGTGAGTTGGGAAAAGTTATGGGAACCGTGTGTCAAC CTTGCCAGAAACGGATTCACCATTCACGACTCATTGGCCAATGCTATCGA AGCGAAAGAGGATTATATTATGaagaatgaaaatttgaagtaagTTACTT ACACGCTTTCTAGAACATTGTatacccctggaaaatggctAAATCTATCt gcaaaaaaaccttgaaattttTATACCCTAAAGTGAGGGGGACGAACTTA ACTCCCTCAAGATTGTGGAATAAATTTCAACACtggaaaattataaaatc tttTCTTGGATCCCTCGGAAATCTTTCTAGAATTATCACCTGGAAATGTT TGTCCAACCTTGTATGGTCAAAAAATGGAATGGTCAAAAAATGGAATGGC CAAATAAACCCTTCGAAAACTAATTATATCtccttttttcaggattttat ACGCACCCAATGGAGTGTTATTACGTAAAGGAGATAACTTCAAACGACCT ATCTTAGCAAATACTTTTGAAAAGATCGCCAAAGATGGAGGAGCTGACAT TTTCTATGAGTAAGTAAGAAATTCTTCTCTTggctatacaccttttcgac cgtagccgccaattgtccgctttatcccactaaaaccgtcccattCCTTT tctcgcacctatagacaatagaaaaatgtgtcaaaaaaggattggatcga gtttaaggggataattaaataattaagtggcacgtgACTACTATCAGGTG TATTATGCTTAGTTGTCATTGATCCCAGACGTTTTGCTTATGGCGTTACA ATTTTTgccataaaaaatttttctagagCTTAATTTGCGTCCTCCCTCTC AGGAAATTTTTGATTGCTTGAGCATTATCGGGAACACTTCTCAGTCACAT TGTTTTCAACTGCTCTCAAAGCAGAgagtcttttttaaattttgtataGA ATTACACCAATGGAACCATTGAGGGGCTTCGAACTCTGAAGCGAATATGG ATACAGCAGCTCCCATCttgaaaatcagaaagaaaCGATTCTTCTTTGAA GTTTATTTTCAGGCTTGAAACCGAGAAATTCTTTAAAGACAGTTTTGTAA AAATACATATTAACACTTAATTCTAGGGGTGAAATTGCAGAGCAAATCGT AGCAGACATCAAAGCAGCGGGCGGAAGAATGGAGCTCTCAGATCTTAAAG GTTTCAAAGTTGAGAAAAGAGATCCATTAAAAACGACTGTCAACAAACTA CAAATGTTATCTACGCCACCACCCGGTTCTGGCGCCCTTATCTCCTTAGC TTTGAAAATTATGGAGAAATTCAAATGGTCACCCGAGAACCAATATAAAG AGCAAGATTTATTGTACCATAACATGATTGAAGCATTGAAGTTCGCATAC GCACCTCAAACGTTTATGGGAGATccaaatttcactaaaaacacAGACGA GGTAAGGGGAAAGTAATCGTAGGAGCgaaaagagagagagaaaagCTAAT GGGCGAGAGGGGTGAGCGGCACTTTAATCGTTTCCAAACAGAGCTATTAT TTTAGCAAACGCCATTTCGTCTTTGACTCTCTGCGCTCAAATTAACGGAC TAGGTCACTATCTATGTAAGGGAAAAATAAGGTGTTGGTAAACTTTTAAT CCTTCTGTGATGCCACCAAgtatttcatgtttttcatgttttgtttaatt aagtaatttccaccattatggaagcaaacgtttgAATCTACGTAGAGTCA TTTACTTACGCAAATCGCGGAACAGAAGCAACGTAActtaaaacaaaaca ttaaaacCTCCACTTTAATTATTTCAAACCTccgattgggctcttccaga aaaaatggggggggtggaggatatattgtccgggggtagcaaaaaatcat caaaatttgccttggcCGGGGTGTAAATTAATTGGTGTGTTcggggggtc agcagatgcttgtccgggggccAAAAATCACCCTGTCCGAgaggtaaatc actaaaaattgtaatatcctccaccccccatgtaaaatttttttctggaa gagcccattacgGCGTAATACCTAATaagaattttgttaaaaattatttt gaacatttttcttcAGGTTGCGAAATACATGCTTGATGACGATACAGCGA AAGAGATGTATAAGAGAATAGACAAAGAATCGCACCGTGTGGAATATTAC AAACCGTTCAGCACAGCGGAAGATGTTGCCAAAACCGGAACCACTCATAT TTCTATCTTAGATAAGAGCGGCAATGGGTGTGGTGCTACCACTTCTATCA ACGNGGAAGATGTTGCCAAAACGGGAACCACTCATATTTCTATCTTAGAT AAGAGCGGCAATGGGTGTGGTGCTACCACTTCTATCAACGCATAGTAAGC TACAATTGAATTTCCGCCTACTTAGACTAGAGTAGTTTATTATCcttgta atacagtaatataggcgttatatgataatacgataattcgATAATTGTTA CGGGGAAATTTCACGTTTTTCGATGAAATTTATTCCTGAAGGTTGAGTAA TACTTTTACTCGCGAGGATTTGAAAACTGCAAGATTTTGCTGGACGCGAG AATTTCTGACCTTAAAGTGACTgatcttttgtatttttttaatctCAACT TCATTTTTCTAGCTTTGGTTCAAAACTGCGTTCGAAAGAGCTAGGGTTCA TTTACAATAACGAATTGGCTGACTTCAGTGAATTTTGGCAACGTGTCTAC AACTTGACGTCCGATAAAAAGGTATAGAAGTTTTTCAACTTACTCTTGGC GGATGCCTAATAAACACCCCCTACCGAaagtttttgttggaaattgtacc tctAAATACCCCTGGATATTTAGAGCTAAATAAGGGACTCTTTTGAGAGC TGAACAATATTTTTTGGAAGTTTAATAAACAGGGAAAGTGTCCTACTTCC ATAATTGCAGATTCTCCCTAACTTAGGTGACTTTGATGAAGCCAGGggtc aattaatttttttttttatataggaAAAATGACCTAATCATGACTTAACA ATGAAACTGTTTCATACCTACTAGATCTTGGACAAAGCTCTCGTACCCAA AGCCACTTGCACGACATTATGATTTTATTGACAGAAGTTGGATCTATCAG ATCTTAAATAAACGAAATAAGGGACTGGGTTTAAGTTTGAAAGTGAGCCC TTTTAGTTGGATGAGACCCCCTTCCGCACTAATTGTAAAAGTAATAATAT AAAACTTTCTATATTCTTACCAGGTTCCAGGCAAAAAACCAATGTCTAAA GCGAGCCCAACAATTTTCTTAGACAAGAACAATGACGTAGTTGGTGTATT TGGAGCCGCTGGTGGATTCTTTATCCCCACTGCTCTCATCCAGGTAGGGA ATATTCAAAGATTTCGGAATAAATCAAAATCATGGTTacattacaagttt ttttttacaatataaaGAGATTGTCGCATATTTATTGTGCATTGTGCCTA ATCCTGTAGCTAAGGATTTTCCGGATTTAAGCCAAAATGTTGCCTGTGGA TTTCGGGTCAAAAATGCCTAgcacattcaaaatttttgctttctaTTTCA TTTTATGTCCAAAATACCTCAAATTAAGTATTTGAATACCATTGGTACAC ATTATAATGCCAAATAATGTCGAAAATGcctcttatttttttatttttga ttgctTTCTTAGTTCATGCTCAGTTTCAGGGCTAGGTTGCTAAGAACAAG TTGCTTAAATTTTTTGCCATTCTCAGTGCATGACCCATAGCAACTCGGTT GTCTACAAAAAGAAATGTGTACcttaaaacaataaaactactgaCAAACG CCGTATATAATACCGTAGTGTACGTTACTTTTCCAACCATCTTTCTTTTA GACAATTGCTAACTGGTTATTTTTCCGTAACAATATCGCTGTAGCTGTCG CAAAGCCCCGTATACATTGTCAACTTTTCCCACCAACTGTGGTATACGAG CCAACGTTTCCGAAAGATTTGTTGGGCCCAATCAGCAAATATAAACATGA ATATGTCACCAATAGTACTTATGATGTATCAGGTAGGTATTTTACTCTTC TAAGTTTACAGGAAACGTCAAACAACGACGTCCTGATTAGTTTTTCAAGT GCAGTCGTAGCATGCTTTTTACTAagctttctcaaaaattggagcAGTAC AACTTAAAACTGGATCTCCGGAACTAGAAGGAATAGTTAATAGTTATCAG AAAGCTAAGGATCTCCTCTTTTTTTAGAGTACCTTTGGCGCCGCCTTAAG GAGGAAGGGCAGGGTGCACGGCTGTCGAGGGGGTAAGTGAGGGTAATACA GCAGTCAGACAAGCTGCGTGGCTTCACCCTCCCTCCTTCGGTCTTGGATA GGTCAATTTGTtccaaaaactgacaaaaaagcatcaaaacaccGTCCTTC AAAATTACTACTCTCCTTTTTTCCTCATAGGTCAAATGGACGCCATTATG GGAGTTGTTCAAGCTATAGTAAGGTTACCAGGCGNATTTATTTTTGATTG CTTTCTTAGTTCATGCTCAGTTTCAGGGCTAGGTTGCTAAGAACAAGTTG CTTAAATTTTTTGCCATTCTCAGTGCATGACCCATAGCAACTCGGTTGTC TACAAAAAGAAATGTGTACcttaaaacaataaaactactgaCAAACGCCG TATATAATACCGTAGTGTACGTTACTTTTCCAACCATCTTTCTTTTAGAC AATTGCTAACTGGTTATTTTTCCGTAACAATATCGCTGTAGCTGTCGCAA AGCCCCGTATACATTGTCAACTTTTCCCACCAACTGTGGTATACGAGCCA ACGTTTCCGAAAGATTTGTTGGGCCCAATCAGCAAATATAAACATGAATA TGTCACCAATAGTACTTATGATGTATCAGGTAGGTATTTTACTCTTCTAA GTTTACAGGAAACGTCAAACAACGACGTCCTGATTAGTTTTTCAAGTGCA GTCGTAGCATGCTTTTTACTAagctttctcaaaaattggagcAGTACAAC TTAAAACTGGATCTCCGGAACTAGAAGGAATAGTTAATAGTTATCAGAAA GCTAAGGATCTCCTCTTTTTTTAGAGTACCTTTGGCGCCGCCTTAAGGAG GAAGGGCAGGGTGCACGGCTGTCGAGGGGGTAAGTGAGGGTAATACAGCA GTCAGACAAGCTGCGTGGCTTCACCCTCCCTCCTTCGGTCTTGGATAGGT CAATTTGTtccaaaaactgacaaaaaagcatcaaaacaccGTCCTTCAAA ATTACTACTCTCCTTTTTTCCTCATAGGTCAAATGGACGCCATTATGGGA GTTGTTCAAGCTATAGTAAGGTTACCAGGCGGTAAACTCAACGCCTATTG TGATTATAGGAAAGGAGGAAAGCCAGCTGGCTTCTAAGCTATAACTCCAA ATACGTTGAATATATCATTCATCAGCTCTTGAGGTAACCGAATCTTGAAT TTTATGCAAGAAAAAAGGCCCAAACATCATAGAGCAATAGAATCAAAAAC GATGGAAACAAAAGCCTTAGTGAAAGATTTGATAAAGAAACAATCTTAGA AAGATCCACACTTCTCTGGTGTTGTCATCATTAAAACTTGAATATCTCAG CTGCCAGACGAATCAGACAATACATTTACTTTACAGGTTGTAAAGTTTAg ggaaattatcaaaattagttttattgattttattttagtaGTATGGTGTT TTCTTACCTTTTTCAGAACTATATATAGtgttataataataataaaaact tATCTTATGAAAATGATACTAAAAAGTTCCATATTACTGACAAATTATAG AAACTTGTCATCAAGTTTTCTTGTTTTCTGTTGTGTGTTTTATCTGAGAT GGTAAAGGACAAAGAGTCGAAATTGTTGCTTTCACCAGAAGTTTGTTATA ATTTTTATATCGCTCGAATAAAACTCTAGCTCTTCGACATGATATTGTTC GATAGGAGCGCAAAACATAACATAGTTCTTATACTGAAGGGTCCTGGTCT TCATGCTAGTCACGTATATATCAACTATGGGGCGAGGTAGTTTAGTTCAA TTCGAAACAACCTCGCACTGACaaacaaaccaaaataaaaccatagaaca aaatcaaccaaaaaaaaataacaagctGTAACTATCTGGCCAGCTATAGT GTTGTTGGAACTATTCCAATGGAACCATAAAAACAAACATGCCGTAGAAA TTGTATGGCCAGCGAGTAAAGTCAATAATGCTCTCATGGTCTAGTCCTCA CTCAAATACctcaaataataaaaacaaccaGAAGAATGAGGTAATCGAAA GCAAAGATAAAAACAACCATGTCTTGGTTCAATATTCATATTGTTATGAA TACGAAAATTTCAGGCAAACATTACCAAATACCAAAGAAAATGAGCCGTC TTGAAATGATATATGTTGTTCGGTTAGAGCTTTTATTAAACCCTACACCA TTTAAAACAACCAGATGATTGAAATAATCGAAACCAAAGAAATGACAACA ATAAAACAGCTACCATATAATGCTCTTCTATTAGTGGTTCGAGTTTCAAC CCTTTAATGCTGACATAATCAAAAATAACAATACGAGCTGTCTTGGTCCA ATACATATGTTGTTGCTCAATTCACAGCTGAGTTTGAGCCCTCTAAATcc ataaaaacattcaaaacaacCAGACCGTGGCGATCtccaaagaaagaaaa taatatcAACAAATAACAGTATGTTACCTGGCGGAGGAAGTTTCCATAGA GTTCTCTTTTAAAGTTTGTAAGAGTTTATTAGTTGAGGCTTTATATAGTT CTTGGGTCATCGCTTCTAGAGAGGCAACNAAGTTTGTAAGAGTTTATTAG TTGAGGCTTTATATAGTTCTTGGGTCATCGCTTCTAGAGAAGCAACACGT TGTTGTAGTTCTTCTCTTGAAGCTGTATTGTTCTCGTCCTCAGTGCTGCT AGAGGATGATTGTTTCGAGTAGTAAAACTGTAAGAAAAAGTGAACAAAGC TGATACAAAGCTGATACTACAGTTGATGACgctttttaattcgtttttaa GGAGAATtggaataagggagcgtatccaGTAGTAGCGCGCCAGAGTTTCT CGTTGATggcgactttcaatattatcaattaAGAAGTTGAACAAACTACC TTTTCTTTACGTGTTTACCCGAAGGTTTAGGGAAGGCCACTTCTTTCCCT TGATTTCTCCATTTACCCTTGAGCCTTGAGCCTTCTCCAGCTCTTTCATC AAGAAGTTAGGTATCGAGTACCATTTCTGAGGTCTGTTACTTTAGCATCC TCGATAATTGGGTCTCttattaaaattgaatattttgacaGTTCAGACTA ATTCTTTAACCCTGCAGGAAACTCTCATTAACTTTCTAAATCTCGAAACT CTCTTTAATTTGAACTAATTAGATTTCCCGTTCGAGGTCGAATTAGGGAG AGTCAACTGTAAGTAATGTCTCAAAAAGTCGAACTTGTATAACTCTATTG TCTCTAAAAGTGGTAACCGTCTTTGGTCCCTTTGAACTCAACAGAAACTT TTACCTCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021975TCONS_00021975Clytia hemisphaericatranscript
TCONS_00021976TCONS_00021976Clytia hemisphaericatranscript
TCONS_00021977TCONS_00021977Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021975-proteinTCONS_00021975-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000401supercontigsc0000401:251543..262751 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.07 0.15 0.15 5.57 4.87 30.99 33.33 8.53 7.36 17.68 11.47 16.63 15.01 10.95 30.93 20.86 20.78 0.07 0.07 11.57 13.06 11.44 10.36 14.17 17.5 2.48 0.65 0.07 0.07