XLOC_012172 (gene) - C. hemisphaerica

Overview
NameXLOC_012172
Unique NameXLOC_012172
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000393:67136..72948+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012172 ID=XLOC_012172|Name=XLOC_012172|organism=Clytia hemisphaerica|type=gene|length=5813bp|location=Sequence derived from alignment at sc0000393:67136..72948+ (Clytia hemisphaerica)
CTCAAAGTGATAAACCATGTGGTAAACcctttattttttccctactaTAC ATATCTGTGTGGATATGCATTTTTGTCCCAGCAGTCAAACTTTTGAAAGC ATTAAGTTTTAAAAGGATTGTTACATATGCCAGAAACCATACATAAGGAA AATTTGATTTCTGGAAAGTCTGGTTGAGGTTGCTTGTgcagatttcaatt tttttaaagtcagGGAACTAGTCAAACAGGCTAgtgactccagaagtcat gcaactttcgttgatgtcaaaccaaatgtttcattttttcgtgaactttg aacccttgccttggaactttttttctatgtatgctaaagcgttttactaa atgaaagcccgtgatcttagctttccagcggtatataacactgtggacac gggctagacagCAAATTGGTAaataaaatgccgaacgttttacaacattt tgaaaattgtttgccgacgggagaaaaaaaatttgcaactatcgaagaac aaatgtgtctggaaacggaggaaaatgtagctattttgaggctgaaactt tgtatgtttgtttatcagaaaaagggtgaggaattcaaaaatcacaatcg ctaattctagttcttttattttcatatagtttctttaacttttttgcttc tttagcatgggaatgtcccaaaaaaaagttttttcatttctgccgaaata gattttcttttcatttggggtttctcccttcagaaaaacttattctttac tcataagtttttgttcctccatttccagaggccccttgaaaatgggtcct accaccttttttgactcatttcaaccttttccaagNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNtggggtttctcctttcagaaaaac ttattctttactcataagtttttgttcctccatttccagaggccccttga aaatgggtcctaccaccttttttgactcacttcaaccttttccaagctat tttcttcaaaaacaaaaataaaacaatgcaatgtcttcttttttcaaaaa aagacatatctttcgttattttgataaatatactaaatattttacaaata tttttatataattatattttaacaccatcaaagaattctccctccaaatt tgaggtctctagctacactagaaaaagagatatgcaatatttaagaagca tgactggaaaatttcttttttttcttttttttcttttttaacacattttt cgaatttttccaagctattttcctaacctttttttgacattttcagtcaa atttttgacactaaaatttgaatatctttacaaccactaatcctctggag gcctttgacccctcattttctttctttttcaaagctctacaagataggaa tatagattttgaaaaaaaaattaaaacttgaaaaatcttctggagttgct aaacAGGCAAGAGTTTTAAAATCACGTCAAAAAGCCAATCTCTTCTTCTA ATGTGCCAGTTTTCAGAAGGTGGCGTCGCCCCCgagatgatttttgattt ttgaaatcctGCCCCTCTGAAAAGTTGATGCGGAAGGCGGGAAATTTTTT CTACCCCTATTTTCTAAAGTAACTCTGTTCTCCCCGTATAAAAAACGCTA CATGGAAGATCTTTCATATTTAGTATGTGTACagacaggctagctctaaa gctcacAAGAGAACCCTCGAACGGATAAAATTACTGGCACATATTTTAAT AATAAAACCACATTTTAGGTAAATTCAACGTGTTTTTAGtaatttcagtt aaattaaataaatttattttagataaGTAATTGATATGGATGGTAATCTT TAAATACTTTTATGGTCTTGTAAATACACTTGAATATCCTGCTTCAAGAT CACCGTTTTCCCGAGGTGGACTGCGTGCGTCGCTCGCTTTCTTGACTTCA AAATTATGTTCTCTGGATACCTTGTTAAtcttgtttaagataaaaactgc aattatcgCTCTTTTCAGAAATTATAGACCTTtgcgcctttccatccgcc atattgaattgtatgcaaaaattatggtggccgaattgccgtggtgaaat tctcttaagaaagtatgcaaaacatatgcaaaaagaaagtattaaataaa aacttgcatGCATAAtttgcattatattaaagtgtaatcttgtagaagaa agattaaatttgcttctcttgaaaactaaaaacaattatatttactcatc tcttagaacaagcacttcaaaagaccataacattagacagaaactcaaac tgaaaaatcacctgcaaaggtaaaaaacaatccttattcggctgacggca aattattctcctgggaatagagtcgccaaatgatcaaatcaaaacattga taaagtgtgacgtcataattactgctttcagtttgcgtgttttgaaagtt tgatgtgtgtactcCGTCTTCGTGGAATTTTTTAATGGttctttaagaac aaattcctaaaaggcttttgttgttctgtaaatatttccttttggattaa gaaattccatcttttattgttctaatgattataatatttatttataagat gctttgttgtctttttaatctttgtgtaaacttgcatatgttttgcatac atttcAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTTTTGCATACATttcaactaaatccaaccacg gcatttttgttcctgtatttttgcatacaattcaagatggcggacggaaa ggcgaaaaggtctattgccgaaaacggcaatttttttaacaatgaaatgc tgaatcagcaaaatgtgttgtccttttaagggcaaagatgtcaaaggtgt ttgaaaatagtaaaattgcattgagaaaaaggtttttcagattaaaagtg attttttcaatttttcgttgctcaataatatgaaaagttctaaaataata agtcaaaagatcctgcatcgatgccgaaacacagccagaaagagataaca aaacccctgttgtaaatttgtttacatatgactcgattttgctatctgca tttccaacaaaagccagttgaaaacataacaaaactaaacgaggcacagt gggcctacttattGCGAgtgtgtcaaataccacgtgtaataatttccaaa aagagcaataattgcagtttttatcttaaacacccgactgctCGCTCGTT CCTGCTTTCGTCTTTATGTCACAGAATGTCTTCACCTCCAGTAAGtataa aactttatatattttttgtacaaaatgtttttcattagAGTATTATGTCA GTACAGTGTATCAAAAAATCCTGTGGGTTGGTTTTTCTGACCTTATTATa ctcttttttttcaatgtttaatTAGCAAGGGCAGCTTTATTGGCCCAGTT AGCGAAAAAGGCCTTCAAATAGTGTCTGTGGTATGTGGTTTGTGGTTCGG TTCGCCAAAAGTTTTTGCAATAACAGCGTCTTGattgttttttcaatttc ataattcttgatagacagtgatataccttttggtaattagttcttacaaa gtaaacaagggacgccgtacaatatgagcatattcatttttcttataagc atttaatctataagaatcaaatcaataactcttgatagacagtgatatac cttttggtaattagttcttacaaagtaaacaagggacggcgtacaatatg agcatatttatttttcttataagcatatactttataagaatcaaatcaat aactcttgataacaTTGATAAACCTTTTGgtaattaattcttacaaagta aacaagggatggtgtGCAATATtcgagcatatttatttttcttgtaagca tatactttataagaatcaaatcaataactcttgatagacagtgatatacc ttttggtaattagttcttacaaagtaaacaaggtacggcgcacaatatga gcatatttatttttcttataagcatatactttataagagtcaaatcaata actcttgataacgTTGATAAACCTTTTGgtaattaattcttacaaagtaa acaagggatggtgtGCAATATtcgagcatattcatttttcttgtaagcat atactttataagaatcaaatcaataactcttgatagacagtgatatacct tttggtaattacttcttacaaagtaaacaagggacggcgcatgCTCTCAG GTTTTTGCTATCTTCATTGTTGATATTTTGTAATTACAGATTCAGATAAG AAATGGGTGAAACGATAGAAAGCGTAAACcaaccaaaagaaaaagaattg atatgTACAAAATTTCCAGCTGGTAAAGTTGAATGTACCAATGATAGCTC TACCGATAGTGAGGATGCTCAGATAGTACCAGATGTTGACCATTCAccat caaaacaaatcaaagatgATCATAAAGAGGGCGTTTCCTCACCTGAAGGA AATGTTGAAATGTATAACATGAAGTGTGATGAAAAGGTTCCCACAAAAGA CTGCAAGAATGAGCAGGTCAATTTATCAAAAAACATTGTTACATCTAAGG ATCATCAAGAAAAAGATTGTGGATTAAAAAATACAGATGTTAAAGGCCAA GATTTTGAGCAACCAATAGATTCATCTGACAAGTCCAAGGAATTGAATTC TAAAAACACTAGCAATGAAACTTCAAACACTGATAACATTTCTTCTAAGA ATTTGTTAAACGTTACATCAGATATAGCTAATAATTCTTCAGAAGGAATG GACAAAAAGCCTGAGGAAACTAGTTCAAAGCAAGGAAATGTGAATGAGGA TGCTGTAAAAGCAGAACCAAAATTTGGATTGACTGTTGAAATGATTGAGG AAGAAGAAAAGTTGAAGCAAGAACAAGAAAAGCAGTTagatgaaatcaaa aataagGTCTGTTTAAATAATTCTCTATTATTAAACATATCTAGCAAAAA AATGCTGCAATTGAACGAGTTTTTGAAGCAATGTCTATGAATAAGGTAAA CATTTTCGTTCACTGGAACTGAAAATTTTGTCTGAAAATAGTTGGTGGTT AAGGGCGTTAAGTGTTATTTTAACttatattgaattttgaagcaACTTGc aggattttgcaattttgcaattTGTTGTTGAACATTGCTGCAAGAATGGC TTTTGGAAAGCTATTAGTTTTAATCTTAAGCCATCTTTATCTCTAGGCAT TGCAAGAGCTAAACAGCACTGGCCAAAAGCAAAGGTTTGATCGTCTTCAA GTACTATTAAGTCGTTCACAAATGTACTCTACATATATTTTGGGTCGTTT AAATTCACGAAGAGAAGCAGAGAAAAAGAGGCTTGAAAGGGTAGATaaga atgaaaagaagaaaaaagagttcgaaaacaaagaaagcgacCCTAAAAAT GAAACTCAAGACAAAGAGGAAAAGGTAAACATTTCTTCGACGAGATTTAC ACATACTTATCATTATCTCTGGCTTAAGTTAGTTATTTTTTCTCATTGCT TGCCAAATGATGAGAAGAGTTGTTTTGACTTGGTAAATGACCATGTATGA AACGATAAACACACTAATCTTCTCTCTGATGGCCaaaaatggaaacaaaa aaattcctaGATATTACCCCATGAGTTTGTTGATAAAGAAAGATCTGCTT CACAAATGAACAGCTTCATTGCATTCTATTAAAGGATTCGAAAGCAGATG GTGAAAGTAAATTTTCAAGaggaaaacgaaaaagaaaatctcTTCCAAAA GATGAGCAGGTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021686TCONS_00021686Clytia hemisphaericatranscript
TCONS_00021687TCONS_00021687Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021687-proteinTCONS_00021687-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000393supercontigsc0000393:67136..72948 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.54 6.53 3.4 2.15 8.31 6.74 7.78 9.94 5.07 6.88 5.25 3.55 4.97 3.96 5.92 5.2 9.7 9.73 0.94 1.71 6.68 6.47 10.26 10.08 17.2 22.07 1.92 0.99 7.31 9.22