XLOC_012135 (gene) - C. hemisphaerica

Overview
NameXLOC_012135
Unique NameXLOC_012135
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000391:213209..220591+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012135 ID=XLOC_012135|Name=XLOC_012135|organism=Clytia hemisphaerica|type=gene|length=7383bp|location=Sequence derived from alignment at sc0000391:213209..220591+ (Clytia hemisphaerica)
GGGTGAGTTTAATATTATTTGATCGTTTGTTTTTATGTCGGTAAGTAAGG
TTTCAGGAGGGGGATGGATAACAATTTGCTTTATGCTTTATGAATTTTAG
AgttggatgaaaattttttaaatggtgCATGTTGAATGGCATGTTAGATG
CAACTGAAAGgtatgaatttttatttttactattttttgtctgtttataC
CTATTCTTGTTAAGTGTGAGTTGaggtatatatatttttatattcgTTTT
ATTCGTCTGAAAGAGAGATACGGAAGGGGGGTGTTTATGGTTTATTGACT
TTAGAATTATGGATAATTTCGACCATATGACAGCTTCagtaaaaacaaga
taaaacttaatccgaaaattgattttgccatGGATCAATGTGGAGTCAGA
TCACAAACAACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTTT
GTTGTGAAGCGAaatattagttttttcaaaaaatgaaaattttgttgttt
gtgatctGACTCCACATTGATCCatggcaaaatcaattttcggattAAAT
TATGGATAAAATATGATAAATGTTGCAAATTGAGTAGAGTGGTGAATGTA
ACTAAGAGGtatgaaattttatttcaaatgccTATGGTATTTTTTGTACC
TTGTCGTCAAGCGTGACTACtacgtgtttttatttttgattattcATTCT
TTATTTTGCATTGGAGGTTTGAGAGGGGAGGTAGTTAACGATTTATTTTC
ATTCTATATTAATTTTAGAGTTagataaaatattatatatgTTGCAACTT
GAGTGTTGAATTCAATTAAGAGGTatgaaatttaatttcaattgtttttg
gTCTCTTTGTACCTTGTCGTCAAGCGTGACTACTACGTATTTCTacaggg
ggggtcagtgtaccagaaggtggcatgtatcctggggtgggtgggtgttt
gagaaaaaaatttgtcatgtactacctgtgtactataattggggtgttgg
gtccaaaaatgattttgatttttactacctgtgtaccaaaataggggtgt
tgggtccaacaTCGAttctgatttttactacctgtgtaccaaaatagagg
tgttgggtccaaaatcgattttgatttttactacctgtgtaccaaaataa
aggtgttgggtccaaaatcgatatCAACGGTATGGAAACAAAAAGGCTCA
GAAATTAtttgctaaaatagaaatgtaaagttgttctattataaattgat
caagccaagtttgtccaagatcattcttccaaacttttttgaattaattG
AAATCCTACCAGATCCCACTAAAATGAAGGTTTAgagtcaatgtaaacat
tcgagCATTGTAATTCAAACATTCGAACAtcagaggtgccaactctcacg
cattgagTGTGAGACTCAAGCATTTCCCCATggtctcacgcaatttttga
aaagtttgatttctcacgcattttggattttttaaaagaattttcctgtt
tttccgatttttggaaaaaagttttcccgatttgacgattttccgaaaaa
agtttccccgatttcctgatttttggaaaaaatgtttacccagttttcag
attttttccaGGTAGTAACCGGTAGTAAatggggggtatggggtggtttt
gttttttttacaggtACTACCTGGTAGTAAATAGGGGGTATTGggtggtt
ttgggatttttccatgtagtatagtgtacttcaggggtgggtgggtgtca
agttttgaaaaataccttgtagtacacatacatgccgcCTTCTAGTACNG
TAGTATAgtgtacttcaggggtgggtgggtgtcaagttttgaaaaatacc
ttgtagtacacatacatgccgccttctagtacactgaccccccctggTTT
CTATTATTTAGATTattcattctttattttttgcatGGGAGGTTTGAGAG
GGGGTGTTTAACGATTTATTTTCATGCTATATTAATTTTAGAGTTAAAAT
ATATAATATCATAAATGTTGCAATTTGAGTGGAGTAGTGAATTCAACTAA
GAGgtaagaaattttatttcaattgcTTATGATTTGTTTGTACTTTGTCG
TCAAGCTTGACTGCTATGTTATTTGATTTTGAGTATCCATTCTTTTATTC
CACAAGATAGATTTTAGAAAGGGGATAGTTAAcgatttatttttattctt
tatgaatTTTAGAGTTTCATAAAACTATAAGAATGTCTCAAgttgaatgc
aatggtggaagtAAGAGGTACGATTCTTTAtgttcaatttcaaattcaag
ttgaatttttgttgttctgtttGTATCTTGTCTTTTGACGTTGACCTGTC
TGACTTTTTATTACCTATTATTTTTGTCTGTAAGGGTGGtttcagatttt
tcagatttttcggATATGGATTGGTTTTACCGATCCTCCTTTAGTTTTCT
TAAGATTGAGTCGTGTATTTGTTTGACTATTCATTCTATACGTCGGTAGG
GATAGTTTCAGGAGGGGACAAGATAACAATTCGCTTTCATGCTATATTGA
TTTTAGAGTTAGATAAAGTATAATGTTGCAACTTGAGTGCAGTGATGAAT
TCAACTAAAAAGTatgcaattttatttcaattggTTATGATCTGTTTTTA
CCTTGTGCTCAAGCGTGACTgctatgttttttcttttattttatctattc
TTTTATTCCGCACGATGGGTTTTAGAGGGGGGATAGTTAACgatttattt
tcattctttaCCAATTTTAGAGTTTTACAAAACTACTAGGAATGTCTTAA
gttgaatgcaatggtggaagtAAGAGGTATGGTtctttatgttcaatttt
tgttgttttgtttgtaTCTCGTCTTTTGACGTTGACCTGTCTGACTTTTT
ATTACCTATTATTTTTGTCTGTAAGGGTGGTTTCAGATGTTTCAGATATG
GATTGGTTGTTACCGATTCTCCTTTAGTTTTCTTAAGATTGAGTCGTGTA
CTTGTTTGACTATTCATTCTACATGTCGGTAAGGGTAGTTTTAGGAGGGG
ATTAGATAACAATTCGCTTTCATGCTTTATGAATTTTAGAGTNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGGTGCATGTTGAATGGCA
TGTTAGATGCAACTGAAAGgtatgaatttttatttttactattttttgtc
tgtttataCCTATTCTTGTTCAGTGTCAGTTGAGGTATTCATATTTTTAT
GTTCGTTTTATTCGTCTGAAAGGGAGATACGGAAGGGGGTGTTTATGGTT
TATTGACTTTAGAATTATGGATAAAATATGATAAATGTTGCAAATTGAGT
GGAGTGGTGAATGTAACTAAGAGGtatgaaattttatttcaaatgctTAT
GGTATTTTTTTTACCTTGTCGTCAAGCGTGACTACtgcgtgtttttattt
ttgattattcATTCTTTATTTTGCATTGGAGGTTTGAGAGGGGAGGTAGT
TAACGATTTATTTTCATTCTATATTAATTTTAGAGTTagataaaatattg
taaatgtTGCAACTTGAGTGGAGTGTTTGAATACAACTAAGAGgtaagaa
attttatttcaaatgtttttggTCTGTTTGTACATTGTCGTCAAGCGTGA
CTACtacgtgtttttatttttgattattcATTCTTTATTTTGCATTGGAG
GTTTGAGAGGGGGTAGTTAACGATTTATTTTCATGCTATATTGATTTTAA
AGTTAGATAAAATATAATGTTGCAACTTGAGTGCAGTGATGAATTCAACT
AAAAGGTATgcaattttatttcaagaatGTCTCAAgttgaatgcaatggt
ggaagtAAGAGGTATGGTtctttatgttcaatttttgttgtttctttgtA
TCTCGTCTTTTTACGTTGACCTATCTGACTTTTTATTACCTATTATTTTT
GTCTGTAAGGGTGGTCTCAGATGTTTCAGATATGGATTGGTTTTACCGAT
TCTCCTTTAGTTTTCTTAAGATTGAGTCGTGTATTTGTTTGACTATTCAT
TCTATATGTCGGTAAGGGAGGTTTCACGAGGGGGCTAGATAACAATTCGC
TTTCATGATTTATGAATTTTAGAGttagataaaataaaacaattaaaagT
TGAATGGAAATGTGGATAGAAGTAAGAGGTATGATTctttttatgttcaa
tttctttgttttgtttggaTCTAGTCTTGATGTCTTTTTCAGAAGATTCA
TTATTTTGTCTGCAAGGGAGGTTGCAGAGGGGGGGGGGATGGTTACCGAT
TTGCTTTCAAACTTTATTAATTTTAGACTTAGAGAAAATATTATGAATGC
TATATAAGTTGAATGATATGGTAGATGCAAATAAAAGGTATGagtcttta
ttttcattatctATGGTATGTTTGGACCTAGTCTTTTTGAGGGTGAGTTT
AATATTATTTGATCGTTTGTTTTTATGTCGGTAAGTAAGGTTTCAGGAGG
GGGATGGATAACAATTTGCCTTATGCTTTATGAATTTTAGAgttggatga
aaatttttttaaatggtgcATGTTGAATTGCATGTTAGATGCAACTGAAA
GgtatgaatttttatttttactattttttgtctgtttataCATATTCTTG
TTAAGTGTGTGTTGAGGTATATACATTTTTATGTTCGTTTTATTCGTCTG
AAAGGGAGATACGGAAGGGGGTGTTTATGGTTTATTGACTTTAGAATTAT
ggataaaatattataaatgtTGCAACTTGAGTGGAGTGTTTGAATGCAAC
TAATAGGTAAgacattttatttcaaatgcTTTTGGTCTGTTTGTACCTTG
TCATCAAGCGTGACTACtacgtgtttttatttttgattattcATTCTTTA
TTTTGCATTGGAGGTTTGAGAGGGGAGGTATTTAACGATTTATTTTCATT
CTATTATAATTTTAGAGTTagataaaatattataaatgtTGCAACTTGAG
TGTAGTGTTTGAATGCAACTAAGAGGtatgaaattttactttaaaagctt
TTGGTCTGTTTGTACCTTGTCATCAAGCGTGACTACtacgtgtttttatt
tttgattattcATTCTTTATTTTGCATCGGAGGTTTGAGTGGGGAGGTAG
TTAACGATTTATTTTCATTCTATATTAATTTTAGAGTTagataaaatatt
ataaatgtTGCAACTTGAGTGGAGTGTTTGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021642TCONS_00021642Clytia hemisphaericatranscript
TCONS_00021643TCONS_00021643Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000391supercontigsc0000391:213209..220591 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.03	0	0.12	0.13	0.02	0	0.08	0.04	0.05	0.15	0	0	0	0	0	0	0	0	0	0	0.19	0.47	0	0	0	0