XLOC_012084 (gene) - C. hemisphaerica

Overview
NameXLOC_012084
Unique NameXLOC_012084
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000389:102817..108181-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012084 ID=XLOC_012084|Name=XLOC_012084|organism=Clytia hemisphaerica|type=gene|length=5365bp|location=Sequence derived from alignment at sc0000389:102817..108181- (Clytia hemisphaerica)
CAATCTAACCTGCTTAAATGTTTTGAAGATGTTGCAGCAGGTAACAATGA CTAATAGTTTCTCCCCTAAGATAAGATAGATTGTCCTAGAAATGTTTTGA GCAGATTTTTGAAACCTAAATAAACTTATTTAGTGTCAACATTTTCTTGA TATCAGCTTCCCAAAATCTTTTGATATCTGCTTTTTTTAAATCTACTTTT TTTAAGTTTGGTTTTGTACCGGGTGCACCATAAATATAGAAGTATAAAAA GTATTCTTTTTTCCAATGGCTAACTCCACCTATGCCCATTGTTTTATTTA GTAAAAATGTCAATAATACAATCTGAATGAATTTCTGAAGGCAATAATGG CACTTTCAAGAAAAGCCAAACAAAAAGGTCTTGAATTAATGAACAGAGGT CGAACCAAAAACAATCATTCATCATCAGATGCAAATGAAGCACCAAAGGA TTGTGTAGTTTGTTTGGATAAAGTGAATGTTAGAGGTGTCATCATTTGTG CACACTGGTTTTGTTTTGTTTGCATTCATGAGTGGTCAAAGGTAAATAGA TATTTGTTGACACTTTCATCTTTCGTTTCTTCCTTGTAATGCATAGTAAC AATATAGAAAGAACAGAACACAGCTCATTTAAATGAAAACCCTTGGACAG ATTTTCTTTGCTTAGTTCAGACCCCCCCCCCTTTCTTAAGGGTGAGGGGT GACACCTTCCACAAAAATGAGGAAGGGGGCGGTCAGAAATTTTCATGAAA AAGGGGGGGGGATAGTTTAAGAAGGAATTTTATTTTTCCTAAACCATTCA ATCCATACAGTCAATTTATTTGTATATTTTCACTTTTTTAGAAAACAAAT ACTTGCCCACTGTGTAAACAAAGGTTCCGATGTATTACAAAGGTATTGCA ATTTTTATATTTGTATTAATTGATTAAAAATGAGACGTGTATATTTTGGT ACTCAGAGTTTCATGCCGCCCGTATTGAGGACAATTATCAGCCAAATAAA TTACGTTTTTTAAAAATACAAAATTCAATAAGGTATATTTAATAATTAGT GTATAATAATGGTATTTATAACTTATATATACAGACAACGCTAAAGACTC TGGGTCAAGTGGGATTTTAAAATTGAATTAGAAAATACCAAATATCTTTT CTTTACAGTAAATAATTCTTGTTTTCCAGGTGACAGTAGGTAAACCTTAC ATTCCCACTCAAAAAGTACGTATCAAGGACAAGAACCAGAGTAACATCAG TTTTGCTGAAGACGATTATGAAGTAGCAATGGGTCTAATTGCAGAAGATT CTTTGTCCGAAGACACCGATAATGACCCTGATGAAAGCTTCACGCCAAGT TACAATATTCCCACTGTCAGAGGTCGAGCCATCAGATTAAGATCAGGTCG AACAACATCTACAGCCTCATCTTTAATAACAAATTATACAACCAGACATG CACAACTTAGTAGTAGCGATCAGCGACAACAGAGCTCAAGGGAAAGACAA ACCAGAGCTGCTAGGAGACAACAATTGACAGAAGAGCAAGAAACAGATGC TTCTGAAGATGAATTTGTAGCTCCTCTTGATAACGATGATGTTAATGATG ACGATGATGCATTTGAGGAACCAAGTGCAGCTTCAACAACAACTTCAGGT TTTATTAAAATGTTTTATGTGGTATTTTTGCTAGCATACATTTCCAAGTG TTAGACTTTATGTATTCAAAATATTATAATTCTGCTGTTTGTACAAATCA TACCTTACTTATATCATAATATTTTACTTTCGTTATTTTCAGCAGTTAGG CAGGATGTGCAGGATTTACCAATAAACAATGACAATGAGAGCGATTCAGT GCAAAACAGTTCCAATGATGAAGCAGAAGCTGTAGAAGAAGATAAACATT CCATTGAAACTGTTTCTTCGCAATCCAGGTATACGTCCCTTTTCATTAAT ACAAAGCTCCTAGAAAGATTTCAAGACAAATTTTCTTTTTAAATTATCCA TTGGTTTTTTCTTGGTAAAGTGACTGCTAGACTGTCGTGATTTATTTTCA GTCAGCTTTCAAGTTAATTGAAATTGTCCATGTTTTTTTTTCAGCTCAAT CTTAATTTCTTCAACAGTAATAAAGCCTCCCAAACGAAGAAAGAGTAAGA ATTTTCTAAAATTTCATTTTGTTTTAAGTTTGTCTCACAGAGTTTCTTGA TTGTAGACTACCTTATTGGAACTAATTTTCGCGGGAACTAATTTTCGCGG TCGGAAAAAAATATATCAGAAAAATTGCATTTCGCGGGTTCTAATTTTCG CGGTTTTTTTCATTCTGGAATTTTGGCGGGTTTTAATTTTCGCGGTTTTG CCCTTTTTTGGACAAATTTCTTTCATTTTCCTAGGGATTTTTCAAATTTT TCAATAAAATTGGAAAAAGCTGTATTTCGCGGGAATTAATTTTCGCGGCT TTCAACTCTCAAATTTTTTCGCGGGATCAAATTTTCGCGATTTTGACGAA AAACTGCGAAAAACGCTAAAATTAAAACCCGCAAAAATTAGTTCCAATAA GGTAAAGCTTGTCAATTTTGGGTTTTTGGTTTGATTTGCATGCTATGTCT CACTCAGGGCCAAAACGTCTCTTCTCTTCCTCTAAGCGCTCAACTGAATA TTGCATTAGTTTGGCCAAAGTTGTTAGGCAAAAAGTTATGGTGGCTAATG AAGCTATATTTTTACCTTAGGAATGGTTTTTGTAACAATCTACCGTTTTG TCTGTTGTCTCCAATTGTCTTTAAAATTCAAACATCTTTTTCAAATATTC AGAGCGTAAAAGTATCAGATATTGTCCAAAGGTTGACAAAAGAAGATCTT CAGGTTCGACACGAGAACAATGGATTGATATGAGTCACAAACAAACTACT TCAAGAACAAGGTCAGAATTAAATTTTATTCAATGTTCTGAGTATCCAGT CTTCTAATCATACTAAATACCTGGGAATGGTCGATTTCCCAACAATGACT TTGTGGAATGATAAAAAAGCCGGTCAAATTCTTTTCATTAAAGAGGATGA AACGTTAATTTTCAATTTTCTACCTCTTAAGTTATTTCCAGGTTATTACT TTAAATTATTGTCTTTCAATCCTTGTCTTCTCATTTTCAATCAAAGTAGA ACTATAAAACCAAGGAGACCAAGCATCACAACCCCTTCAACCTCATCCAA TTCCAAGAAATATCCAAGTCGTGTCGGTCGAGATCAAGCAATGGAGAAAA TTAGGAGACAAAACAGAATGGTTCAAATGTCAATGACAACATTCGTATCT CAATATTCACCAGAGAATGAAGAACAAAATTCATCCAGTGAGGAAGATTG CGAATCTTCTGAAGAAGAAGATAGAACGGAATTAGAATCAAAAGATAGTC ATGATAACCAACAAGGCTCTTCGAGGAGAGGAGAGGAGTTACCTGGTAGA AATGTTGCGAGCTCTAGCAGTTGTAAGATTGCAAATGATATGAAAAAACG CATAGAAGTATTACTGTCTTCAGATGAAGATCAACACTCTAATAATGAAA ATTCCGACGAAGATCTAAGCATGATTGAGCCAGTTACTACAAGATCAAAA CGACTTAAACGTCTGCAACTTTTACCTGACAGCAGTTTCGAACAAGAAGA CTCGCCTGTGCGTAAACCTCCCCCCAGGAAATGCAATGAAAAGAAAACTA TTTTAACATCAGATGATCTAGCCTCACCTATTCCACTATCAACACATTCA TCACCAGCAAGCAATACAGCCATCACAAGATCTTCAGAAAATAAGAGAAA ATTATGTGATTTTGAAATAAAGTTTGATGAAAGTTCTGAAAGCACGGTGG AGATCACACACCCTAAAATATCTGATCAACATAAGACAACACCTCCTAAG AGACAATACAAATTCCGCAAAATCAAACATGATGATAACAATGAACCTAA AATGATGGCATCTGGGAAATCGGGGATTTGCACAACAAGACCTTCTTTAT GGAGTACTGTGAATGACAGCAAAGAAAACAAACTTGCAATAGAATCATCT TCCTGTTCCAATATAATTTATTCTGGTGTAAACCAAAGTAAACCTTCCAG TTCCAGAGATGCTAGCTCTTTAAAAAACAAAGAGAATATAGTGACCAAAC TGGATAACAGAGGGAAAAGCATCAATATTTCAATTCAAGATGATTCAGTC CAGGATGACTGTATTTTCGCGTCTGTTTTACACACACCATCGGCCGTGAA CGACATTCTTAATGATTTCAACTGGGACTCGAATTCACTTGACGAGACAG TATCTCCATGTGTTTTATCGCAAAAGTCAACTTGTACTGATAGAGTTGCA ACCACTCCAAAGGAAAATCCAAACTCATCCAAAACAGGTAGAAAGTCTAC AAATTGCATAGAGGGACAAAAGAATTTCGAAACCTCCACGACTTGTAGAA AAACTATAATTGAGGAGACACCTCTGAAAGATATGGTTAAGAAATCTAAA GCTGATATTAGTCCTATTTCACCGTTTGGAGATAAGAAAGCATTCAATTT TCGAAAATTCAGAAGAACTTTCCGCCATTATAGTCCTGTTTCTAGAGATT CAATTATCATTTGTACCACTCCTTGATGGTATTGGCTTTTGATTGTTTCA TTAATTTATTGTTTGACTGGTTATTTGGATGTTGCTTTGTTTGAGAGTTC CTTGAAAATGTTTTTCTATGTAATTATTTTTTATCCATTGTAATTAATAA AATACTAATTTAGAAAAGTTATTTATTTGCTGAATACACGCTTTTCTTTT ATAAAAGTGGTGTTTTTCATTTCATCATGGATGAAATTAATTTTCTGGGG AAAATAATCCTAAAAATCTTCTTACAACATTTTTATAAGTAAGAATTGAA CATGTTATACGAACCTAAAGCATAACATGGCATTTTTGTGAAAGAAGGTA ATTGGTAATTTATAGTTTTAAAATGTTCTAAAAATGGAATTCTTGGCATA TTTTGCCAAATTCTATGTATGATCGTGATATTCTGGCACATTCTTAATTT TTTGGCCAATTTTATCATGAATATTCGTAAATGAGTAAATTATCAAAGGA AAAACTCATTCTTCGACCCAAGTTTGACAAGACCTAGGTCGAAAAAACTT GTAACTGGGTATTTTGCCAGAACTGTTGAACAACTTCTTTCTTAAATTTG GTCGGTCTTTTAATAAAAGTTGCAAATACCTTTGTAGCTTTTGATGCAGG TCATTTTGTCAGTACTAAATCTCCAAATGAAAACTTTGTAGATTTGTCCA TGGTAGAATTTATTAATTTGTCAGCTGATATTTATTTATTCCTACACAAA ATTTCAAAAATGTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021554TCONS_00021554Clytia hemisphaericatranscript
TCONS_00021553TCONS_00021553Clytia hemisphaericatranscript
TCONS_00021552TCONS_00021552Clytia hemisphaericatranscript
TCONS_00021551TCONS_00021551Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021553-proteinTCONS_00021553-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000389supercontigsc0000389:102817..108181 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.69 10.51 6.8 5.88 20.84 15.9 13.58 13.96 9.47 11.43 8.55 6.83 5.59 4.97 5.79 7.26 8.3 8.11 4.32 6.03 6.99 6 17.6 17.82 8.13 9.25 6.6 5.66 14.24 16.07