|
|
Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00021553-protein ID=TCONS_00021553-protein|Name=TCONS_00021553-protein|organism=Clytia hemisphaerica|type=polypeptide|length=829bp
MALSRKAKQKGLELMNRGRTKNNHSSSDANEAPKDCVVCLDKVNVRGVII
CAHWFCFVCIHEWSKKTNTCPLCKQRFRCITKVTVGKPYIPTQKVRIKDK
NQSNISFAEDDYEVAMGLIAEDSLSEDTDNDPDESFTPSYNIPTVRGRAI
RLRSGRTTSTASSLITNYTTRHAQLSSSDQRQQSSRERQTRAARRQQLTE
EQETDASEDEFVAPLDNDDVNDDDDAFEEPSAASTTTSAVRQDVQDLPIN
NDNESDSVQNSSNDEAEAVEEDKHSIETVSSQSSSILISSTVIKPPKRRK
KRKSIRYCPKVDKRRSSGSTREQWIDMSHKQTTSRTSRTIKPRRPSITTP
STSSNSKKYPSRVGRDQAMEKIRRQNRMVQMSMTTFVSQYSPENEEQNSS
SEEDCESSEEEDRTELESKDSHDNQQGSSRRGEELPGRNVASSSSCKIAN
DMKKRIEVLLSSDEDQHSNNENSDEDLSMIEPVTTRSKRLKRLQLLPDSS
FEQEDSPVRKPPPRKCNEKKTILTSDDLASPIPLSTHSSPASNTAITRSS
ENKRKLCDFEIKFDESSESTVEITHPKISDQHKTTPPKRQYKFRKIKHDD
NNEPKMMASGKSGICTTRPSLWSTVNDSKENKLAIESSSCSNIIYSGVNQ
SKPSSSRDASSLKNKENIVTKLDNRGKSINISIQDDSVQDDCIFASVLHT
PSAVNDILNDFNWDSNSLDETVSPCVLSQKSTCTDRVATTPKENPNSSKT
GRKSTNCIEGQKNFETSTTCRKTIIEETPLKDMVKKSKADISPISPFGDK
KAFNFRKFRRTFRHYSPVSRDSIIICTTP Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001841 | Zinc finger, RING-type | SMART | SM00184 | ring_2 | coord: 36..73
e-value: 0.0023
score: 27.2 |
| IPR001841 | Zinc finger, RING-type | PFAM | PF13639 | zf-RING_2 | coord: 35..74
e-value: 5.9E-8
score: 32.8 |
| IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 36..74
score: 11.752 |
| IPR001841 | Zinc finger, RING-type | CDD | cd00162 | RING | coord: 35..77
e-value: 2.09679E-8
score: 50.9072 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 12..211
e-value: 1.7E-14
score: 52.9 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 153..368 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..31 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 389..448 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 461..550 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 29..80 |
| IPR017907 | Zinc finger, RING-type, conserved site | PROSITE | PS00518 | ZF_RING_1 | coord: 51..60 |
Blast
The following BLAST results are available for this feature:
|
