XLOC_011960 (gene) - C. hemisphaerica

Overview
NameXLOC_011960
Unique NameXLOC_011960
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000385:7150..15831-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011960 ID=XLOC_011960|Name=XLOC_011960|organism=Clytia hemisphaerica|type=gene|length=8682bp|location=Sequence derived from alignment at sc0000385:7150..15831- (Clytia hemisphaerica)
AAACAACCATGTATATTGTTTTTCCAATTTAAAGCGAAGGGACGAAGTCG CGATCCGCCTCGATTCAGCCAATCAAATCACTAGAATTCATCGCATGAGT GAAGAACTTCACATTCGTTTTCGATTTGGTTCGTTGTCCGTGATGGAGTG GGGAATTTTTCAAAATGGCGACGGAATTCAATTCTCCGAGCACCCCAAGC GCAAGCCGTCATGAAAAATCTCTTGGTTTGTTAACAACGAAATTCGTAAC TCTTCTACAGGAAGCTAAGGATGGAGTACTTGATTTAAAAGTGGTAAGAT ATTTTTTTAAGAATATATGATTTGATATTGTTTTAGCAAAAAAAAAAGAT TTCACAGTTTAAAAGTCACCCTTGGCAGCAACCAACCAAGGTGTTCTGGT TTGCTGCCTGGTCTTCCTTAAAGTGATTTACATTCTGAAATCAGAATACC TCTTGCTGGCGCTCAGTTGCTTTGCTAAAACATGGTTTGGGCCATTCCAG AAAATTTTCGTACTGTAGAAGAGGTAGGGTGGTCAGAGGAAATTTCAAAC TTACTTGCAGAATACCAAACCAAGATTAATGGAAAGCCATAACCATCAGA AGAAAAATGAGGGGTCATTTACCTTCCAATTCTTTAAAGTTCCAAAGATA TTACATTTTGAAGTTCAATTTTTCAAGCATTTTCGTGCACGCATCGCCAG CCATTTTGTACCTTCACGGCACCAAAAGCGAAAGTGTTTTATGAAAAATT CCGCGCTGGAGGTTTGGTGCGAGTTTTATTTTCCGTAGATCAGTGAGGCT AGGCTGGAACTTCAATTTTTGAGGATTACGATTTTACCAGTTTTTTAGCG ATTTTTGCCTCGCTAACCCAAATCTCGCAACCTCTTTACCTTAAGCCAGN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNGGATCGATTCTCAACAACAAAAT ACATCTTTTGGTCTTTGGGTTTGTTTCTGACGTTTTTTCTTCAAAGAATA TCGATCACTTTCCTTTTCCCCTTGAGTGTGCGAGAAAAAAATGACAAGCT CGTGTTCGTGCGGGCGAATAAAGATGAGGCGGCAATCTTGCACTGAGGGT GCTACTTAGTTTCCGCCCTATTTTGCGCCCACGATAGAATGGTTCAACGA CTCTCTTTAAAGGCCCAGTACGCTAAAGCTCTGGGCCAAAAATTGGGGAA ATATTTTTTCAGAAATTGGAAAATCAGGGAGACATTTTGCCAAAATTTGG GAAATCGGAGAAAGTTTTTTCAAAAATCAAAAATGCGCGAGATTGCGTGA TTGCTCTGATAATGCAGGCCTCTCCACGAATAAAATCAAACGTGATCGAT GAATTGATCTTGTAAATAAATTGATGCGCGCAAATTTTTTTACCAAATTG CTCGTATCAATCAAATTTTATGCGCGCGATTTCTAAAAAATGCTCCCCAG AAATATTTTTGATTTAATCATATAGATTCTTCCCTTATCTCTATCATAAT GAGCTTCTCATATTACAGGATGCTAAAGTGTTTTATTGGACCTACCTCCG GGTACCCCGGTGGAGGTTCTATAAATTAACCCATGTCCGTTTGTTCGTTC GTCCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTT CTGATTTTTTGCACAATTCAATGATGCAAAATGGCAATGCCCAGAACGTG ACGGAGCCCGATTTTTGAGAAAAAATTTATTTGGGCAAATTTGGGCCAAA AACTACCTAAAAATAGGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NTCGCCTTAAAAAACGGATTTTCGTATTTTGGGGAAATTCCCTTTAACCA AATAAGAAAATATAGCTTTTCTCAAAGTTGACTCATTATTTTTTTCAGAT TTTTGCACAATGATGCAAAATGGCAATGCCTAAAATGTGACGGAGCCCGA TTTTTGAAAAAAAATATATTTGGGTAAATTTGGGCAAATTTGGGCAAAAA ACTGCCTAAAAATAGGGTTTTTTGGACTTTGTGTAAAATCCTGTCATTAC TTTTTTCTGATTTTTTTACAAAGATGGAGGGCAAGATTCTCTAAAGAATG GCTGAAGTGGATTTTCCTGGAAAATTCTTATTCGCCTTAAAAGACGGATT TTCGTATTTTGGGAAATTCACTGCTTTAACCAAATAAGAAAATATAGCTT TTCACAATGTTGACTTATAGTTTTTTTCTGATTTTTTGCACAATGATGCA AAATGGCAATTCCCAAAATGTGACGGAGCCAGACTTTTTAGGAAAATTGT TTTGGGCAAATTTGGGCCAAAAACAGCTTTAAAAGGTTTTTTGGGCCTGA ATGGTTTAAGTGATTTTCGTATTTGGGGAAATTCCTTTTTACCATTTTAC ATTATTCAACACACAAGCTTTATTTTTCCATNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTC CATTCTGAATTTTTGTACAATTATTGTCACTTTTTTCTTATTTTCATCTG ATGTTAATCATTAGGTAGGTCCATTCAGCATGTTGCTTGTTTTTCTATTC AAACTTTTGTTAATTAAATAGTTTTAAAGAAGTCTATAATTCCCATTTTC AATTGAGCTTATAAGCTGCAAGGTCACCCTTAAACAAAGATAACTTTATT ATGATGGAAACCTAAAGTAATTGGCGCGAGCGACTTTTCGCCCTACTGAT TATGTTCAATCGATTCAATTGCATTCGCTCGCATTAATCACTCCTGTCTC CTGTGGTGCTTACGCTCTCACTTTTATCTGATTTTCTAATGGCGTATTGG CGGTTGCCCATTTGCTAAAGCTCTAAAGGAGTGGGCTAATCTACACTCAA TCAATCTTATCAAACATTAACGTAATCGAACTAATCAAACATAATCGAAT CTCAATTGAATGTAATTTTAATACAATCGAATATAACCTAGGAATCGGCT GTTCAATTGAGATTTGATCATTGATTTGTAAAATCTTTGATAGCCAACCT GTCTGGTTGGTATTTTACAGATCAGAATTTAAACTTTATATACTAAAATC TTGTATTGACTGATTCGCTTGTTCAATTTGACTGAAATTTGTTCCTGAAG GTTGATATATATATGTCAAATGAAAGAGACTAGTCACAGAAAAAAGATGA CTTAAAATTTTCACCAGTGATTGCTATTGATCATCTGTGACAGTATGCAA ATTATAATTTAGTTATATAAGTGGTTGGTATTTTACAGAGCGTCAAATGC TCACTTTCAGCATAACCACTGGTCTGTGATGCACAAACGGTTAAGCTCTT TAGGTAATTAAACGGTTGGTAAACCACAACTTTAAAAAGTACAGGTTCAT GAGATTTTAGAACTTACGAGTACATGACCCATGACCCCCTGTAATTAATG TCCTTTACATTCAGATCTTTATTTTTTCAGGCAGCTGATCAATTGGCTGT GCGTCAAAAAAGAAGAATTTATGATATAACAAATGTACTGGAAGGTATTG GTTTGATAGAAAAGAAGTCCAAGAATAGCATACAGTGGAAGTATGATAGT TCTTTTGTCACTTTTTCAGTTTTGACATTTCTGGACCTACCTCCGGGTAC CCCGGTGGAGGTCCTTTAAATTAACGTTCGTTCGTTACCAGCTTTTTTCG GGATTAGCTCATTACTTTGTTCTGTTTTTTGGCACAATGATGCAAAATGA TGATTCCTAAAAAGTGACGGAGCCCGATTTTAGAAAAAAACAATTTTCCG GCCGAAAAAGCTGGAAATATGCTGGGAAAAAACGTTTTTTTGGCATTTTC TCGAGATATTATAATTAGCTTTTTCTTATTCTTTGCTCAAAGGTGCGTAT TAACAATGCCCAAAACATGGCCGAGTCCGATTTTTGAGAAAATTTCTTTT CCAGTTGAAAATGCCGGAAATCGTCGTTTTTGCAGATTTTCATTGGATTT TGTCCTTATATTTCTATGTTCTTCACACAAAAACATTATTGATAACAATG CTCACCATCAAGCATGATTCAATGGTCAATAAAACTGATTTTTGCGACCA GAANATTTTTGCGACCAGAACTTTCTATTTNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNATTTTTTCCCTACAACCCTTCCCTCTCCC CCCATCAACAATCAATGATGAATTTATTGTGTTATGCATTTTCGCTAAAC GCTATATTTTCTGACTGATTTTTTTTCATTTTTCTCCTCGCATTGCTATC TAACTTTCATCATCAGTTAGGTCCATTCAGCATCTAGCTTGTTATAATTA TTATCCTTATAACATTTTTTGAGTCCTTGTAGTTTCACTCAGGCTGACAA TATTGAAAGGCTTGGTGAAACTCATTCGAATGATTTCATCCACACGTCAA ATAATAATCTATGGTTATAAGAGCGAAAGTGAGATAGTGATTGCCATTGT GTTGATGTTGAAATAAGATTTTTGACTAGAAAAACAACTTTTTATAACGT TTTAATGCCAGATTAATTAAATCAAAGAAGTAGAACTTATTAGAAGTGTC TTTTTGCACACAGCTCCACATTTATGTCCATTTGATCTTTTTGATAAGCC CACACAATATTGTATTGATTTTCGCAAAACCAATTCTGTTTCAGGGGTGC AGGACCAGGCTGCAATTCAAGCGAAGTGTCAGCAAAATTAAGAGACTTAA AAACTGAATTAGACAGGCTTGATAGTATTGAACGTATACTTGATGAACAA AAACTATGGGTCCAGCAAAGTTTAAAAAATGTATCTGAAGACCCAGATAA TGAACGACATGCATATGTATCACATGATGATATTTGTAACTGTTACCAAG GTGAAACATTGCTAGCTATCCAAGCACCCTCAGGCACTCAACTTGAAGTA CCACCACCTGAAATTGTAAGTTGATTTTCATTTTCCTTTTCGTTTTATCA TCTTTAAACCAATATAATATTCAAGCATTCTTCACAAACATATTGACCTA GAATCCAAAAAACATCTGTCGACCTTTAAAGTTGGACAGCTTGGAGAGGT TGCTTTAGATAAATGAATTGTGGTTTAAAAAAAAAAAAAATTAAGATTTT GAGGGCCTCTGGACTGCCCCGGACGGTTTTTTCCAAAACGAAGCCATAAC CTTAGGACAGCCTAAACAAAGGCTTCAAGAAAGCTCAATTCCACTAAAAC CCTGGGATCTTGTTCCTTGAGGACTTATAAATATATATAGTCCCAACATG ACTGGGGAAAATTGACGCACAAGTTGGGTTTTGAAGTCATTTCCAGTCAA TTTTCTCGAGTTACATTTGGAAATCAACTATATCCATTCAAAACTTCTCT ATTTTGTTTTTCGAGAGCTATCGATTGGTATAAGTGGTTTTTTGAAATTT GAAATTTTGTCAAATTTTAGGGGTCAAGAGGTTTTGCCTGTGACGTCAGT TTTTGAGTCATAGCAAATTTTCCTAGACCTAAGCAAAAAAAAACCCTCGC ACAAAAGTCTTTAAATACTTCATTCTTTGAATCGGACCAGGTTTGGTTGC GTAGTATAAAAGATGTCACAGGTCCTAAGGGTTTTCTGATTTAGTTGTAT CATATTTCTCTCTTAGCAACAAGGTCAACGTCCCAAGTATCAAATGCACC TGAACAGTTCGAATGGCTCCATATGTGTACTACTTGTAAACCATGATACC AAATCTGATACACCCGTTGTTGTCCCCGTTCCACCCCCGGACCAAGACGA TTCGACTTCAAGAACAACATTACCTAGTTCGTCTTCCACAGCAACGGATA CAAAGAAAAACGTCAAATCAAGTACAGTCATCAAAGAAGAGACGATAGAG GAGCGCCTACAAAGTAAAATTTCTCCAATCATTATTAATTTTCTCGGACT GAAGTTTTGGTTCCCTTTTTGCCGTACTAAGTTTTCGAGAACAGTCCATT TTTAGATCCCTGGAGTAAACATTACTTAGTTTAGGTTGTTTTATTTGCAA TTTTCATTATTGTATTGTTAAATTTTTTAGACCCAATGGCATCAGGTGGT CAAGATCCTTCTCTCGTTGAATCTGAACAAATCACTGGTAAAATTTCCTT TCAATTATGTAAAGCCTGCAATGACACTAAAATTATTTCTATCATGAACT TGAACCTGGCCCTTTTAGCCTGTAAAATCTTCTAAAACTAATTTACTTTC ATACTTNCTGGCCCTTTTATCCTGTAAAATCTTCTAAAACTGATTTACTT TCATACTGCAGAACTTGAAGATATCAATCTGGACAATTTTTGCAAAGATA CCGACGGTAGGAATTGGTTTTATTATTAATTTTATAACACTTTCATTCAT CATACAAAATTTATTCTCTGAAAATGTGAAAGAAATTATTTCCAAGAAGA TAAGGTATCTTTTTCAATAGTCCATGAACTATGACTGAGTTTTGAAGAAT TTTATACAATCCCCTAGGTTTATAAAACTATGAAAATTATATTTTGTATA AAATGAGCGCTTCATTGGAAAAATTAATATCCAGCAAGATGTGTATTTTT TGAAAGTCAGCTCTAATAAAATCTTCTTCTTTTTCTCTAGCTTTTACGCC ACTTTTAAGACTTTCACCACCTCCGGGAGACCAAGACTATTATTTTAATC TGGACGATAGTGAGGGCGTTTGTGACTTATTTGATGTCCCATTGAAAGTA TAATTATTGTTGGCTTTCGCTATGGTGGATTCTGGTTGATCGATGCCGCA GGCCATTCTGTGTGCATTTTTTAAGTGGCAGGGGAGATGTTATTTGTGAA AGATGTAGATTTATACATAATGTGGTTCTTGGATGCTTGGATAAACTGTT CATTGAATAGTTTTATGGTCTTGATTGTTAAATCGATGATTATGTGTCCA TTGAATGTGTAAATTGTACCAAATTTATATATTGGGCGCCTTCTGGTGAC AAAATGAATGTAATCCTTTGGTGAATAACATCGTGATGGTGCTATATTGT TCTTATTTTATCAAGAATGGCCATTCCAAGCCATATTGCTTTATTTCATC AAGAATTGCCGTTTCAAGCCATTTTGCCTTGGTACCTGAATGGATACCTC ACGCCAACGTTTTAAACTAGCATACAGTACGTAATTTGAATGAAAACAAC AATAACAACAACAGCATCTAATCTTGTTTTCATCTCAAGGTAGGGAAAAA TATGTTAACCCTCCTGGTTAAATTGATATCGTTTGAACAATAACTTGCGG AAGGTTTGCAACTTTTGTCCTGTCAGTTTGAAGTTTCAATTTTAGATTTT TATTCGATTTTTGACTTACTTTTGAACAGAGAGATTTGTTACCATTTATT AGAATATTAGCTCAGATTATTTACATTATATAATTGTTTTTTAGAAAATT TTCGAAGCCCTTTTCTTTCGAACATAATAAGTGGTTTTATATTAATTCTT TATTTATTTACATACAGATTTATGATTTGTTTGTTGTTTTTGTGTATATC CTTTGCGTGGTTGTGCTTTTACTGAATCTTTCTCTTTTAAACGCTTTGCG ATGTTATCAATGTTGTGATTTTATTTATGAAGTTTAAAAAAATTTATGCG ACCTCGTACCATTGAGGACTTGATTAATTTTTTTACTTGATGATATTCCA CTCACAAATATCTTTTCAACGAGCAAAAAATCGCAATGTCATTCCAAATT CTATCAAGAGCTACACCCATTTTTGGTCTCAGCTGCAAATTATTTTGAGA TTGGCCATATTCAACACTCGAGCACTTTGATATGATACATATGTTCACAA CAGCATGGTTTAGGGCATAATATGTTAATAGCTCAATTCTTATAACAGAT TATAAATATTATATAGAATATTGTATGCTATATTTTGATTTGATGTTTTG AAAGCATAACCTAGTAGTAGAAAAAACACCTAGATAGAATGATAGAAACA CAGAAAAAACGTTCGACAACGATTCTATGCTTTCCTTCGAAGTAAAGGAA CGTTTTTCAACTGAAATTTCACTAACGTAATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021350TCONS_00021350Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021350-proteinTCONS_00021350-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000385supercontigsc0000385:7150..15831 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
E2F4transcription factor E2F4 Homo Sapiens
E2F5transcription factor E2F5 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.36 23.97 4.33 2.51 142.75 113.54 63.2 63.81 30.15 35.7 32.49 24.24 20.69 21.59 19.73 24.51 37.45 35.15 12.04 14.56 33.66 32.51 57.66 52.47 44.17 40.11 23.87 18.85 39.71 42.64