XLOC_011770 (gene) - C. hemisphaerica

Overview
NameXLOC_011770
Unique NameXLOC_011770
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000376:166839..171290+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011770 ID=XLOC_011770|Name=XLOC_011770|organism=Clytia hemisphaerica|type=gene|length=4452bp|location=Sequence derived from alignment at sc0000376:166839..171290+ (Clytia hemisphaerica)
TCGGTGATCACGACTTTTAGCGACAGATTTAACGAGAACGACAAACCTGG AGACACTTATAAAAGGAAAGGTCCAGCAGAGGATAATCATAAAGAATTTT GGATAGGTGAAAACCAGCTTGTTGTTATATTTTGTTGATGGTAATCGGAG ATTTTGGTTTTAACACAAGATTTCCAATAGAGACGTGTGGTCCGCACTAA AGGAAGCAGCACTTCAGTAAAATAAACGAACAAAAAAGTGGGTTGGCAAA AAAACCAATTTTGGTCGTCAGTAGAAAAAACCTAACTAAGAGAAGAAGGG TTAGGATCGCACGTTAGCCTACCAAGCAGTCAGCAATACGTAGAGATTTC GATGTCAAAACAGACGCGTCctcaatcatcaatcagtgaAGAGAGAAGAG AgggagagaagaaaaaaaacaaaagcatAAATCATTTTGGATTTCAGTTT TGTGGTCGTTCCAACCGTTCACCTGATACCTGTGTTGTGATCGGCAAAAA GATAAATACACACAAACACATCTATAAAAAGGACACTATCACTACCAACA TgctcaaatcacaaaagaaatcaCGCTGCAAAGACAACATGATTCTAACC ATCAAAATTTTCTTAGGACTAGCTGTTCTTGCTGGAATAGGTGCTGTCGT CCTAACATCANAAATTTTCTTAGGACTAGCTGTTCTTGCTGGAATAGGTG CTGTCGTCTTAACATCCAGACGTAACATGCAACAAACTTTATTCAAAGAT GAAAAACAAATCACCACAAACACTTTAAACAATGTTGTCGTGGTACCCCC TCAAGCAAATCGAAACAAAAAATCGTTCACGTACCAAGGCCTCGGAGGAC CCTGGCAAAGCATCAGATTACCTACAGACATTGTGCCGCAACATTACGAC TTAGATTTGAACGTGGACATGGACAAGGAGACGTATATCGGCGTCGTCAA TATCTTGGTTAATGTTACCGGGGACAGCGTAAGGTATATTTTACTTCATA AGGTCAACATCAGCATCACGCAAATGACAATCAACGACATTAACGGTCAC AAATTAAACGTTTTACAGACATTCGAGAACACTTTATATGAATATCTCGT CATTGAGATGAGCTATCCTCTGATAAAAGGAACACAACTGAAGATTGGGC TGAACTTCCAAGCTAGCCTGCGCACTGACTTGACAGGCTTCTTCATTACA CGTAAAGGAAACAGTAAGATGGCGGCCACCTTCTTGTCACCTGTCAGTAC TCGCAAATTCTTCCCATGCTTTGATGAACCTGTCTTCAAGGCTACCTTTT CCATAAAAGTCACGCATAGCAGCCAATACAAAGCTCTCTCAAATATGCCG GTTACCACTCAAACTACAGTGAAGAGCCAAACGAAAACtgaattcaaaaa gtctcttcCGATGTCGACATACAATTTAGGACTTCTTCTCGCTGACGATA CATACCAAGTCAAAGAAAAGCGTATTGTTGGTTCTTTGACCATTCAAATT TGGGACTTCAAAACGAACTCTGGTTGGAAAAGCGAGACTGATGATATAGT AAAACTTTTGGATTATTATGAGCGACATTTCTTTCAAGTACCATTCCCTC TTGAGAAATTAGACGTTGCCGTGATACCTGATTACATCCCAGGAGCAATG GAGACCTGGGGCCTAATGATGTTTCGTGTGGGGTTAGATAAATATCATTT GGTGGCTCATGAGATTGCCCATCAATGGTTTGGTAATCTGGTCACTATGG AGTTTTGGGATGTTGCTTGGATCAAAGAAGGTGAGTGTATTtcttcatct tgattttttcttcattttcctaaTTTCATATTAAAAAAAGCTTGGAGCTA AACCCATAGGGAAGCTTTTAGCGACTACTGAAGCCTAAAAACAACACTTC CCATACAAAAGGTTGAAATCAATCTTCTCAAATTGTTTTAGGGTTTGCAC AATATCTTGCGACGGTCGTTGGCGACACCGTCAGACAAACGCAACGCTAT AAAAACCAATTCTTCTCAGGAATGTCAAGAGCTTTACCGATGGATTCCTA CGCTACTTCTCATCCAATTGTTCCCGAGATTAACACGCCGACAGACATAC GAAACGTCTATGATAATATCGTGTACTATAAAGGTGAACCGGTCGTTCAT ATTTTGGCCACGCTTGTTGGGATGACGAACTTTCGCAAAGGCATGAAACG CTTtttacaacaatacaaatacaaaaatgcaaaacaagacgacttattCA NACGAAAACtgaattcaaaaagtctcttcCGATGTCGACATACAATTTAG GACTTCTTCTCGCTGACGATACATACCAAGTCAAAGAAAAGCGTATTGTT GGTTCTTTGACCATTCAAATTTGGGACTTCAAAACGAACTCTGGTTGGAA AAGCGAGACTGATGATATAGTAAAACTTTTGGATTATTATGAGCGACATT TCTTTCAAGTACCATTCCCTCTTGAGAAATTAGACGTTGCCGTGATACCT GATTACATCCCAGGAGCAATGGAGACCTGGGGCCTAATGATGTTTCGTGT GGGGTTAGATAAATATCATTTGGTGGCTCATGAGATTGCCCATCAATGGT TTGGTAATCTGGTCACTATGGAGTTTTGGGATGTTGCTTGGATCAAAGAA GGTGAGTGTATTtcttcatcttgattttttcttcattttcctaaTTTCAT ATTAAAAAAAGCTTAGAGCTAAACCCATAGGGAAGCTTTTAGCGACTACT GAAGCCTAAAAACAACACTTCTCATACAAAAGGTTGAAATCAATCTTCTC AAATTGTTTTCAGGGTTCGCACAATATCTTGCGACGGTCGTTGGCGACAC CGTCAGACAAACGCAACGCTACAAAAACCAATTCTTCTCAGGAATGTCAA GAGCTTTACCGATGGATTCCTACGCTACTTCTCATCCAATTGTTCCCGAG ATTAACACGCCGACAGACATACGAAACGTCTATGATAATATCGTGTACTA TAAAGGTGAACCGGTCGTTCATATTTTGGCCACACTTGTTGGGATGACGA ACTTTCGCAAAGGCATGAAACGCTTtttacaacaatacaaatacaaaaat GCAGAACAAGACGACTTATTCAGAGTTTTTGGGTAAGGATATATCTCGAT TCCCTAAATTAAATGTCAGACATTTAGTCACACTTTTATTCTCTCGTTAT ATGTTTTTTAACTGTAAGTATGTGAGAGAAAAATACCCCATGTAATTCGA TATTATCAAGAGAACGAAAAAAGAGGGCTCTTTAGCTCTCACATGTCAAA AAAGACTGCTTGAATTTAATACCATTTTTTAAGAGGCTGTCAAAATAATC GgtgtttatttttcaataattttgtattctttcaatttattcagcGATAT TAGTGGCATCGATGTCAAATCTTTCATGGATCCATGGCTCTTACAAATGG GCTACCCACTTTTGAGCGTCAACCGATTGAATAACACCCACATTGAAGTT GAACAAGAGAGATTTTCAATGGATGCACCCAATACTGGTacgtaaacaaa aaaaaattaaaaagatagttTCACGTACGAAGAACTCTTAGATTTTCCct tcaaaatgttgaaatacaAGAGAAGTGCCACTTCAAATGAGACGCAGGCA AAATTCCAAAATAATTTCACAATAATCAGTCAATTTTCCATTCTATCATT TGTAGCACTTAAAGCCTCGCCCTTCAACTATCAGTGGCCTATCATCGTTA CCTATCGAGACCTAAATGACGTCAAATCAAAACAAGTCATCATGACAGGC AAAAAAGCCATCCTGCCAATCCCCGATGGTTCCGTATTAAATCCGGACCA TATGCAATATTACCGGATACGATTTTCAAAGAACAGCACAGCTCAGTTGA AAAAGCAACTCATCCACAACCAAAGTAGATTCACTGTCAACGATCGAATT GGAATCATCTCTGACATGTTTTTCAATTTGCAAGCAAGGAAAATGAAACT AGAACAAGTTATTGACTTCCTGGAATATTTCAAggtatgaatattttttt aaattcaaaagtttCCACTTTTTCGGCCCCTTTTACGCTAGCCTTGTGAC AGAATTAGGGTCAACGTAAACAAATGACCACCGTCCTTTATAGGGCGTAA GAGGGCTGATATATGCtgattttcaaacaatttcaacaaaaaataaacag taaaaataatggaaagaTTTTCACAATTAATTTTTTAGCATGAAAGAGAG CACTCTACATGGACAGAGGGAATTAAAATCTTGACCAAAGTACACGACTT GATAAAACACGATGATAGCTTACGTAACTTATGGGATAAGAAAATCATCC AACCTTACGTCGAAAGAGCTTACTCGCTTTTCCAAAGCAAAGGTGCAGTC ATACGCGATGCTTGTTATTTGAATCATACACAAGCCATCCAGGATGCCGA GC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020985TCONS_00020985Clytia hemisphaericatranscript
TCONS_00020986TCONS_00020986Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020985-proteinTCONS_00020985-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000376supercontigsc0000376:166839..171290 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.24 0.29 1.05 0.75 0 0 1.06 0.88 0.99 2.49 0.78 0.83 36.69 20.74 4.7 5.82 13.62 26.03 4.18 12.83 6.54 6.83 2.01 3.09 21.71 19.99 5.06 3.6 8.47 8.48