XLOC_011739 (gene) - C. hemisphaerica

Overview
NameXLOC_011739
Unique NameXLOC_011739
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000374:4958..8233+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011739 ID=XLOC_011739|Name=XLOC_011739|organism=Clytia hemisphaerica|type=gene|length=3276bp|location=Sequence derived from alignment at sc0000374:4958..8233+ (Clytia hemisphaerica)
cctcaccaaaaaccggggtttttcatcccgtttcttagtaaccactttga cgattttcgaaaaatagaagcctttcaagtgttttgacgcaaattcgatt ttttttaaaatactgcaggagcttcaaacgtttaaagtgacgtcaaaaaa tcgaatgtttagagcccgaaaagcccggttttcgggctcaaaacattcga aaaagtcgcaaagtggaatagacgttacagCGTAGAAAAAagccgtgacg tctagtatCGGCTACGTTATTGTCAGATGTTAGAAAAACGCCACTAAATC AAGAGGCACCCCTCAGTAAGAGAATAATTTTTGCTGCTTTTGCTGTGATA GACCTTTTCCTATTATataatgttgaataattaaaacaatttttaccTAA TCGTTACGCATAAACAATATCACATTAAAACTTGGCGGCCATTTGATGGC AGAAGTTTAAACCCGCTTGTATTGAAACTTGTTGAATTACAGTATACCTA CTTTCAGAAATGGAAAAGACGGGCTCTATCAGTGTGTATAGAATTATAAG GGATGTCAAAGAACacaaattgttttcattttatcttcTTCTTTCAGCTA CTCTTCCAACTTCTGTATCATGTGTTGTATCAAGTTTTCTGTGCTTGATC ACTTTTGCTGGtatgcaactcttcaaaacaccATTAGGATCTGGTAAAAT GATGACCATCCTTGGTGGTTTTTTGGGATCACAATTATTTGTATTTGCAC TGACtgtatcttttcaaaaaaatatcttaaatttGAGCTCAAATGTATAG TTTGACCTACAGTAAGACCTTAAGTTATGTATCTTTAATGAGAGAAaact atttttagattttagttcGACCTACATTTAACTAAAGAGCTCTGTtgttt gaaaatcataaaacaAAATGTTTCACTAGGATAGAGTTCAGTAGAATCAA AGGGAAATACTTCTACTTGACTctgagaccatgttcacacgttactggtT CGTTTCGCTCCGCtgtgattttcgttacggatcgagattGTTCATATTAG TTTCGAAACGTTTCGGAGCAACAAAACGGAGCAGTTCTGTTCCAATAAAA AAGTGGAgtgaaaccgtttcgatctgttttgctgtgtaacgtcttctttt ttgacgtttcgaattttgacgttcacacttgttttcggaaccgtttcgtt tcggagcgaaacggaaccgtaaacgtctgaacatggtctgagATTTTCCG AATAcacaataattatttttttgtaagtAATTAGATTATCGCTAGAGCTG AGCCTCAGATTGTTCTtgaatttgttcttaggtttcgGCCAATCTCCaat aaaagcgtgtattttgTGATTTAGATATTCTTTGAAGTTATTTATTTCTT GTTATTACTACTCTAAATATTAAGATAACTTTTTCTTAACGAAATTACAA TGATAATTAACAACAGGCTATCAATAATTTCGAAGTGATGAATATGGGAC GAAATTTCCAAGCTAAACTTTTCCCTGAAggtaagataattttttttatt caagctATAATAGCCCTGAAAGTCTGCAGGGTCGGCACCAGTGAAACTGC ATGTCTACTACACCTTTAAGAGCTTGTAACAGGATTTcataatcaaaatt taaaaagtccgAGTGGGAGTGTAATACTCGATATaaacaaaatgacgtca tatgtTTTGTACAAAACATGTAGATCAAAGTGACGTCAGAAGAATTCGGA TTCAACGGTATAGaccaatattttatttatttatcaaacCAAATTTACTC TAATTTATTGCCCCTATTGTAAGTATATCTGAAATATAATATTcacggaa aaaaaaaaaatagaccaatgaagtataagcttgaagggctagaatcgaat ctgcATGGTAGAATTAGAAGCCAACAAgtcctaccaaagttgcacgGCCT AGCGTGGCCCGCCTGCATTTTACACAAATGGCAGATTGAAACTTAAGACT TACTGttaaatttcgaaaataatATCACTCGAAAAGAAAAGAATTGCTAG ATTGAAttcgtcgtcaaaaatacggcacatattttaaggcttcatttttt cttgcctgagaaaggttagagattcgatCCTAGCCCTTTGGGCTCATACT TCATTGGTAATAGACCGGGTATAGCGTCAAACTTTCTGCAATGCAATAAG ATTAGTATTAATTTTTGTCTTTGATTCTCTCTTTAGTCATTCTAGCTATG TTCATTGCTTTAATTGCATCTGGTATGGTTCACCGCGTCTGTGTCACTGT TTGGTGGgtttcaacttttttctttcatttttggaatttgccAAAGCATA TCTTGGGGTAGCTTTCTAAACGTTTAAAAACCATACTTTGATATTATGAC ATCTTGTTGTCATTATAAACCGTCCCTGGAGGTTTAAACCCAGCGAATTT TCCTCCGTTGTCGGGCTACGAAGAACAAAATAATCAAACCAGGATCTGtt taataattaattaattaataataAGTTGCGAACTgttaaaacacaaagaa ttaaccTCGGAATGGGCTTTTTCTGTTAACAAGGAACTagaatatcaaat ttttgtcaTGATTCTCATGGCTCATTTACAAAAATTAGGattaagtttca aaattcaagcaaAGATTGAGTTTCTGCCACTGTTATCCGATTGCAGAAAA GGCCTGGAAATTTCTCTGGACCCAAGCTTTACTAGTTATATTTTTCGAGT AAATTtcctttaaatcaagttattaaAGTCTGAAAATAAGCTAAGGTGTT AAAATTTCACGtcctaaaattagaaaaaaatctctaaaaggTTGACACTC AATCAacggaaaaaaaaactttttgcacgGAATAGCGAAAAACCTTTTCG CCTCCAATTAGGGGATAACCCTGATGGTTTCCGCCAATTAAAGATTCCAC TATATTCTGTTTTAGTTTACGtctttttcaaatattctttCTTCTATTTT CAGTTTCATCTTCTCATGTATCGCCCTTTACTACTTAAACAATATGTCCA CCTCAAGCCAACCCGCCCCTGTTGCCCCCACCACAAAGAAAGGAAAGAAA CATAATTAATTACCAGTGTCCGTTTGATGGATTGTAATTAGTTATTTTGT CATTTATTTTGTAATAGCTTTCTATTTCACTTAGTTGTTTTCTTTTGGTA ATAAATGGGACATTTTcataaacaaaaagttttagaTTGTACGACTGTTT TCCATGAAATAACTTTAGATAAGAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020925TCONS_00020925Clytia hemisphaericatranscript
TCONS_00020926TCONS_00020926Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020926-proteinTCONS_00020926-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000374supercontigsc0000374:4958..8233 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
KRTCAP2keratinocyte-associated protein 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
317.99 327.51 333.26 311.58 113.88 94.1 253.29 260.22 159.52 175.83 158.6 171.81 147.58 143.94 189.27 210.53 177.03 188.25 112.95 132.43 131.36 126.29 191.34 193.59 127.72 147.65 150.15 154.6 265.53 220.51