XLOC_011713 (gene) - C. hemisphaerica

Overview
NameXLOC_011713
Unique NameXLOC_011713
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000373:134195..140929+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011713 ID=XLOC_011713|Name=XLOC_011713|organism=Clytia hemisphaerica|type=gene|length=6735bp|location=Sequence derived from alignment at sc0000373:134195..140929+ (Clytia hemisphaerica)
TTTAAACTTCTTAAATTCCTGATAGCATCCCACCCGCTGTGGTAAGGAAA TTATTAAGTCGCAATTATGTATCCTCTAACGAACTAAAGTAAGACCTAGT TAtctgatgcttgacatattggaaaatcagtataaataaagctgaaaaat gtttgaaaaaccaTTCAGCTTTCTCACCaagcaagcaaacaaacaaaaag tttcttgaagaATCTACAAAGTTTTCAATCATGAAGATCATCATTCTCGC CGTTCTTGTTGCaggtaaattttaattttatttttgaaaatttatctaTT TCTATTGtcaattatttattttcaataaaaacgtaaaaattaGCAAAGGC AAACATAATGGTGATATAGGTATGAAGTCATTTCACCTCCATCAAATCCA TCTGAATGCTGACATCGATACTTAAAAAGTTTGAAGCTAAAAGTTAAATT ACTTTTTACGCTCTTTCTTTCAGTTTGCAGCGCAGCAAAACCTCACCCCC ATCAACCCTGCCCAGACACCTTATGTGTATGGAGATCAGTTGGAGACATC TTCGCATATAACGAGCACAAACCATATTATTTTGTGACTTGCACAAACAG TGGTCCAGTATGCAGAAGATGTGCTGATGGTTTGGAATTCAACGAGAAAA ACAAAGCTTGTGTTCGTTCATTCAagaaatcaacaacaacaacaacaact accACAACAACTACGACCACTACCCCAACTACAACGACCACCCGAGCCGT CGATGTACCAGAATGTAAGTATTTATCCagttgaaaaaaatcttttcctt cCTAATCAGGAAATCTTTTTCTGATGTAAACTGTCATTGCTAGTTTTTTG TCACTGctgaaattctgaaattgaattATTGTACGTACCAATACACGTGA CAATCTATACGTCTGTCGGTATTAAAGTTAGTTAAATTCCGGACATTTTA AGAAGGGAAAAATCTACAGTACCAACCTCCAAAAAAGCGGTAACATTTAC CATGATTCCTTTTATTTGTTTAGGTAATGACTCTTTGTGCAAATGGGTTC CAAATGGTTCTTTATTCCGATTGGACAACAACAAACCACAATACTATGTT CAATGCAGCAATGGAATCGCTTCTTGTCGTCAATGTCCACCTCAcatgta tttcaacaacaaatttGATGTCTGTGTTCGACGCACTGTACCAAAAGACT GGTAATATATCACCCCAACAAGATGTAGACTGACCTGACCTGATTGAATA ACAATCGAAAGAGTTATTCATTAACccttattaatttcgcatagcgaaag tattacgatagtctttctgtgtggcgagaaaattttttgggcgcaaatta tggcgtgagtgtttggctgcgggcgtactacggccaatattataaaggtg gactcactcacaaagataaaaaaagcgCTTTTCTTGATAGTTAAAATACT CTAGTGCAAGACGTGTAACCAAGCCTTAGTAAACATTCATCTTCAtcatg agaactttttaatggctgcttggctgctgctgtataactttttatcatgt tttctggtcttttgtagagtatttaaagaggtttattattcgtttactac taagtattttatgtttgtgtagttagtgaatgcaccaatagttgataatg ctcagtaagtacaaaaagagttaattttacaTAACAACACATAACCCTCT TCTTcaaaaaactacaaacagcacaggtatgatatttttttccttttttc accatgtGTTTAATGTTAACCAATTGTGATGtaagtttgatgacagtttt ttatctgatgaagtttgattgttgttcgatgagtttggattaagaaaaag ttccagcttttcctccccgatgccaGCGCCAGGCGATGATGTCAACCTAA CTCTATCAAACCAATTTTGGTaatcgaaccatcaaatttcatcaaacgAA ATCCAACAATAGGTGTTAGATTATGGAACCTGATCGAACAGTAATTGAAC TTTAccagaaaatcttcagtttgatgtttgattatatcgcagttcgatta agttcgatcagtgtttttggttgtttttgtagctcaaatggttccagTTA TTGCTAGCGGAACAGCTCAATCGAACACatggttcggtaatcgaacagtt cgattgacatcgcctggCCGATGGGGTGATAGATATTGGCCTGCTCTTTA AGGTTTCAGCGTGggtgtctgctaataagccgtcaaagtgtaaaaagaat gggcaacaaggtaccgtcaactgctctaacttgtgacgattggtcgaaac atgggactgttgcatatctggtctgtattttcacttgctgtaaaatcgaa agagaaatcgtgtatttttaaatacgccgttccttaactcaaatcaaatg actttggaggttcggtgaaatggtggctgtaTTGCCgttccatgttttgt cagatagtcccaagttagagcagttgacggtaataaatcaaactaattga gcttcaatcaaacttcgcCGATCTTGATAcccttttgctaatcaggattt tcattttgaatcattaaaaactctagtggtaccgttgttttgtatgagat tcccatttccgcactctggaatctttcccctatatcTATTTTAAGGGATA ACTGGCAAGAGATTGGGGTGGGTTTgttttaatgggatgcagttagAGCA GTAaaaggagtcattgttgtgatttgcTAGAAGGGCCATTAATCGATTAC GTATAATATTGATTCTTTTACTGTTTTTAGCATTTACTACTTTCACTGGT GTGTAAATattcattttatgattttatgaaatatttactGTCAACCTAGA AATAATTAATATTAAAGGTCTCTATTATAGCATCGGAAAATAattgaaga ttgaaaataattGCATCACTTTCAGTGAGGTTTAGTCAATTTTTATCTGG TGGGAAAATTTGAGTGACAGGGGGTGGTAAATAAATCCCCATATTCTATC TTGATCGAAGTCTGTATCCTTAAGTTACGAGCTtttcttaatatattttt atatggatTATTGCATTGAGATTTTGGAAAATCTCaaagagtattatttc tttaaagttggctagtttttaccctgccatTTTCTAGTTCAGAAGCTAGA GCTCAACTACACAACTGCTTTTTGCCTTTAGTGGCCTCTTGATTGTCCAT Ggagtcaactgatgcttgtctgaaggttagacctgctgtccggggggtta gacctgctgtctaTGGGTCCAAAGTCacagggtaaatttccaaaaaatgt taaaaaaaatgaaaaattttggttttttgaaaaaagaccctccagtgaac ataaaatattattacgaaaacgtttgaaaatttgttaaaaaaagtctatt ggtcaaaattgacaatttcattttttgcctgtcgaaggttggagcttgca agcacattacaggcaaaatttaaaaatatcaatttttgctcatagacttc ttaaaaaggattttcagactttttcgtaataatattttttgttcactgGA AGGTATTCTTTCCAAAAAACCAAAAATTTTtgaattttggcaaattctta tttttcgatgacgtcatcgttttatgacgtcattttgccttatttccttt atatctcctgatatattcattttcagatataggttcagacctttttcttt atcagtatttcatgctctttcgaatgaaacaaaaatttttcaattttgac gatcttttattttggttgccatagtaaccaatgacgtcagtttccatggc aaccggtggtcacacccggccccacctctcaaattttgatcttctacatt caaggaacaatattcaatcataaaatccctttgcacaagctgctgcacac gggaagctttttcgcgacatagtggcccctactaaatgaaaagttcattt tttcttctttattttcaaaaaatttggaaatttttttctcaagtactatt gcagttctctgattTATTCTGAATATAAAGATCTTTTTTAcgcttataaa aaggaattttttagtcgcattttttaaagaacctttttgtttttaatgga ttaagatttttcataagaaaacagggtatctacgacctgtgtgtacaata caatgtgtatattttgtgtaacgcttcattcaaaatccataatgctgccg gagtcacgtttcacgcgtcttcgtcgttgatgttctaatattatgcgaaa ttttcgactttaagtcgtcttgttgtaaatttttaataatcttTTAGAAT AAATATCTAGCATCAGAAAATCATAATAATTGTCTGCTACTAACTCAAAT TaattatttcttcaaaaaaaagaaagattttagaCAAAGTACAATGTTTT CGAACCATGCAGGTTTAACTATAGCTTTAAGACTGAAAAGATCAGGTCTG CTtttctttgaacttgaaaatgattttgcataattttgcaagattctagt tgtttttggaaggtataAAATGGATGTTCTTAAATATAATTGGGCATTCC ACATCATTAATGCTTCTATCCTATCCTCCATCTTGTTAGTGCCTCTAGTC TAATNAAAaatggatgttcttatatataattGGGTATTCCACATCATTAA TGTTTCTCTCCTATCCTCCAACTTGTTAGTGCCTCTAGTCTAATTCACTG AACTCGGCATAATAAAAAGTTACCAAAAAAGCAAAGTCCCAGcaagaagt agactctagtctatgtCTAGGTTATAAATTAAATATGGCCTAAATACTAC CCCGACCCTAGAAGAGGAAGAAAAATGCCTATTTCTGAAAGCGGTTCTGA TTACTTTGATACCCCTCGCCTATCCATCTCTTGTCAGTTCCTTCTTGAAA GAATGACCTTGAAACATCCAAAAGAAAGGAGACCCTGAATCTATCCGAGG AGCTATCTATGATCGAATTTTAGATTATCTTCAGAGTCTGTCGTAAAAGT GTGTAAACATTTTCTTAGCCCCCGCTTATGATGCGCCACacacccactgg gaccccagcccaatgaagtataacccgaagggctagaagcgaatctcctt ggtaggatttgaagccaacaaatcctaccaaagttgcgcagcCAAGCGCG gccgcgtggtttttacacaaatttcGGATTGAAACTAAAGTTTACCtctg aatttcgaaaaacatATCACTCAAAATAAAGGagtcgctagattcaatct gtcgttaCTTTTTCTTACCTGAGAAAGGTTATAGAttcacttctagccct tcgggcttatacttcattgcatcagccccactggaaaatttgttcaaaat tattttgttcccggtgggaaaactaccctacaatttcagccccagtgaga aatcgactttgattttatccccattcgaaattcaaagtATAAGatttgta ctccaaaaccactggattttttaagcttggaacaatagaatttctatcac CTTGGGATTTCGAAAGAACattttatccccgctgtgggGAGaattttcac cggggctgtgagacaggcttgtttaaaaagttattcaCATAAAAAAGAAA CAACTTCTTTTGAAACAAAGTCGGCTGAAATTTGATAggatataagaaat attttNATAAAAAAGACAACTTCTTTTGAAACAAAGTCGGCTGAAATTTG ATAggatataagaaatattttgtccaAAAAGAATTTAGCACTTTTCAAac tggtctttaaaatacacGTGAACGTAAGAGCACTTGTCCAATCTCGCTGA ACTTTTGGTTACAAAGTTTTGTGGTCGATAACTTGTATTGACAATTAACA CAGGTAAAAAGTCTATGACGAATTTAAATTCCCAGATATAAAATTTATGG CTATAGGGATTAAGAACATATTTAGCTCAGTCTGTAAATCCACATTACCA CAATCCTCGAGTAAGCTACATTTTGATACTTTTCTTTGTTAAAATACTGG CTTATACGATCAGCATGCATGCTAATGAAACTAAATTGTTTCTATCCTAC CATTTCGTTCGAACTGTTCGATAGTTTGATCCTTTCTTCTAAAATATGTA CTTCTTACAGAAATTTTCAAAGCAAGCTAAAAACATGAAACTCAGGTTTA AGAGCCACTATATTTCTCacttaaattttttaatcaagtaCTGAGAGAAA GTTACAGAGGGAAGTTATACCTTACGTTTCTTAACTTAAGTAATAACCCT GGTGTTGACCAATCTAAATCGTGGTTTTCAATCAAACAGTCTGATTATCT AATTACTTAACTACGACCCCTACCCCAACTACAACGACCACCCGAGCCAT CCATGCACCAGAATGTAAGTATTGTTTCAAGTTgaacaaaaatcattttc ttcttcagcaTAATTATCTTTAATAAAGGCTGTCATTGCTAGTTTCTGGC TGTTGTTAAAGTTTTAAGAATACTTAAAATACTAAAGGAGCAGCCGTTAA CTTAATCGTGAAAATGTCTTTTGAAAGCTCTAATCTTTATTTTTCTCACT TTAGGCAACGACTCTTTGTGCAAATGGGTTCCAAATGGTTCTTTATTCCG ATTGGACAACAACAAACCACAATACTATGTTCAATGCAGCAATGGAATCG CTTCTTGCCGTCAATGTCCACCTCAcatgtatttcaacaacaaatttGAT GTCTGTGTTCGACGCACTGTACCAAAAGACTGGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020886TCONS_00020886Clytia hemisphaericatranscript
TCONS_00020887TCONS_00020887Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020886-proteinTCONS_00020886-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000373supercontigsc0000373:134195..140929 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.77 2.19 1.54 0.86 1.28 0.83 0.38 0.64 0.42 0.87 0.6 0.9 14.07 10.7 10.45 3.89 1.34 0.31 0.26 0.66 0.22 0.65 0.39 0.27 1.72 0.59 0.31 0.2 0.24 0.21