XLOC_011601 (gene) - C. hemisphaerica

Overview
NameXLOC_011601
Unique NameXLOC_011601
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000363:300773..304099+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011601 ID=XLOC_011601|Name=XLOC_011601|organism=Clytia hemisphaerica|type=gene|length=3327bp|location=Sequence derived from alignment at sc0000363:300773..304099+ (Clytia hemisphaerica)
GTCAAGTCAAATCGAAAGGAAGCGAAAAGTGATCGAAGATAGAAAATACT
AATTTTATGTGATATTGtgttaatttttttgctgtaaatggaaaaattga
aaattgaaactgtTTGTTTATGATGGATCAACACCTAAAGGAGCTTTCGA
AGCTTTGTCGACTGTGCAGAAAGAAAGTCAATACAAATGTTTCGTATACA
GATTCCAAGACTTGTGACAAatataaaaacaagattttcatgcttttttc
ctATGATATCTCGAAGGACAGTTCACTTCAACATCCGACAAAACTATGCC
ACAATTGTACAGTAAAGCTTGGTAAAGTCAAGAGTGAACACCAATATTTG
GATACAGCGATCGCAGAGTTTCAGGAGCACGATGATAACTGCACATTATG
TCGGTTGCACAGGCTGCCAGAACACAAGTTTCCAATGAGGCAAGCAAATA
TATTTGATCTTGATACGTTGGTCAGCCAAGCTAAAGAACGTGGTTTTGTT
GTTCTGGATTTTTCATCGCAAAAATTTGCTAAAATTGGCCTTCTGAATGA
AAGAAATATTGTTACGCTTTGGCTTACAGTTAAGCAAGACTTAACGTGGG
AATTGAGGGCATTTCAAAGGGATATTTTGGATGGGCCATTTTTCGAAATG
CTCCCCTCAGTTCTAACTGTCGATAATTTTGACAATGTGCTTGGAGAgct
gaaaaatgcaaaaatatgcATTGGAAATAATGACTTTAAAGATTTGATTG
AGCACAAAGTTGAGGGTTTGGGTAGCTTTTTACCAAAAGGTCATTTGGAA
GATGAGCAACTCAATGTTTTGACGACAACTGCATTCATTATCCGCTCAGC
TGAGTGTTCTGTAGTTCTTGCCAGCAACCATGGCCCTGACCGTTGTAAAT
TTTGCTCGAAACACAGAAAAACACTTCTCAATGTCAATCGAAAGCTGCCT
AGTATTGTATCAAGTGCTGTTAAGAAGAAACGCCCTTACAGCAGCATGAG
CAAAAAGCAATTAAAACGTAAACTTTTTGACTCAAGTGTCGAAATAAAGG
AACTTCAACGACAAAAAAGAGTTTTGGAGAAGAAGCTAANAGTGCTGTTA
AGAAGAAACGCCCTCACAGCAGCATGAGCAAAAAGCAATTAAAACGTAAA
CTTTTTGACTCAAGTGTCGAAATAAAGGAACTTCAACGACAAAAAAGAGT
TTTGGAGAAGAAGCTAACtcaatcaacaaaagaaaaaggcaTATATTATT
TCAGAAAACTCAGATACTAGTTACGCCTCAGGAAATTAatcaaacttgtg
aaaaatacacattcttcatttatttttaaacatACCACCGTCAACTGGGG
TAACTTTCACATGTTTGGGGTAACTTTCATTAACTCCAAACAGCAGATTT
TTCTGGTCTGCCATTTTCcaaagtaaagaaaaacaacacatGACTTACTA
AGAACTGTTTACATTCTATCTACATTCAAttgaaaattacagaccagaaa
aatcTGCTGTTTGGAGTTGATGAAAGTAACCCTGGTTGACGGTAATGCCT
ACATGCATATAGATCATCATATCAATTGTAAGCTCCATTTTCATACATGT
TACAGTTTATCTGCTTTGTATTGATAGACAATAAAATGTACGTACTTTAC
CAGTAAATTTNTCTACGCATATAGATCATCATATCAATTGTAAGCTCCAT
TTTTATACATGTTACAGTTTATCTGCTTTGTATTGATAGACAATAAAATG
TACGTACTTTACCAGTAAATTTTCCAATTCCTAAAATAAAAGAGTTGCAA
TTAAATCGTTAATTGTGCATTCAGATATAAGTCTTTAggtacattttttc
ttttggaaagttAATATAAAAGGACCACCCTGAAGTCCATCCTCAGACTC
AATTTTTGTCCACCTTTTAGGGATGAAGCTTAAACGTAAGGATGGTAATC
TGATATCAGCCATAATGAAGAAAGAAACAAACATGTTCGGAGAAAATACA
GCAATGGCACTGTTATGGGAGCAGCAAAGGAAAGCCAGTGGTTACAAAAA
ACCATCATCGATGAAATGGCATCCTGTTATTATTAGATGGTGTCTCAGCA
TTTACTTAAAGTCTCCAGGTAAATATATATTTTAGGCTCAAAAGTTATTa
ctaaaaaaagtttcaaattatAATTTACAATTCTCAGATTTATCAGCATA
CCTTTTTCCAAGGATACTTCAAAAGCTAAAACTTTAGCTCTTATCCTTGT
TTTTTGTAAGCATATTATTtaacaaaattttcgaaatccttatgaaaatt
tttaataataaGGGAATTATTTTCTGCCCAGGGGACACAAGTTGCATTCT
TTCATTTGGTTAACTAAATGCTTAGGCCTCTGATCTATTACAAACTATGC
AAAAGATTATCACgaatgttttttaaaatatttttaggggcTTATGACCA
TATTAGAGACACTGGATTTCTTCAGCTTCCCCATCAAACTACATTAAATC
AGTATACTAACTTCACTGACATCGGCTGTGGATACAACCCAGATGTAATC
AAGCGCCTTTTGGACGATCATTTAGCCAACGTAccagaagaaaaaagaat
ttgtaGTCTCCTCTTCGATGAAATGAAGATTAAATCAGGCCTGGTGTTCA
GCCGAAAAACAggtgatttttaaaaaagggCTTCAAAGCtatctttaaaa
atttataaaccTTTAAACATTTCTCTCTATTACTCAATCTCTCAGTCAGA
GTCACCCCTAGGAAACAAGCCCCAGTATTGTTTAAATtacagcccccaat
caagcaaaaatggtttaccACCTAATCTCAAGGGGCTGCATTCTATGTAA
GCTTCTAACTTTCTACGAATTAAAaggcatcagattgttttttatggAGA
AGTATTCATGGAGAGTGTCATACACTACTAACTGTGGAAGGTTAATATTG
ATTTTAAAACCTTCTTTATTACAGGTAAAATGATTCGCTTCACTTCTTTG
GGAGAcatcaatgatgaaattaatCTTCTGGAGAAacagatgaaaaatga
aagcatCACTGAGCCTCCTGAAATTGCAACCCATGTTTTAGCTGTTATGG
CCAGAGGTATTGTTAAATACTTTAGCTATCCTATCGGATACTTTGCTACC
ACTTCAGCAGATTCAGGTCAACTCTACAACATAATTTGGGATGGAGTTGC
AGCCCTTGAAATGAGTGGTGTAAAGGTTCTCGCCTTTATCTGTGATGGTG
CATCAGCAAATAGAGCGTTTTTTGCTCTGCATAAACTGCAAGATGGATCA
AACGTTTCTGATGATGGTGTGGTTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020684TCONS_00020684Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020684-proteinTCONS_00020684-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000363supercontigsc0000363:300773..304099 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.03	0.02	0.02	0.04	0	0.03	0.07	0.03	0.57	0.07	0.34	0.12	0.08	0.11	0.38	0.22	0.2	0.02	0	0.02	0	0	0	0