XLOC_011599 (gene) - C. hemisphaerica

Overview
NameXLOC_011599
Unique NameXLOC_011599
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000363:194046..203199+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011599 ID=XLOC_011599|Name=XLOC_011599|organism=Clytia hemisphaerica|type=gene|length=9154bp|location=Sequence derived from alignment at sc0000363:194046..203199+ (Clytia hemisphaerica)
CCTCTTTACTTGATAGAAACTCTAGAAGTGGAAAGACAAGATGCCTGTCA AGATAGGTTCCAACTTTGGATGTCAAGTCGTATTGCTCCGCCATTTTGTG TGATCCGTGTTGATCGAACATGTGAAAATTCCTGAATAATGATCTTATAG ATTTAGTAGTACCACGCGTTAAAAATGAAAAGGgaacttttcgatttttt ttggctGCGCTGGGGATCGTTCGAAAAGTAGATTCTTTTGTAGGTAAAAA ATCCtcctttttcccttttttccgtGGACAGTCTTGCTTAAAACTACTTC AAGCTTAAAATTCTCTTTCCATTGCTTCCATGTGAATCCaatgaataaca aaaaaaattgcagCCACGACCTgacattttcttgacaaaaacCAATGTAA ATCAACTCCACTAATTTTTTCGTGAGATGTCTTTGTAAATAATCTATAAT AAAGGGTTTATGTAGTGCTTCAAGATGGAAGAAGAGGATAAGTCTTCCTC CAAAAAGAAGAATGAAGCTAGGTAAAAATCTTCTTTACATTTTTTCAACC CATTCTTTATTTCTTTCTCCCATCCATCATTTGACTCCAGACCgggatca atcgaacttgtcaaaCCAATCAAATAATCAAAGTAATCAAACTCCAACAA ACAATTAAGattcaagttaaaaaattaatcaaactttaagATTTTTTGCT CCTAACCTAAAGTTCAATCACAAAATGGGTGTTGTGGTTCAATCATTTTG ATAACCGAATAAAAAATTTAGTTCCGTAAAGTTTTGTGCCGCTCTGCTTA ATATCAGCTTTTGTTCAAAGTGAAATTCAGAACGTAAATCAGGAAATTAC TTCTGATAACAGATACAGCAGAAGTAGTATTCTGAGGACCCTCCCGGCGC CCCGGAAACTTCCAGAGTTTTCCggagcagctaaaaaaacaatatttttc tcCCCGGGGAAAGTTTCGGAGCTATTGCGGCTTTTCCGGAGCAAGTGATT CTTTTAAACACAGTTCCGGAGTTCCGGTGCGTGCAGACTAATCACCAAAA ATCGTGCTCCGAACACCGGAAGTGCTCCGGCACTTTTTGCTCCGGACGTT TCCAGATTGCCGGGAGGGTcctgtatagaccttttttcaaagatgacgtc ctgttgaataattatgtagtccagccataaaaacaatgatagagccatgc ataattactgtatcatgcatatttattaattatgcatggttttatcattg tttttctgctggactacataattattcaacagggtggcctctttgaaaaa aggtctattctgtCACTCCGCTGCTGCAGGCAAAATCATAACAGAGAACA GAGGGGTCACGGACTTAATTCTGGATATACAAATATCTGACAAATATCAG ACAGCGTTGTAAAAACGTAAAATATAAACAATTACTGGGCTCAATCCAGT CATACACAATGTCTTTTTTCCCAAATGTGGTTCAACTATGGAACAGCCTT CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTATTTACC TtatatttatattcttttcTAGATAATATTTGTGAGAATAGGTTTTGTAA CCTCCTGTAAATTAtcgaatagaaatagaaatagaaatggttAGGATAAA TCTCAAGTCCAGGGACTGCCATAAATGATAATCACGTGACACGATAAATT TATTGCAAGTACTGTAATAAGGAAAGGGGTGAATATTGGAtattatcgaa gtaatcaaaCTTTTTGACCAAACTAATTGAACTTCTAttctattgcttca aaaattgtgagtgttcgattgaGTTTGATTAATATCTTTACCAATCAACC Tttaatttatgaaatttggttaagtcaactgctctaacttgggactatct ggcAAAACATGGGAAGGCAATTCAGCCatcatttcaccgaacctccaaag tcatttgatttgagttaacaacggcgtattaaaaaatagatGATTTCTCT TTAGCACTGactaggcttttaaatcgaaatatgaaaaaatctgtagtgga acacacgtgaGTCGgcgagtgtctgtgcactctaagaggaacgaagaagt atgatcaggggggggcacgcagttactacaagacagtatgacacttacta ccgtggtggtactgtattcagaagttatgaaaacagttactacacagtgt agtaactgctgtttgggggtggtgccaaacactaaaactagcacttttgg tgtagtaagtgcttatattttaattctttttaaagcagtttaaagaactt tcaaaatttttcacaaaaaatgaatttttttgtgaaaaaattctttgtta aaaaaaatatttttgttataaatggacgaaaaaaatttgaaatttttctc agaccaaactttgaaattatgctttccctaattataatcaaaatgttctc aacagctgttaaccaagtaaattaaaagaaaatctagcacaaaaatggct ttaggttgaaaaataatcgcaatttagggtaatttcNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNcaaggtgtagtaactgcaaagggtggtggtcct gaaaaaaagtgttgaaaaagcacttactacacatcatgtcttgtagtaac tgcgtgcccccccccctggtatgattgataaacttggtggagttatcaaa acaaatttgttgtcaatgagatttaacagtaagtgaagatacagaccaga tatcaaccagtcccatgttttgaccaattgtcccaagttagagcagttga cagttcATCATTAAATAGTAATCATTTGCAGCTGGATTCACAAACTTTTA ACTAATTATGTATCCTTTGTTGAAGAAAAGAACGATATAACTTACATTCA GTTTTTTCAATTGATTTGTTGTCAGTTTCCAGTTTTGACATGCATCAAGT AAGTTGGCTCATCACAAAACTATTCAAGAGGAAATTGATATGGGTGCAAA GGttgatttgttgattttgaagCAGATTAGTTTCTATCTATTTTCCCTAT ATCATATATAAACTACAAGAGTGTTTTATAAAATCGAGTCCGCAGAAATT AGCAACAATTGATTTTGGCTCCAAAAATGACAAAGTCATTGTTTTTTGCA AAACCTTATTTTGAATTGCTTCCAATTTATGGGATGCATCTTTGGTGTAA GtttcattatattttgattATTACTTTTTGAGATAGTTCTCATCAACGAT TTATAAGACAGCATAaagcagtttttttttcttaatttaaaaaaaagaca aaaaattattttttttaacacagACTTATGAAATCTACATCCTATACACT TCTTTAAAAGATAATAAATATCACACATAAAGCCCCCAGTTTCTTTTGCT TTCGCCTTTACTTATGGCAGTTTTGGATATGCCATAAGTTACACAACATT TCCTTCTTCCATTTCCAAAGGCATTTTAAAGACAGCTCATGGGGTAAATT TTGGGGACTTTTCTGAAAGTTTCTCAAAAAACTatgacttaaaaatattt ttagttttaaagattcctttgtatgaTATAGAAAGGAGACCAGCCTCTTA TGCTTGCGAGTGGTGGTGGGAGGTAAATGGATGTCTTTATAAATTTACTG TAGATAAATCAGAAACTTTCTCGTTTTAGTTCAAGTGATGACCAATCAAA CTCCTGGTGGGGTGGCTGGGGTCAAGGATGGATAGACTCAGTCAAAGAAA AGGTTAGAGCTTTCTATAATATCTCAAGTTTTCATGTCATTGGTTTATCT GTTAGTGATAAAATGGTTTTATGTTAAAAAGGACTAGacaataaaaagat aatttcaacatattcagaataaagaaaaatgttttttgcttcTTGAGTCC TATGTCAGAAACCCATTCATAAAATGACCGATTCAGTTTTTTTACTATCT agtatgatttttttatttctaattgtttgataaaaatataaaatagtaTC TCTATTTAATATGTATCCATTTAGTCTGCTTCTACTTTGGAAATGGTtaa gaaagatttgaatgaaTTTGTTGAAGTAATCCAAGGGGATACATCAGTCG CCATCAATGAAACTGCTGACAAACTCGATGAACATGTTCAACAGGTACAC TTTTTATACAattaaaagaaaagatttaacACATTGatattaatattttt caattaataCTGATGGCAATTTTCCCAAAGATTTGAATATAAACAATTTC TTGATTGGAAATTTCTCtcctaaatttagaaaaaagagaACACAACAAAA GAAAAGGATGATTTGGGGGATACAATGAATACAACAGAACTTGTGACACA AGGAGTGAAAGGTCTTTAATTtgtgtttttgtctttttattttattattt ttctgctCACAATCAATAAATATTTTACATCCTATCTAGATCTTTCGTAA ACAAAGATGCTTTGTTGTTTATGATCTAATAGGCCATAAATTATATATGC TTGGTATGTTTTTAGCCGGACGATCTCAATCTAAGGGGATCAGCGATCGA ACCCGATCAAACGCAATTGAACATAATTGAATGTAAAATCTCAATCGAAG CACAGTTAAATCCTGAAGATTGGGGTAATATTTGATTcagattcaattgc gttcgacaatcgaatttcaatcattcaATTGCATTTGATCTGGTTCGATC TCATGTTCAATTAGTTCAATCGTCAATATCCCATTCGATAGAGATCGTCT GGTTTTAAGTCCACCAGATAAATATGAATTAATTACATGTGGGGAAATGG TATATTTCTATCTTTTGTAAGAGTGATCTGTGACGTTGTATTGTATATtt tcacgcttttttttattagGGTTATCAAAGGTCTTACATTCAATGTCTGA ATTGATGTCCATACAAGAACCTGATGATTCTAACGAAGAGTTCATCACAT TAGCTGAAGGCTCCTTCTCCCTTCAAGGCTACAATAGAAAACAGGTAGAT TTAATTTTCAAGTTAGTTTTAcagaaaatataaataataacCGTTTTTGT GCATTGACACAGATTTTTCATGTCAATTCACttaaaagttcaacaaaatt tgaatataaatcttttttaggaaaaattgcATATGCTTCAAACAGATCCA GGAACATACTGCAATGAGCCTGAAGGTGCATTTCAATTTATTCTTTCCAT ATTATCTCAAAAGTGAAATTACTGTTAGTGTTGGTTAAACAGAAAAGTGT TGTTTGACAATTTTTAATGCTTTCAAAACCAGTTGAGAATTCTTGTGTTA TCATGCTCCTGTAGAATCTCTATAAGCTACAATGGGAAGGGTCttattaa attgtttttttgttttattatgtTTTATAGGAAGTTTCAATGATTGGTTG GAGGTGTTTTCCCTTGATGAACACAAGGAAGACATGTCAAATCTTTTAAC ACAAAATTCTGCTGTTCGAGCAGTGTATTCAAAATTGGTAATAGTAATTT AACTATACATAAAGACTAATTGCTTTCTGTGATGTTTTGacttagaaaaa tttatttttcttgttcaaTCTATTTTTAtatcaagaaataaagaactaac ttacAATTGGTGTTTCTTTCTGGCACAATCTTCaggaaatattttatttc agtCTATTTTTATATAAATGATGATAAACTTGTTTACTCACTTTTTCAAA GCCAATAAAAATGCTGACTTGTTGTTGTCTTACAAAAGGTAGCTGTTATT GAACctctttgaaactaaatttttatAGGTTCCAGATGTGTTATCACACA CTGCATTTTGGCAACGTTATTACTTCAAAGTTTTTGAGTTGGAGACTGAA GAGAGAAAACGTGAAGAATTATTGGAACGTGCAAAGAAATCAACAACTCA TGATAATGGTGATGAAAGTGATGATGGGGGCTGGGGTGATGATGACGATG GTATGGATATGTTTTTCTTTCAGGTTTTTTTTTGTCCTGACTTCTCACTT TCAGAAGTCTTAAATCAAAGTCTTTGATTGAGTTTATATCTTTTTATTTG TCTTAAGACTTTTTTGTTCCTTATTGATATGAGGTAGGAAATAATCCAGG TGATGTGATTGTGGCAAAAGTTGACAAAAGTTGGTATGGGctacaatcct tcaagaaatatttgagacaaatgggaaattccccaggaagttttgaaacc acaatcgatttgtaagtgctctaaagtaggttcgaagggtagagttTTAA CTCTGAGTTTTAACGCTAGACTTAAGACTTAAGAAATATTCGATTAAATT AAAGAGATAGCCCAAAATTGGCTTTTTCGCCCAAACTTTAAATCTCGAAA AACGTCAAAATAACCGGAATTCTCAATATATTTCTTGAAAGATTGTAGAT TATCAGAATCTAACTTATTCTATGATAATTTCTTTGTAGATATTGAAGTG GTTTCAACTAGCATTGCTGCAACTTCCACAAAACAAGAAACAAACAAAGA AGAAATACAAAAAACTCCTATAAAAGATGATAAAAATATAACAAAAAATA AAACAACACCAGAAAACATTACCGAGCCATCAGCTTTGCAGATGATGTCT CCACCTGTACAAAACATGCGTGATGAACCGATTAGTTCTGTTGAGATACC TAAATTGGATTTGGATGAACCTAAAGAAACACATTCTTTTGTAGTTAAAG ACACCAAACCTGTCGAGATGTCAAAGCCTGTTTCAGAAGCTCCTAAAGAG ACTGTTATTCCTGTAGACTTGGATACTAAGAGTGAACCTAAAGCCATGGA AAAATCTTGCGAAACGATAAAAGATGACAAAGAACTTGAAGTTGAAGAAA ATTTTGATCAAATTAATTCGGTTATTCCAAAGAAAATTAAAAACAACAGT GATATAACACGTTTAACCCCTGAGCTTGAAAATACAAATAAACCTTCGGA AATTTCTGAAACAGCAAGTGTTAGCTCTTGGATGAGTATTGATGATCAAG ATAATATGAAAGTTAAGAAAATCAAAGGTGAACAGACAATTAAAAGTGAG AATTCAAGGCCTGTTTCAGGTATGCAATTTCAACGTTTTTAACCTACATT CTTAAATGTTGAAAACTTGACACTTCTCATATCGGGAATATTTTTACCAC CTTCTTTTCATTGAAAGCATTGTACCATCCTTTGTTCAGGCAGACAATAC TAATCACAAAATTTTGCTGTTATCAGTCTTATCTTCAAAGATATATTCCT TACAAGCAACAACGTTTTTTTGGATTTTCTTCAAATACTTACAGGCAGAG GATCTGGAAACCCTCCTTAATTTTTTTAATGGTTAAACAAAATTTTATCC CTTCCTTGTTTGGGATGAGAAGATAACATTTATGATGGTCAAAGTTTCTT GATCCTAGCCAAGCAAAATCTCTAATCAGAGTTTTTCGAAACTGGTGCCT TAATGGCGGCACTACCAAATAATAACAGAAAATTTCATTGAATTATAAAT TGACCCGGGTAGTTCTACCATTTTAAGGTACCACTTTTCAAGCAAAAAAA GAAGATATAGCTCCGTCAAGGGTAAATAAAGGTCAGTGCTAGATACACAT TCTTATTTTTGTAACAGATGGAGGATCAAGCAATTCTAGTGGTGTGTTGA TCAATAAAAGTGAAGCTGATGATCTTGACGACGATGATGATTTTGATATT GACCTTGATGAAATTGATGACGTCAATGATGAAGAACTACAAAAAATGGT GCAAAATATCAAAGAGAAATCTGCTAATGGTGGCTTAGAGGTAAAAAGAT AGATATTCTTGAGTTGCCATTGAGTATCTTTTTCGTTTTTGGCACATTTA ATTGTTGGTTCACTGGAATTTCTATTCTAACAGTGTGTTTTTTCTTTTTG TTTAAAACCAACACTCTTAGTTCCTGCTGGTCACAATGTCGTCACTCCGA AAAATGAGATGTACCGCTATTCAGGGTCTCTTCTTCAGGCTCTGAGAATA TCTAACAGGGCCAGACAAGGCTTCAATTTGAGAAGGGTACCTGGGATCTT GTTTTTGCAAGAATTATTTAGCAACTTTGGTGATTTTTTTTCATAATGTT TGTATAAAACACTCATTTTTAGGCAAGAAAATAATCAATTTAACCCTCAT TTGCTAAAAGTTAGTTCCTTTAAAGTGTGTTTAACTGATCCAATTTATAT TTTGTACAGGATGAAGATGATGACTGGGAGAATTGGGAAtgaatgacgtc attacgatgacaaaagaaaaatatatctttATTCATTATACTTTAATATC AATCTGTCCTATAATTTAAGACTGACCTCTGGTAACTTTTTCGGGTCATC GTTTTTTTCTTAGTTGACATGAATTGAACTCAGAAATACGTCTAAATGTT TTAGATTACGTAGAGCATTTTATTTATCAATTAACATGTTTAGAATGCAG ATGTGAATGGTGTGCACCTGAAGCTGACTTAAAGTCGGGCAATAACCTAA AAAAGAACGTTTCAGATTTTAAAACAGCCAGGGACCTACTTTAGATTTCC CAACTCAtatatactttatttttttatgttgttttttcgttgtttttagc gttatttttttgtaaatagaaaaaaaaatctgaatttaaCACTCTTTATA GTATTGCTGCTGATTGTTTCGTTTATCCCTTGTGTTAATgataagtgaaa tttttcaatttttgcggATTTGACCTAATTTGATTGCTCAGAATATTGAC GTGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020679TCONS_00020679Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020679-proteinTCONS_00020679-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000363supercontigsc0000363:194046..203199 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
75.39 69.45 56.94 52.21 44.98 34.05 48.48 51.73 40.63 37.49 39.03 40.82 30.18 30.43 24.33 27.54 33 34.88 26.94 29.16 43.07 42.05 44.37 46.47 47.37 49.86 33.92 22.33 33.64 36.52