XLOC_011577 (gene) - C. hemisphaerica

Overview
NameXLOC_011577
Unique NameXLOC_011577
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000359:310733..318916+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011577 ID=XLOC_011577|Name=XLOC_011577|organism=Clytia hemisphaerica|type=gene|length=8184bp|location=Sequence derived from alignment at sc0000359:310733..318916+ (Clytia hemisphaerica)
GCCATAACAAACAGTACAAGCATATTATCTATAATAAAGAACTTATGAAC AAATGATATGGATGGGAAACAATTGCATGGTCTGGTATTGAAGATTACTG CTGAACTACAGCCATTGTGTTCATTGTTGGTTGAAGCTTTTGCATCATAC CACAATAATGACCTTGCTGCAACACATTCACAAGCCTTTGCTAAAAGGAT GAAAGACACATTCAATgatcagaaaaagaaaatatattcatTGGCGACTA GCAAGTTTTTTGACAATAATAATCCTAACAAAGATAATTTGAAAAAGGAT ATTGAATTTAATAATCTGGATATCCAGGTATTGTTAAAGCTATTgattga aactgattttctttttgaaagagACAAAGGGACGTGTGGTGTGCACCATA GTGCTAAATGTTGTAACTCTTGTAAGCATCAAGGGAAGAGATGCTCATCG TGTAATTGCGACAAGGCAGACTGCGGTAAATTATGCTGCAAATTATGTGG GAAATGCGTCAAATGCAGCCGTGATaaatttgaagatttcaaaGAGTTTT ATTTGAGTGGCAAAGATAAGAATTGTGATATTATTACAATGGAAAATTCG AATCTTTGTTATATGGCTAATCTAAAAGCAAGCCTTGAGGTTATGTTGAA ATGGCGAAATTTATTCCACGTAACTCGCGAAGAATGTGAACACTTTGTTT GTAATCGCAGCAAATCTCTTGGTAATAATTTTAAAGACATCAATGGTGGA CAAGATGAGCTGTCTAAGATTATACACATGGCAATCAAAACAGTCATTAA ACTTTTATCCGACCCAAATTATTTTGACGGGAAAGTTGACTTTCGCAAAC AGGTGAAAGGAATTGAAAACGAATTTGATGAAATTATCGATACTGATTCG AAATTAATCCCTATCGAAGAATCAAACAGCAAAATGACTCGAAATATGGG AAAATTTATGGATTTCATAAATGGtaagaaaaaatgacttttattCCATC ACCcatagtccccccccccccggaaaccatttttccaatttttgatgGGT GaggtgggaaaatgaaaatttgaatagtaaaggggggaaaaaGAGGGGGG ACATCGATAATTGGCAGGTTTGGTGGGGGgaagttgttttgattttattt aggatcttaatttttcatttcattgttgttTTAAGTCTGCTTTTCTAAGc atatttgtttacattaacccattttcgttctattttgtctagtattcctt ttgcagcaaaattttacgtttgtgtcaggttgaaatttgagaaatttata tgggTGTATGGGGGAGACTtatattttctgaattttctgggggagaagca aaaaagaggggaggactaaaaaactgaaaagtcatagggggaaaaaaGAG GGGGGCGATTTAAAAGAaccaagaatttggtggggtgNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNgggggggggggggcctggaggacactatgatcaCCAT TAGGTGTTCCTGTATTAAGGCTACTcaggagaagaaattttgtttaaaaa gatcGAGTGACAAAAATCCTATTATAAATCGAGAATTCAATAAGACCCCT TGATTTCGTAACTCTTTTCCCTTGTAAGTAAACTACCTCTATAAGCATAA CGGTTACAACTATAAGCACTCTTGGgctcaattttgtaaaaaataaacct aatgctaaaaaaaaaattgtgcaaGTTTCCTAAAACGCCGACCTTTTTAG GTTTACTTTTGAAGCTCTTTGAGCTTTTTCGACCAAAGATTTTCGCCTGC GGAgccaaattacaaagaaaatcttcatgaacccaataaaaaatcaacaa atcgaaCTATAAGCATATAAATCAAGCATAATAATAATTAAGCGTAAATT aatgctgaaaatgagattttgatataaacatATTGAGCCTCGACCTGATT TTCCTGTATGCTTGTAAAAAGAGTGTACTTTCTTAGTACTACCCTATCAA TCTTTGTTGAACTATATAATAAtctaaaccttttttttttctagatGATA AGAAGGAAGAACCGTTTATCAAAAGGTATTTTTCAACAAGAATTTGATAC AAAATCTCATGTGTTGTCTTTGACTTGAAAGACAagaattgttgtttttc ttgcaACTTCCAAACTTACAAtgatgggctcttccagaaaatgtccgttt GAGGATATAGTGTCAAAATTTACCTTGTCCGGTGGGTAAATTTGTTCTGT TCGGGGTAATTTCGccctgtttgagggtaattttgaatatccaaggggtc aactgatgcttgtccagggggtaagacCTGCTGTCCAGGGGGTCACAATG TCCCTGTGGTAAATTTCCAAGAAATGtcatatcctccacccccctcccaa tattcaatttttttctagaaaagcccaATCTAACCATCTCAAAAGATAAA TTATGTGActcattgttttttgttttttttttattccaagGGAGGAAAAT AGAGGGGACATTCAAAAATGCCCTCAATCTTTTTTGCTGCTGTGAccatt gataaaaaattattcgaaaaaataaaaaattatcccACTCCTAATTGCAG GTGAGAAATCATATAACTAGTTTTAACTaacgttcttttttttcaaattt ttatacagATGTTTGACCCTGAAACAAATATCTACAGGAAAGTGTGTGAT AAGCACTCCAGATAAAATCGAACAACATTTTAATTTGATGGCTCAATGTC CTGACAAAGAAGAGTTGACTTTAAAACTTGTCGATGATGGAGTTGGAAAG ATTGGGAACTATCGAATGGTGGTGCAGGATCAACAAACATATTTAGTTTT AACTGGAATACGTCTCAGAACTGGATACCAATACCGCtttgttctatctc aaaattcCAATGCTGTCTTCCATTCACCAGATTTTTATCCTAAGGGTTTG TATTCATCTCCATTTCTATATTGTACTCTCAAGTGTCCAATAAACATTAG AACGTTCGATTAGGGAGTGTTTTAAGTGAAACGCTTGACTATTGACATCA TTAATGCTttgtttttgcctctaggtatataataaaacatatattcaata ggttttcgtcggttattggatttattaaccctcggtgatgtatattcaac tcggcttcgcctcgttgaatattacatcacctcgggttaataaatctcaa ctagccggtacccggcgtcgcacgccggttaggctgtagctgaacgcact aaaagtcctttggatgtttaagctggcttaaaaaaaacgatcaaatgaat aaaatgatatcttcaaagtttgactctaatcttcccccggagatcttttt ctcgcttcgctcgcattaaatacgccgtccagttttCGACAATCTGAGAA AATGTCCTGGTAAAGAGtagtgaaatgtagaaatgacaattctttaggaa aaagcgggaaagccacaaagaatagtgaaactttgtttttatcagattta aaaaaataaataagtcaattctgtactggagccttatccGGGTGCTTGCC TAGCAGACGAATAAGACGCAGTGGGTGAGTGAGTCTAGACTACGAAAGGG GCGGGCTAAAGGAACCTAGGGGAGTAGAATCTAATCCTATTTGTAGACAG GAACGGGAGACTATGCAGTTACAATAAAACTAATATTTAACAATGACAAC GCTCTACAATCGTGCTATAAATAAGAAAAGAATACTTACAAACCTATGTC CTGAGCAGGTCCGCCGCCGATCGCTGCCAAAACAACACTGAAGTTTAGGA GGGCTGGACAGCAATTGCTAAGTTGCTGCCCAGTGGAGCGTGGAAGGCGC AGTTGGGCGTTAGAAGGGCGCTAGATACGATCAGTAAAGGTATAGCCGAA GGAACTTTAGTACAATTCTAaattgctttttttaaacccttgccataact tttcgaatttaaacatgtaaaatgaggtacacagtttttaacagtatcaa ccacttgaatgtttttatatgaagaaagagatgAACTACTtaaatgggat aaactttcgcggggattaaatttcgcggtttggcctatccgcgaaattca aaaatttcgcggggacttaatttcgcggatggcactNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNATGGcggcaagcattttcagtggaccatggattttc ttcatcatccaaaattcaaatttacagctttctaccctttattttctggc agAAAGTGGTATATTTagtttgttgaaagtattatctttcaaattctcct tattatagcctctaaaattgacattttgcagatattatgcattatgcatt atgtaatatgcattatgttttatgcattttgtacctgccgtttgatttac atttgaaatgttcttttctataaaagaaacttgttttgttttgaaaagaa ttcgaatgtcattaataaatacgatcgttaatacattcgaaaacatttca aacaaaagaaaatagaaaagcaGGATCGGGCAAAGctaggcagaaattaa aattactaaatgtagattggccttaaatttcaaaacaaaggctgaataaa gtctaaaccaggctctatccgatctgtcgatcaaaacaaacttatagaga acaaaacattgcttacgagatcgaaagtgacacactaacagacatacaga ctacggctattaatatatagataaccgacttttacctattgaatattagc ctgggaatccaagctcataatcttagaaaaacaaaaaatacctcacctca caaagttctaagattatagagcttggtgcaggtagattagtctgacatag aatgttataaacagtctgtgtgtgaacccttgttgacagattttctgagc tttggaaacccaggcaaacacacataatcaacttactaTAAAAACTTATT CACAAGCtgtaaagactttcaaaactactaaaaaccacatcaaaacgtCA GCCAcgtgtatttagacttccagtcaacagccattttgtttctaaatgaa tctatgtttcattttcatttgttttccttttttctgcagagtcagctttt ttcataaattatacgCGCACATCGAAATTATCGAAATACGCGCAAAAgtt actgctaagtaatacgccaaaagctggccaatcaggccgaacctgcattg cagggaaaaatctccctgcaggcgagttacctgcgccaagcgttaaacaa gcagcaaaaatatcataaactagactgtgaacaaagcttaacgcttggat tcccatgCTAATTGAGTATCTGCTTATTAGAGTACTTCTTAGAGAAGTTG GAATAAATTTTGATTCGTGGACGGTGAAATCTATTGTAATGGGATCTGTC GGTAGAACTGTTTgccataaattttattttcaattgcaCTAATAAGAGAT CTGCATTTTACATTTTAGAGGTATCTGGAGAGGTGTTCCCTACCCCATGC AGCAATTTTGTCATCGCCCACAACACTGGTCATTCATCCTCCTTTCACCA GTACGACACGTCACAAAACAAACCTAAATTCAAACCACTCAATCTCATTC AAGGTGCTAAGATATACATACCAACAGCAAAAAGATTTCACGAAATCGCG TTAGAATACAAGCAAAATAACAGCCGATATGATGATTGCTATCCACCACA TTATTTACTCAAACAGGAGACGATCAAAACATTGACCGGCTATTTATCAC AATCaaagaaaaacctaaaaatGCTTGTGGGTTATAACTATATGCACCAT TTAAAGACTTTTGGATATACAGATAAAGATCTAGAAGGTTTTGATCACCA CGATGCTCATGATGACACGATCGTGGTTTTGGATGTTAACCAAAAGATGA TTTACTACATAAGAGTGTTGACAGATCAAGCTCCGTCGATAGATGACTAT TACAAAGAAATAGGCAGATGCGACGACTATGTCAAGTCACTCTTCATGTT ACATGGAGAAAGACTAACAGACCATTCTATAGGCGTCTGTTCGTTGCTCG CTTTACCACTGGTCCAGCTCAAAGACTGCGATCGTAGCCTCTTATCCGTA TCAGAAAACTCGAAAGAATGCTGTATTCTTTTCAAAGAGCATCTTGAAAG TAAAGACAGTTTGAAGAAAGAGTTGGATCAATATCTTCACCGTATTCATA CGATTCGAAAGTCATCAAAACTCTCAGCAAATGGAAATCACTTTGAGAAA ATTATCGCTGAAAGTATGGCCACAATGTCTTTACAACAAGCATTCTTACC AAGACTGACTATGGATACACAGGAACAAATATTATCTCTTTTCTTGAACG GCGAACAGTACGAGGCTATCAATCATCCAAATAACAAACGCATCATCAGG GGTCCATTTGGGAGTGGTAAATCACTGGTCCTAGAAAAGATAGCGGAGAA ATTATACGACTCTATGCAAGAGGGTATCATCTATTACATATGCTATGACC CCTACAGCTTACTAGATGCCAGAATGGAGGAGATTTTTAAAGAGGTGACG GATAAACACCAAGATCCTGGAAATGTTAAGTTTGTCACCTCGACTGTGTA TCAGTTATTGAAAGATGCTGGTGAAACAGAAACCATCACCAATGATCTTG TCAAAGTGATGAAACACTGTCTCCAAGAAGCCAATGGTCAACAAGTCCAT TTCCTCTTTGATGAAGTGGGTATCCAGTATTCGTATTTTACCAAAGAAAA TGCTGACTCTTTGAAGAAGTTCGTGGATGATGAATCATCTCTGGCAATGT CGACTATCATACTTGCGTTGCAATGTACTGAGAAGGAATTAACTGTGCAT GATGGTAAAGGCTTAACTGTTGAACTGAAAAATTACNAGGAATTAACTGT GCATGATGGTAAAGGCTTAACTGTTGAACTGAAAAATTACTGCAATGATC GGATCAATTTGACTGGGTTAGAATTGTTACGGCCGCTAACAAAGAGCATG AGAATGGTAAAgaatttatacaaacttaaaGAAGTTGCCGAAGACAAGGC TGGTCAAGATTCAGTTGTGACAGCTCTGAAGAATAATGAGATTCCAAGGA AACCATCAACTCCAGATAGCAACATCAATAAGAAAACTAAAGCTGCCAGC CAACCCAAACCCTCGATTCAGTCCACGACACTAACCACCCCACCAAGAAA TTCCACTACATCTCTCAAAAAGATAGATCCATCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020638TCONS_00020638Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020638-proteinTCONS_00020638-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000359supercontigsc0000359:310733..318916 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.59 0.89 0.43 0.33 2.42 1.83 1.88 2.04 1.16 1.6 1.21 0.65 1.29 0.85 2.23 3.9 1.8 2 2.34 2.55 1.25 1.56 1.47 2.34 1.88 1.68 1.49 1.3 1.79 1.64