XLOC_011283 (gene) - C. hemisphaerica

Overview
NameXLOC_011283
Unique NameXLOC_011283
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000348:287291..291864-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011283 ID=XLOC_011283|Name=XLOC_011283|organism=Clytia hemisphaerica|type=gene|length=4574bp|location=Sequence derived from alignment at sc0000348:287291..291864- (Clytia hemisphaerica)
AATAGGCGTACCCCCTGTTTATTAATTTTTTGGAAATTTTCTACGCTGGA
CATTCTTATTCAAAACCGGTCGATCAGACATAGAAGTCGGTTAATTGATA
ATTAAATCGATAATCATCAATATTAATTGATGGATAATCAATAGATAATC
GATACTCACAATTTTTTAGACCTTTAATTATCTAAATTATTGCAAATAAA
CTAAAATTTTGACTGATTAATTTTTGAGTTATTTATCTCAAACCTTTTTT
TACTTTAAACTGAAGGGATACACTCAGTCGAGTTTTTAGATGAGTGATAA
AGTTTTCCTTACAAAATGTCTGTCAAATCATCTCCAATGGGGTGACAAAA
ATATTCCCAAGAGTGAGTAAGTTTTCCCTCATAATTAATTTTATAATCAG
ACTTTCAGCTAACCTATAAAATGTTACTTACATGGGGGTTATCAAAAAAT
GGACAAGCTGGACCTTCAACAAATGACAAAGTTTTGGTACCACAAAACAT
CCCAATCAAAAAACAGTATGGTCAAATAATTGATATCTCTGCAGGTGGTT
TATTTACTGGCGCTCTCACAAATAAGAATTATTTGATTTCTTTTGGATGT
GGAAAATATGGACGTCTTGGATGTGGAGATGAAAATGATCATACAAAAGT
CATTTCTAACTTAATATCTTCGAATAGCAAATTAGCAAAGGTAAAAAGAA
TTCTGAGCGCCATCTAAATATCATTTTCTTACCCTGATTTAATTTTAATT
TATAGAAGTGTATTTCTCAGTCTATTGACCTCTATGAAACAATCTTACAT
CTTTACAATTTATAGATCTCATCATTCCATTCGTTTGTCAATTTTAGTTT
GAATTTCCCTGACCTGATATATATAAAATACTATTATGACAGTTAAGTCA
TAATCAACCAGTTCCAGGAAAGTTTGATATTTATTTATTTATTGAAATTC
ACACTTTTTTATAAGAACACAAGACTGAAAATCGGCCAAAACCTAAGAAA
AAATTGAGAACAAACTGAGCCTCAGATTTCATAAATTGTTAAAACATTAC
TGATTTTAACAGATTTTAAACTATTTTAAAAGTTTTAAAGAAACTAAGCG
TATTAAGAACAAATTAAGAACATACTAGCCTGAAAATTTCAAAAAATAAG
AGCATCTCTGTTTGAGCCAAAGATTTACTGTTTCTTATAAAAAAGCTTGT
AACTTTATTATTATTTCATAACAAATTCAACAATACTGTTATAAGAGGTA
TTAATATTTTGTACGCATTAAACAGCTCAATCTTAATAATCAGCATTACT
TCACATGATTTAAAGATCATGTTCCTAAAATATTAAAAATTTGTTAAACA
TGTTCTAGATTTCATGTGGATTATGGCATGCTGCTGCAATTGACAATAAT
GGTTCCCTGTATATCTGGGGGCACTTAAAAGCTTGTGGGACATCCTCAAA
CATGACACAACCCTCACTTGTAGATCTCAATAAGAATGTTATTGGCATAT
CATGTGGATTCAACTATACTTTAGCTTGGACAATTGAGGGTGTGGCATAT
TCCTGGGGATCTGGTAATAATGGCGTGCTCGGACATGGGGATATGGCCCA
ACAGAAAAAACCTAAAATAATTGAAGCACTGAATGGTCATAAAATTGTTG
ACATGAGTGCTGGATATTGTCATTGTACTGCAATATGTGAAGATGGAAAA
TTATTTACGTGGGGAAAAGCAGCTTTTGGTTCATTAGGAAATGGATCAAC
TTCTAAATCAGATGTATTAGTACCACAATTAGTTACTGGTTTTCAAAACG
CCAAACAAAGCAGCTGCTCAATGGGTGAGAATCATGGTCACACTCTTGTT
GTTAATAAGTCAGGCACAGTTTTTGTAACTGGCGATGGTTATAAAGGTAA
ACTTGGCCTTGGGGATCAAGAAAGTCACACTACCTTTCAAGAGATTCCTG
GAGAAAGTTTTGGTGGTGAAGCGATAATGCAAGTTATGGCTGGTGGCATC
AGCAGTGCTGCTTTAAGTAGTAAAGGTCATGTTTTTACATGGGGATGTGG
TAGTGATGGGAGACTTGGACATCCTGAAGCTGAAGGTCACCGCTATTTGT
TTCGGTCTGATCAACCAAGGATTGTTGAAAGCATCCAAGATATGAATTGT
AAGAAAGTATCAGCTTCTTATTACCATATGGCAGCACTCATTGATTGAAA
AGATACTTATTTTTTATTGATTATCCAATGAACATCCATTTGCATGAAAT
AGTAATGAACTCGATGAATGATTTTTTTTACAATCTTAAAAGCTCATTAG
TCAAATTATGTCTTTTGAATACACATCATCTACTAAATTATTTTTTTTTT
AATATGCTAAAAATCTTTTACAATTTATTCGTGAATCTTAGACATGATTT
ATACATATTGAACTTCATAAATTTCTGGAATATTTGAATATTTTGTACAT
GAACTTTTCTTTGTAAATTATAGATTTATATATGTAAATGAAATTGAAAT
TAGAAATAGACATGGAATTCTCCAAGGAAGTTTTTTTTAAAGGAATGTTT
TACTAGCTCATTGCTTTCTTGCTAAAATTGACTTTCAGTTTCTTATAAGT
AATGAAGTAAACAACTCTAATAAAACCTGATTTTGAATTTCTTGTTTAGA
AGAATAATACTTTTTATGTCTGACAATCAGCAGTTACCAACACCGCCTTC
ACCAAGCTCCAGTGATGTTAGTCCTGTCAAAGGAGGTGCATTCCTCTTCT
ATGTCACCTTAATCTCTGGTCTTGCTGGCTTTGGTTTGACAGTTGCTAGA
GCACGAAAGTCAGCACCCAAAGATGTAAATAATTTGAACTCTGAAGGAAC
ACGGTTAGCTTTACGAGCTTTGGGATATGGAACAGCTATCAGTGTTACTG
GATGTGGTTTGTTGATTTTTGGAGTGGCAAAAGCTCTTGGTGTCTCATCT
GTTAGTATGAACTTTTCAATGCCAAGTTCTTTAATCACACAACATTGAAA
TCAGAATAATTCTAAATTTATTTTCATAGTCCGGGCATCTTTCTGATCTC
TCTGTAAAAATACAAGAAAGAAACTACTGTTATGTAAGCAGATTATTTCG
ACGTATCTGTCACGTCACTATCAACTAAATGTTATAGAATGTTTACAAAG
CTGCCTAACCTATAATGTTCACAAATTGGATTGTTTTATGTCTCTTATAA
TTTTCAAATATAAATTGATTTTAGGCCAAAGAGTTTGGTTTGAAGATGAA
AGGGGTTATGCCATCAAAGGATGGAGAATTTGTTCACAAGTTTGATAACT
GGCCAACAAAGATTGAAAAGAAGGAAGATGATGGAAAATGGAGAGAAGAA
TTCGGTTAGTGTAAAACGCAGGTCACAGGTCACAGGTCGCAGGTCACAGG
TCACAGGTCAGTGATGACAGGTTAACTCTAATCAATGTCATTGCAGAGGN
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NNNTTTATAATATCTAAATAGCATGTATTACTTTTTTGTAATTTAATGCG
CTATGTATTGATGTTATGTTATGTATATGTTATGATCTTATTTTTTTCCG
GTCTGCACTTTGTTGACCTGTGACCTGTGACCTGCGACCTGTGACCTGTG
ACCTGCGTTTTACACTAACCGAGAAGAATTCAAATGAGATGATGATAATG
AGATTTTTTCATCATAGAACTTATTGGAATTGCTTGGAATTGGCGAAACA
CTTGAGACTAATGTTATCAGTTCTGCTGAAAGACTCTACAAACAGTGGAG
ACCTGGGTGACTGATTTCAATAATTATTGAACATTGAAGTCACCATAAAT
TACCATTTTAAACCCCATAAAACACTTTTGTACTATATTTTTGTTGTAAA
TTCTGAAGAAGTATAAGAAGAATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00020078TCONS_00020078Clytia hemisphaericatranscript
TCONS_00020077TCONS_00020077Clytia hemisphaericatranscript
TCONS_00020076TCONS_00020076Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00020076-proteinTCONS_00020076-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000348supercontigsc0000348:287291..291864 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
52.62	53.53	40.84	38.76	27.98	27.34	36.6	40.05	37.74	30.19	34.61	27.57	32.2	32.09	26.7	27.23	40.77	42.28	22.57	19.48	40.46	35.8	56.06	50.29	50.02	50.56	27.82	17.86	32.74	32.06